Clupea harengus (Atlantic herring): 105900665
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Entry
105900665 CDS
T09045
Name
(RefSeq) nck-associated protein 5 isoform X1
Organism
char
Clupea harengus (Atlantic herring)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
NCKAP5
Sigma70_ner
Motif
Other DBs
NCBI-GeneID:
105900665
NCBI-ProteinID:
XP_031439185
Ensembl:
ENSCHAG00000008112
UniProt:
A0A6P8GWM8
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All DBs
Position
16:22800168..22993838
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AA seq
2012 aa
AA seq
DB search
MSEWWLHHRAMDTHLHNTAMLKRLSLDSSLTESMDANRCIEELLKQLEEERGIVRREKLA
VACLQREVERTKSEGTMREKLVHQLEEERRLRLDSERRLREVTEESELGRTQMTSLQQHF
SRMEDTVRTLLQNQGVLESSAVDTVDIMKAYKDKLSKEVEKLESSEEKRACQAEQQPAES
SQSEAERDEASRETRDETKDETKDEAQTLLERLKTLEEENSALAMENENQREQYERCLDE
VANQVVQALLTQKDLREECLKLRTRVFDLEHQNRTLSVLFQQKLRPASDLLLQKLYSRLM
DLSSGDLLLDPERTKHLLLTRNTDSPPHELSGKGFLVGKCSSQLSLTASVHAHAYGRSSC
SSSELSLSSACSEFSSGSYTWNDSRSCAKLSSLTWEKRSGLGSSVPGNICAPLEDHFPAR
PKECHILEGLRRLQRRRSKETPSSSSRRPKSAFKDCMNSNEGIYSLGVKAGGLGASKSAP
SGAPAALVVGAKKFVYDSDDADDESAHVASVSVRQRHSVPSKDSGWLCSKKLSHSVSDSL
CSWEGIQESVSSTQEVPSEPPPPYSAQERPEKLLSFINGYLFSRKRCSAPTPTTQMLYEV
SSNETDCALHLSESDDPDDARIKGHLEQMSVARSKDLKRFSRDSDQMHRVRREQVRAQSA
DSRPRPLSLVKDQKISKGVQSEESITTIFDADGQPIKLCETRTSRQNVVPNEAPTKMGPP
DYAELVAQERPSRLRGGNNRNYSVLESPEKPGETHLRGQLTSRTSNSREGSAERLQTQPG
NLQHKLIKPPYSRTNKGHSVPPLINTASPKGTNTKIPATRGKGSPLKVSLGPGTELSGTP
GSTSQEKSSSSPPVKLSRFLKAPNSGQSPKSAPQSGSKLPGKGEWGRSSSSSPHLSRRHL
THMDYGEQPTRDRHFEKAKSELRSPSPPPPPGRTTSLLIRPNYEALPQALKPGGPPPPAP
NTVRGPPPSYQPPSIPTMQHSCPHKDVDSLEVDAGYGTVNPQKLVDNGTHHLQKSSSSNQ
TPTKGLPKRVHTKLYLSSSSPGHVPDHQDSAPKTSQKGAAPSLHTPQKAASQQSTIQTKK
APPTNENGYTPSNKTAGNLQTPVQFPAQDCSEPRCPPHVASHQRSAHNSAEQAAKTRIPV
GLKAFVKSPAALKKSSTIPGKQEKDHINTVSKETASSEGLSQSENAPPPYHLHLPPVRGN
MEPKELPLPQRNSVEESTQTTPPGEGGGMLGDKADRDSRLFKRSISITTKPHLKPALGMN
GAKARSQSFSTNYMEKPNINTTVNADGPGKVRTQIITNTVEKRNSLSRQSSFVEGTQLKT
GTGLPESGSSPSVSRPTQIEGITGSSSHHGLPDRTSRFSAKFDIAAPSPQKEARSLPLSD
RLGLKNSRRPAKVASHPQFESTSFSASSTEVLPQGKGSTVGKQEVMPKNQSTPNQSNPDE
EETVANPLVCSIEEKVMMGIKENVQKIQVLERSNSSEAKQKTGSSLANWFGFRKSKLPAL
NSKKVDSPKGKEDKKELKIGSVLGGRQTKSDKKKDKKKNETQSKESQEFVISDNSNKMNS
IMDHCNIQMGHITNQLQSSTTYIGKDQFVKELLGRTVAKGDSHAASVAAISLARRSGEMK
GEVEIHSDTAILVTQKLTLHGEREDDHAPEPVCQDHMIGSSCQMRTLDSGIGTFPLPDPV
SRQGGRNPPKPEPPGSPEKDEAPGAPALPDSPVSVCYPTIPCSATKVPSCLSEPGQQRAA
NSTAHSLSDHSMPADPAREKKASLLRHPSTSDVIKPKRFSHIEYPSKRTERPVSSNKPVE
RRKNATDQSLPHDRALRVCTYSGSSNDSESEPELECRSEANTLRSPQNTQLNKTNSISQV
GRVEQLKRRSFCGVRSAAECNQQHRGHSGGGGAPCRPRSQYLPRTEHALDYGQTRDNHCK
GKILERVSAIGGPQQGFSRISLESLSCLGGSGGPDRLHRSICGGIGNAGVGTRADPQHTP
ERQASNNHIVSRSDSILYDGFTSCASQGSNIA
NT seq
6039 nt
NT seq
+upstream
nt +downstream
nt
atgagtgagtggtggctacatcacagagccatggacacacacctgcacaacacagccatg
ctgaaaagactgtcactggacagcagcctgacggagtccatggatgccaacagatgcatt
gaggagctgctgaagcaactggaggaggagcgagggatcgtcagacgggagaagctggca
gtggcttgtctgcaaagggaagttgaacgaaccaaaagtgaaggaacaatgcgtgagaaa
ctagttcaccagctggaggaggagcggcgcctgcgattggacagcgagaggcgtctgcgt
gaggtcaccgaggagtcagagctggggcgcacgcagatgacatcactgcagcaacacttc
tccaggatggaggatacagtacgaacgctgttgcaaaaccaaggtgtcttggagtcatca
gcggtggacactgtggacatcatgaaggcttataaggacaagctctcgaaggaggtggag
aagctggagagttccgaggagaagcgggcgtgtcaggcggagcagcagccagccgagagc
agccaatcggaggccgagagagacgaggcgagccgtgagacgagggacgagacgaaagat
gagacgaaagacgaggcccagacgcttctggagagactcaagactctggaggaggagaac
tcagccctggccatggaaaatgagaaccaaagagaacagtatgaacgctgtctagatgag
gtcgccaaccaagtggtgcaggccctcctcactcagaaggatctgcgcgaggagtgtttg
aagctgcgcactcgagtgtttgacctggagcatcagaaccgcacgctgagtgttctcttc
cagcagaaactaaggccagcttcagacctgctgctacagaagctctactctcggctcatg
gatctctccagtggggacctgctgctggacccagagagaaccaaacatctgctgttaacc
aggaacacagactcaccccctcatgagctgagcggtaagggtttcctggtggggaagtgc
tcgagccagctgagcctgactgcgtctgtgcatgcacatgcgtacggccgcagcagctgc
agcagcagcgagctctcgctctccagcgcctgcagcgagttctccagcggctcttacacc
tggaacgacagccgctcctgtgccaagctgtcctcgttgacctgggagaagaggtcaggc
ctcggctcctcggtgcccggcaacatctgcgcccctctggaggatcacttcccagctcgt
cccaaggagtgccacatcctggaaggcctcaggaggctgcagcgccgccggtccaaggag
accccctcctcctcctcccggcggcccaagtcggccttcaaggactgcatgaactccaac
gagggcatctactccctgggggtgaaggctggcggtctgggggcctctaagtccgctccg
agtggcgctcccgctgctctggtcgtgggtgcaaagaagttcgtctacgactcagatgat
gcggacgacgagtcggcacacgtggctagcgtcagtgtccgtcagcgccacagcgtccca
agcaaggacagcggctggctgtgctcgaagaagctttcgcacagcgtgtcggacagcctg
tgcagctgggagggaattcaggagagcgtcagctcaacccaggaagtccccagtgagcct
ccgccaccctacagcgcacaggagcgtcccgaaaagctcctgagtttcatcaacggctac
ctgttcagccggaagaggtgttcggcacccactcccacgactcaaatgctctatgaggtc
agctccaacgagaccgactgcgctctgcacctctccgaatccgatgaccccgatgatgct
cgaattaagggccatttggagcagatgtctgttgcccgatccaaggacctgaagcggttc
tcccgggattcagatcagatgcaccgcgtcaggagagagcaggtgagagcgcagtccgcc
gacagccggcccagacctctgagtctcgtgaaggaccagaagatttcaaagggggtccag
tcagaggaaagtatcacaaccatcttcgacgcagacggccagccaatcaaactctgcgag
acgcgcacatccaggcagaatgtggtgccaaacgaggccccgactaaaatgggaccccct
gactatgcggaactcgtggcacaggagagacccagtcgactgaggggaggcaataacaga
aactacagcgttctggagtcaccagagaagcccggagagactcacctccgagggcagctg
accagcagaaccagcaacagcagggaaggaagtgcagagagactccagacccagcccggt
aacctccagcacaagctcatcaagcccccttacagccgcaccaacaagggacactctgtg
cctccgttgattaacactgctagccccaagggcaccaacaccaagatacctgcaacacgt
ggcaaaggttccccactgaaggtgtccttgggtccgggaacagagctgagtggtacccct
gggtcaacgtctcaggaaaagtcttcctcttcacctccagtcaagctctccaggtttctg
aaagcacctaacagtggacaaagccccaagtcagctcctcaatctggctccaagcttccg
ggtaagggagagtggggtaggagttcttcaagctcgccacacttgtcccgcaggcacctc
actcacatggactatggcgagcagcccactcgagacaggcactttgaaaaagcgaaaagc
gaactcaggtctccctccccaccacctcccccaggccgcaccacctccctgctcatacga
ccaaactacgaggccttgcctcaagcacttaaaccaggaggcccccctccccctgcaccc
aacactgtgaggggccctccacccagctatcagcccccgtctattcccacaatgcagcac
tcgtgccctcacaaggatgtggactctctagaagtggacgcggggtatggtacagtcaac
ccgcagaaattggttgacaatggcacccaccacctccagaagtcttcctcctccaatcaa
acccccaccaaagggttgccaaaacgggtccacaccaaactctacctctcctcctcttct
ccaggccacgtgccggaccatcaggactctgcgcccaaaacttctcaaaagggcgccgcc
ccatctttacacacccctcagaaagcggcgtcgcagcagagtacaatccagaccaagaag
gctcctccgaccaatgagaatggatacacaccatcaaacaagactgctggcaacctgcag
actccggtgcagtttccagcccaagactgttccgaaccccggtgccctcctcatgtggca
tcacaccagcgtagcgcccacaactctgctgagcaagccgcgaagactcgtattcccgtc
ggcctcaaggccttcgtgaagtcccctgcggctctgaagaagagctcgaccattcctggg
aagcaagagaaggaccacatcaacacggtttccaaggagaccgcctcctccgaggggttg
agtcagagcgagaacgcaccgccgccataccaccttcacctgccacccgtcagaggcaat
atggagcccaaagaacttcctcttcctcagcgcaactccgtagaggaaagcacccagacc
acgcctccaggagaaggtggtggaatgttgggggacaaggccgacagggacagccggctg
ttcaagagatccatatccatcaccaccaaacctcacctgaagcctgctcttggcatgaat
ggagcgaaggctcgaagccaaagcttcagcactaattacatggagaaacccaacattaat
accactgtgaacgcagatggtccaggaaaggttcgcacccaaatcatcaccaacacggtg
gagaagaggaactctttgtcaaggcagagctctttcgttgagggcacacaactaaaaaca
ggtactggcttaccagagagtggatcatcaccttccgtctcaaggcccactcagattgaa
ggcattactggttcaagtagccatcatggtctcccagacaggacctcgagattcagcgct
aaatttgacattgctgctccctccccccagaaagaggctcggagcttgcctctctctgat
cggctgggcctaaagaactctcggcggccggcaaaggtagcctcccacccacagtttgag
tccacctctttctctgctagcagcacggaggtgctgccacaggggaaaggctcgacagtg
ggcaaacaggaagtcatgcccaaaaatcagtcaacgcccaatcagagcaatcccgatgaa
gaagagacggtggcaaacccattggtgtgctccatcgaggagaaggtgatgatgggtatc
aaggagaatgtgcagaagatccaagttttggagaggtccaattcctctgaggctaagcag
aaaaccggttcctctctggccaactggttcgggttccggaagagcaagctcccggcacta
aacagcaagaaggtggacagcccgaaggggaaggaggacaagaaggagctgaagatcggg
tcggtgcttggaggtcgtcagacaaagtctgacaagaagaaggacaagaaaaaaaacgag
acgcagagcaaggagagccaagagtttgtcatctcggacaacagcaataagatgaactca
atcatggatcattgtaatattcagatgggacacataacgaaccagctgcagtcatccacc
acctacatcggcaaagatcagtttgtgaaggagcttctgggcaggacggtggcgaagggc
gactcccacgcggcgtcggtggcggccatctcgctggccaggaggagcggggagatgaag
ggggaggtagagatccactccgatacggccatcttggtgacccagaagctgacgttacac
ggggaaagggaggacgaccacgcccccgaacctgtctgtcaggaccacatgatcggctcg
tcttgtcagatgcggaccctggacagcggcatcggcaccttcccgctccctgaccccgtc
agtcgtcagggtggccgaaacccccccaaacccgagcctcccggctccccggagaaggac
gaggcccctggcgcgcctgctctgcctgactcacctgtctccgtgtgctatcccacaatc
ccctgctccgccaccaaagtgccttcgtgtctctcagagcccggccagcagagggcggcg
aacagcacggctcactccctgtccgaccactccatgcctgcagaccccgccagggagaag
aaggcaagccttctgcgccatcccagcacctcagatgtaatcaagcccaagcgattcagt
cacatcgagtacccttccaaacggacagagagacccgtgagcagcaataagccagttgag
aggaggaaaaacgctacggaccaaagcctgccacacgacagagcgctgcgtgtgtgcact
tactcgggcagcagcaatgacagcgagagcgagccagagctggagtgtcggagcgaggcc
aacaccctgaggtctccacaaaacacacagctcaacaaaacaaacagcatcagccaagtc
ggccgagtggagcagttgaagaggaggagtttctgcggcgtgcgctctgcagccgagtgc
aaccagcagcatcgagggcacagcggcggtggtggagcgccatgcaggccccgctcccag
tacctgccgcgcaccgagcacgcgctagactacggccagaccagagacaatcactgcaaa
gggaagattctggagcgggtgtcagccattgggggcccccaacagggcttctcacgcatc
tccctggagtccctcagctgcctgggcggctccggggggcccgaccgcctgcacaggagc
atctgcgggggcatcggcaacgccggcgtggggacgagggccgacccccagcacaccccc
gagagacaggccagcaacaaccacatcgtatcccgtagcgactcgatcctctacgacggc
ttcacctcctgtgccagtcaaggctccaacatagcctag
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