Clupea harengus (Atlantic herring): 105901007
Help
Entry
105901007 CDS
T09045
Symbol
pigs
Name
(RefSeq) GPI transamidase component PIG-S
KO
K05291
GPI-anchor transamidase subunit S
Organism
char
Clupea harengus (Atlantic herring)
Pathway
char00563
Glycosylphosphatidylinositol (GPI)-anchor biosynthesis
char01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
char00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00563 Glycosylphosphatidylinositol (GPI)-anchor biosynthesis
105901007 (pigs)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PIG-S
Angiomotin_C
Motif
Other DBs
NCBI-GeneID:
105901007
NCBI-ProteinID:
XP_012683856
Ensembl:
ENSCHAG00000027485
UniProt:
A0A6P3VXH6
LinkDB
All DBs
Position
10:complement(6466088..6468667)
Genome browser
AA seq
561 aa
AA seq
DB search
MLSMDMEKQRGRNASLAIAAIVVLVGIPLWWRTTETYRAWLPMSQIRELDSLHLHLTVEV
EVVFAQGTLTPDQQKKLPLSQVREQEHHADTETDLKYRYETKYRTATIMEEDALNQPNAA
EADKSLHILSESPCGSVVVYVLPESSTILPEGVGVYVGLKRTALVKFELRKGGAALKDVL
SAIDPEVEQVVQTMSFSHQDIIAALSNRIRLAKVSRESLVDSMRAFKSSPGYEITFSLLN
PSPQSHRLQWDIEGAVQQYIQPLLDKMAVVANFSVDSQILYYAVLGVNPRFDKTASAYTL
SADSLAHVINPVEARLGSNAASSNPVLNFLLYVPDPHHSPLFIRDHRKQEVSSNAFHSPR
WGGIMVYNVNDMYSKDSTFPVDLNIDMSKVMGVFLAQLRLLLGVQQVRPPKGFELQGPGS
AGVTDWELDRLLWSRSVENVATASATITSLSQLLDEIGNIVINDNIAQQVLNAVTSLQAA
IAELEAGNLAFALQYSREAILASECAFFDPSLLHLLYFPDDQKFAIYIPLFLPMCVPILL
SLLKIVSEIRQRRAEKSAKKD
NT seq
1686 nt
NT seq
+upstream
nt +downstream
nt
atgttatcaatggatatggaaaagcaacggggacgtaatgcatctcttgctatagctgcc
atagtagtcctcgtggggattcctctgtggtggagaacaacagagacatatcgtgcttgg
ctgccgatgtcacaaatccgtgaactggattcattgcatctccaccttaccgtggaagtg
gaggtggtgtttgcccagggtacacttacacctgatcaacaaaagaagcttccactgagt
caggttcgtgaacaagagcaccacgcggatactgaaacagatctcaagtatagatatgag
actaaataccgaacagctacgatcatggaggaagacgccctgaatcagccaaatgctgca
gaggcagacaagtccttgcacatcctaagtgagagtccctgtggttcggttgttgtgtat
gttttacctgaatcttctaccatactaccagagggtgtgggagtatatgtgggactgaaa
aggacagcactggtcaaatttgaactcagaaaaggaggagcagcgttgaaggatgttctg
tctgcaatagaccctgaggtggagcaggtggtccagaccatgtccttcagccaccaggac
atcattgcagcgcttagcaaccgcatccggctggcaaaggtcagcagggaaagcctagtg
gacagtatgagggcctttaagtccagtcctggctatgagatcacattcagtcttctaaat
cccagtccccaatcccacaggctacaatgggacattgagggtgctgtgcagcaatacatc
caacctttactggacaagatggctgttgtggcaaatttctctgtggattctcaaattctg
tactatgctgttcttggagtgaatcctcgctttgacaaaactgcgtcagcctacacactc
agtgccgacagtcttgcacacgtcattaacccagtggaagccaggctaggctcaaatgca
gcatcctccaacccagtgctcaacttcctcctctatgtcccagaccctcaccactcccca
ctcttcatccgggatcacaggaagcaggaagtgtcatcaaatgcattccacagtcctcgt
tggggtggcattatggtctataatgtgaatgatatgtacagcaaagactccaccttccca
gttgaccttaacattgatatgagtaaagtgatgggtgttttcttggcacagcttaggctc
ctgttaggggttcagcaggtgcgtccccccaaaggctttgaactccagggcccaggcagc
gcaggagtaactgactgggagctggaccggcttctgtggagccgcagtgtggagaatgtg
gctacagccagtgccacgatcacctctctttcccaactactggatgaaattggtaatatt
gtcatcaatgacaacattgcacaacaagtactcaatgcagtgacatctctacaggcagct
attgctgagctagaggctggaaacttggcctttgctttgcaatacagtagagaagccatt
ttagcatctgaatgtgccttttttgacccgtcattgctgcatctcctgtatttcccagac
gatcagaagtttgctatctacatccccctgttcttgccaatgtgtgtcccgatactgctc
tcactactgaagattgtcagtgagatacggcagaggagggcagagaaaagtgccaaaaaa
gactaa
DBGET
integrated database retrieval system
