Clupea harengus (Atlantic herring): 105913020
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Entry
105913020 CDS
T09045
Symbol
phox2a
Name
(RefSeq) paired mesoderm homeobox protein 2A
KO
K09330
paired mesoderm homeobox protein 2
Organism
char
Clupea harengus (Atlantic herring)
Brite
KEGG Orthology (KO) [BR:
char00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
char03000
]
105913020 (phox2a)
Transcription factors [BR:
char03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain Paired-related
105913020 (phox2a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Homeodomain
Homeobox_KN
Motif
Other DBs
NCBI-GeneID:
105913020
NCBI-ProteinID:
XP_012697485
Ensembl:
ENSCHAG00000010163
UniProt:
A0A6P3WFW0
LinkDB
All DBs
Position
9:29295026..29297580
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AA seq
290 aa
AA seq
DB search
MYKMDGYSYLNSYDSCMAAMEASAYADFSSCSQANSFQYNPIRSGFGPNPACPPLSSASC
TLGALREHQPAPYSTVPYKFFSDPSGLNEKRKQRRIRTTFTSSQLKELERVFAETHYPDI
YTREELALKIDLTEARVQVWFQNRRAKFRKQERAANSKSSGGVGGSSGKKGSGSGEARSS
SEDDESKESSCSPTPDSTASLPTGGSLSPSPGPPGAPQGLKPVSWPPLNPALSPSHNISP
SSQGQELLKAWGSEGAGLGAGLGAGLGVGPFAGVLSSFQRKPNALKTNLF
NT seq
873 nt
NT seq
+upstream
nt +downstream
nt
atgtataagatggatggatactcctacctgaactcctacgactcctgcatggcggccatg
gaggcgtcggcctacgcggacttcagctcctgcagccaggccaacagcttccagtacaac
cccatccggagcggcttcgggccgaacccggcctgcccccctctcagctccgcgagctgc
acgctgggcgccctgcgcgagcaccagcccgccccgtattccacagtgccctataagttc
ttctccgatccgtccggtttaaatgagaagcgcaagcaacggcggatccgcacgaccttc
acgagctcccagctgaaggagctggagcgcgtgtttgcagagacgcactacccggatatc
tacacgcgcgaggagctcgcgctcaagatcgacctcactgaggcgcgtgtgcaggtgtgg
tttcagaaccggagggctaagttccgcaaacaggagcgagctgccaactccaagagttct
ggcggtgtgggcgggtccagcggtaagaagggcagcggttcgggagaggcccgctcttcc
tccgaggatgacgagtccaaggagtcgtcctgcagccccacccctgacagtacggcctcc
ctgcccacagggggcagtctcagccccagcccagggccccccggagccccccagggcctc
aagcctgtcagttggcccccactcaaccctgccctcagcccctcccacaacataagcccc
tcctcccagggccaagagctgttgaaggcgtggggaagcgagggggcggggttaggggcg
gggttaggggctgggctgggggtggggccgtttgcaggtgttctctcctccttccagagg
aaacccaacgccctgaagaccaacctgttctag
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