Clupea harengus (Atlantic herring): 122129555
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Entry
122129555 CDS
T09045
Name
(RefSeq) calpain-2 catalytic subunit-like isoform X1
KO
K03853
calpain-2 [EC:
3.4.22.53
]
Organism
char
Clupea harengus (Atlantic herring)
Pathway
char04141
Protein processing in endoplasmic reticulum
char04210
Apoptosis
char04217
Necroptosis
char04218
Cellular senescence
char04510
Focal adhesion
Brite
KEGG Orthology (KO) [BR:
char00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
122129555
09140 Cellular Processes
09143 Cell growth and death
04210 Apoptosis
122129555
04217 Necroptosis
122129555
04218 Cellular senescence
122129555
09144 Cellular community - eukaryotes
04510 Focal adhesion
122129555
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
char01002
]
122129555
Enzymes [BR:
char01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.22 Cysteine endopeptidases
3.4.22.53 calpain-2
122129555
Peptidases and inhibitors [BR:
char01002
]
Cysteine peptidases
Family C2: calpain family
122129555
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_C2
Calpain_III
EF-hand_6
EF-hand_1
EF-hand_7
Motif
Other DBs
NCBI-GeneID:
122129555
NCBI-ProteinID:
XP_042560430
UniProt:
A0A8M1KD59
LinkDB
All DBs
Position
Unknown
AA seq
700 aa
AA seq
DB search
MTSMAGKLAHLRERDQGVGTNQHAVKFCQQDFQALKHQCLEAGRLFEDDRFPAESRSLGY
NELGPYSPKTHGVVWKRPTELCSNPTFIDGGATRTDICQGVLGDCWLLAAIASLTLEQQV
LARVVPAGQSFDEGYAGIFHFQFWQFGEWVDVVIDDRLPTRDGELLFVHSATGSEFWSAL
LEKAYAKVNSCYEALSGGTTTEGFEDFTGGIAEIYQLNKAPAHLFKIIQKALGLGSLLGC
SIDITSKYETEAVTAQKLVKGHAYSVTGAQVVHVSGREVELIRIRNPWGKVEWIGAWSDG
SREWASVCADERTKLGHVSEDGEFWMSYSDFVGHFSRVEICNLTPDTLVSEEVGHWNSYQ
FGGVWRVGSTAGGCGNNPATFCSNPQFAVRLEDVDDDPLDGEEGCTLLVGLMQRDGRRGL
RLGRQLNTAGFAIYQVPEQYKGRTNVHLGPDVLLRQQAVALSTFINSREVCERFNLPPGE
YIIVPSTFEPHKKGSFVLRVFSEKQAATSEMEDDIDAVVKETEISESDVDPHFKYLFKQI
AGNDSEVSVFELVRVLNKVVSQSKSDLKTDGFSLETGRHIVSLLDKDGSAKLGLTEFHIL
WMKIQKYLDIFKNHDTDGSGTMSSHEMRAALTQAGFKVNSAVLQIIVCRYANAQYAIDFD
CFVGCLIRLEMLFKMFKTLEADGSGKMELDIQQWLCLAIN
NT seq
2103 nt
NT seq
+upstream
nt +downstream
nt
atgacatccatggcaggtaaactagcccatcttagggagagagatcagggagttggcacc
aatcagcatgcagtgaagttctgccagcaagacttccaggccctgaagcaccagtgtctg
gaggcaggacggctctttgaggatgaccgcttccctgctgagagcaggtcgcttggatac
aacgagttggggccatattcccccaagacccatggcgttgtttggaaaagaccaacagag
ttgtgctccaacccaacatttattgatggtggtgcaacaagaacagacatctgccaaggg
gtcctgggtgactgctggctcctggctgctattgcctctttgacccttgagcagcaggtc
ctggcccgtgtggtccctgctggacagagttttgatgagggctatgctgggatctttcat
ttccagttctggcagtttggggagtgggtggatgtggtgattgacgaccgtctgcccacc
agagatggagagctgctgtttgttcactcagcgaccggctcagagttctggagcgccctg
ctagagaaggcctatgctaaggtcaacagttgctatgaggccctgtctggaggcactacc
acagaaggctttgaggacttcactggggggatagcagagatctatcaactgaacaaagct
ccagcacacctcttcaaaatcatccagaaggccctgggcctaggctctctgctgggctgc
tccattgatattaccagtaaatatgagacagaggcagtcactgcacagaaacttgtgaag
ggccatgcatactccgtcacaggtgcacaagtggtacatgtcagtggcagggaggtggag
ctgatccgtatcaggaacccctggggcaaggtagagtggataggggcctggagtgatggg
tcaagagagtgggccagtgtctgtgctgacgagagaaccaaactaggccatgtctcagaa
gacggggagttctggatgtcgtattcagactttgtggggcatttctcccgagtggagatc
tgcaacctgactccagacacgctggtcagtgaggaggttggccactggaacagctaccag
ttcgggggcgtgtggagggtgggctccactgctggaggctgcggaaacaatccagccacc
ttctgctccaacccccagtttgctgtgcgtctggaggacgtggacgatgaccccctggat
ggggaggagggctgcaccctgctggtggggctgatgcagagagacggccgccggggcctc
aggctgggcaggcagctcaacaccgccggcttcgcaatctatcaggttcctgaacagtat
aaggggcgtactaatgtccacctgggccctgatgtactgttgaggcagcaagctgttgct
ttgagcaccttcattaactcccgtgaggtctgtgagcgttttaacctgccacctggggaa
tacatcatcgtcccctccacttttgagccgcataagaaaggaagcttcgttctgcgtgtg
ttctctgagaagcaggctgccaccagtgaaatggaagatgatattgatgctgtagtaaag
gagactgaaatctcagagagtgatgtggatccccattttaaatatctgtttaaacagatc
gctggtaatgattcagaggtgtctgtttttgaactggttcgtgttctgaacaaagttgtt
tcacaaagtaagtctgatttgaagacggatggatttagtctggagactggtcggcatatt
gtcagccttttggataaagatggaagtgccaaactaggcctgactgaattccacattctc
tggatgaagattcagaaatacctggacattttcaagaatcatgacactgatgggtctggt
actatgagctcacatgagatgagggcagcactgactcaagcaggtttcaaagtcaacagt
gcagtgctgcagatcatagtgtgtcgttatgctaacgcacagtacgccatagactttgac
tgctttgtgggttgcctgatcagactggagatgttattcaaaatgtttaaaacccttgag
gcagatggttctggaaaaatggagctggatatacagcagtggttgtgcttggcaatcaac
tga
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