Caldicellulosiruptor hydrothermalis: Calhy_0009
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Entry
Calhy_0009 CDS
T01346
Name
(GenBank) DNA gyrase, A subunit
KO
K02469
DNA gyrase subunit A [EC:
5.6.2.2
]
Organism
chd
Caldicellulosiruptor hydrothermalis
Brite
KEGG Orthology (KO) [BR:
chd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
chd03032
]
Calhy_0009
03400 DNA repair and recombination proteins [BR:
chd03400
]
Calhy_0009
Enzymes [BR:
chd01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
Calhy_0009
DNA replication proteins [BR:
chd03032
]
Prokaryotic type
DNA Topoisomerases
Calhy_0009
DNA repair and recombination proteins [BR:
chd03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
Calhy_0009
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_topoisoIV
DNA_gyraseA_C
Motif
Other DBs
NCBI-ProteinID:
ADQ05775
UniProt:
E4Q9A4
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All DBs
Position
8571..11000
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AA seq
809 aa
AA seq
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MEELDFRIIPVEIQEEMKRSYIDYAMSVIVSRALPDVRDGLKPVHRRILYAMNEIGLTPD
KPYRKSATVVGHVLAKYHPHGDAAVYESLVRMAQDFSMRHPLVDGHGNFGSVDGDPPAAM
RYTEARMSKIAIEMLRDIEKETVDFMPNFDESAKEPKVLPSRFPNLLVNGSQGIAVGMAT
NIPPHNLAEVIDAIVYLLDNENAGLDDIMKIIKGPDFPTGGYIIGKKGIRDAYATGKGKI
IVRAKATIEQTSKGRQRIVVTELPYMVNKARLIEKIAELVHEKRIDGISDIRDESDKEGL
RIVIEIKKDADANVVLKQLYKNTQLQDSFGIIMLALVDNQPKVLTLMDMLNLYIEHQKEV
IVRRTKYDLKKAEERAHILEGLKKALDHIDEIISIIRSSKTVNEAKERLISKFQFTEVQA
QAILDMRLQRLTGLERQKIEEELAELIKMIEYYKNVLASDAMVKEIIKKEILEIKEKYKD
ERRTKIVQDEHEDFEEEELIQEQETVITLTHFGYIKRLPLDTYKSQKRGGRGITGISTRE
EDFVEDVFVTTTHHYILFFTDKGRVFRLRAYEVPEGSRQAKGTAIVNLIQIGKDEKITAT
MAVKDFKEGYLMMCTKNGTIKKVLLSEFENTTKAGKKAITLADDDSLVDVKLTSGNDEIV
LVSSNGYCVVFNENDVRSMGRTAQGVKGMTLEDGDFIVGMEKASDGKYLLCVTENGFGKR
SEIEEYRKTKRGAKGVLTYKVTDKTGSIVDIKMVNDDDEIMICSTEGIFIRLEVSQVPVQ
GRNTQGVKLMRIDSDNIKVSSIARIKVDE
NT seq
2430 nt
NT seq
+upstream
nt +downstream
nt
atggaggagctcgattttaggataattcctgttgagatacaggaagagatgaaacgaagc
tatatagactatgcaatgagcgtcattgtatctcgtgcactcccagatgtgagagatggc
ttaaagcctgttcacagaagaatactttatgcaatgaacgagataggtcttacacctgac
aagccttacagaaaatctgcaacagttgtagggcatgttcttgccaaataccatccgcac
ggcgatgctgctgtgtacgaaagccttgttcgaatggcacaggacttttccatgcgccat
cctcttgttgatgggcatggaaactttgggtcggttgatggtgacccgcctgctgctatg
cgttacactgaagcgcgtatgagcaaaattgctatcgagatgcttcgcgacattgaaaaa
gagacagttgatttcatgccgaactttgacgaatcggcaaaagaaccaaaggttttgcca
tcaaggtttcctaatcttttggtaaatggcagccagggaattgcggttggtatggcaaca
aacataccgcctcacaaccttgcagaagtgatagacgcaattgtgtacctacttgacaat
gagaatgcaggcttagatgacataatgaaaataatcaaaggtcctgattttccaacaggc
gggtatatcataggcaaaaagggtataagggatgcttatgcaaccggaaaaggaaagata
atcgtcagggcaaaagcaacaattgagcagacctccaagggaagacagagaatagttgtt
acagaacttccttacatggtcaataaggcaaggcttattgaaaagattgccgagcttgtt
cacgagaaaaggatagatggaatttctgatataagagatgagtctgacaaagaaggtctt
aggattgtaattgaaataaaaaaagatgcagatgcaaatgtagttttaaaacagctatac
aaaaacactcagcttcaggacagctttggaataatcatgcttgcgcttgttgacaaccag
ccaaaggttttgacgcttatggatatgctaaatctttacattgaacatcaaaaagaggta
attgttagaagaacaaagtatgacctcaagaaagcagaagaaagagctcacattttagaa
gggcttaaaaaagctcttgaccacatagatgagataatctcaatcattaggtcatcaaag
acggtaaatgaggcaaaagagaggctcattagcaaatttcagtttacagaggtccaagct
caagcaattcttgacatgagacttcagcgcttaactggccttgagcggcaaaagattgaa
gaagagcttgcagagcttatcaagatgatagaatattacaaaaacgtgcttgcaagtgat
gcgatggtaaaggaaattataaaaaaagagattttggagataaaagaaaagtacaaggat
gaaagaaggacaaaaatagttcaggacgaacatgaagactttgaggaagaagagctgatt
caagagcaggaaactgtaatcacacttacccattttgggtatataaaacggcttcctctt
gacacgtacaagagccagaaacgaggtggcagaggcatcacaggaatatcaacaagagaa
gaggattttgtagaagatgtctttgtcacaacaacacaccactacattctctttttcaca
gacaaaggaagggtatttcgcttgagagcatatgaagtgccagaaggttcgcgccaggca
aaaggcactgcaattgtcaacctcattcagattggtaaggacgaaaagattacagcaacc
atggctgtaaaggactttaaagaaggttatcttatgatgtgtactaaaaacggcacgata
aagaaggtgcttttgagcgagtttgaaaacacaacaaaagcaggtaaaaaagcaataacc
cttgcagatgatgatagccttgttgatgtaaaactcacatctggaaacgatgagattgtg
cttgtatcgagcaatggatactgtgttgtgttcaatgaaaacgatgtaagaagtatggga
aggactgcacagggtgtaaaaggtatgacgctggaagatggcgattttattgttggaatg
gaaaaggcaagcgatggaaagtatcttctttgcgtcacagaaaacgggtttggcaaaaga
agcgagattgaagagtatagaaaaacaaagcgcggcgcaaaaggtgttttgacatataaa
gttacagataagacaggcagtattgttgatataaagatggtaaacgatgatgatgagata
atgatatgttctacggaagggatatttataaggcttgaggtctctcaagttccagttcag
ggaagaaatacacagggtgtgaaacttatgcgaattgatagcgataatataaaagtttcg
tcaattgcaaggataaaggtagatgaatag
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