Cohnella herbarum: HH215_24270
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Entry
HH215_24270 CDS
T08421
Name
(GenBank) site-specific integrase
Organism
cheb
Cohnella herbarum
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Gene cluster
GFIT
Motif
Pfam:
Phage_integrase
Arm-DNA-bind_4
Phage_int_SAM_3
Motif
Other DBs
NCBI-ProteinID:
QJD85982
UniProt:
A0A7Z2VMZ9
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Position
complement(5690022..5691173)
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AA seq
383 aa
AA seq
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MRGCVSKRGNKWSWVVEMGKNNEGKRRQKSKGGYESKVDAEKALQKVLHELNTDTYVEAT
KDDVKTFFTSWLAQKQMSIRPGTYKTYRWLVNYHIIPQLGQHKMVNLSPQHLVSMYERLG
SGEKRLSPQTINHVHKVLHDGLETAVKWGLLVKNVAHVVKPPAIPKSETKTWTDVELMQF
LEFTMNSRYHIIFLLAATTGMRRGEVLGVKWEDIDLTTGRLCVRRSYTRGVVGHIFQEPK
TVAGIRTIALPQQTVEALKKHRLGLEEDRKKAEKNGTEYNDHGLVVQTRNGFPVSPYFLE
SRWLDLLRKSGLPKIRLHDLRHTHASLLLKAGIHPKAVSERLGHSSIMITLDRYSHLFPT
LQQEAAEKLDDLLKWPQNDHNDL
NT seq
1152 nt
NT seq
+upstream
nt +downstream
nt
atgcgaggttgtgtaagcaaacgcggtaacaaatggtcatgggtggtagaaatgggcaag
aataacgagggaaagcgtcggcaaaagagcaagggtgggtatgaatccaaagtcgatgcg
gagaaggcgctccagaaggttctccacgagctaaacaccgatacttacgtcgaagcgacg
aaggatgacgtaaagaccttcttcacgtcgtggttggcgcagaagcaaatgagcatccgt
cccggtacatacaagacttatcggtggctggtcaattatcatatcatcccgcagcttgga
caacacaagatggttaacctgtcgccacaacatttggtgagcatgtacgagagacttgga
agcggcgaaaagcgtctatccccgcagacgatcaaccacgttcataaggtactgcacgac
ggtttagagacggcggttaagtggggacttctcgtgaagaacgttgcgcatgtggttaag
cccccggcgatccccaagagtgagacgaagacttggacggacgtggaattgatgcagttt
ctagagttcacgatgaacagccgttatcacattatctttttgcttgcggcaacaaccggg
atgcgtcgtggagaagttttaggggtgaagtgggaggatatcgatctaacaacaggtcgg
ctatgtgtccggcgatcatacactcgtggagttgtcggacatatctttcaggaaccaaag
acggtggcgggtatccgaacaatcgcgctgccacaacaaaccgtcgaggcgctcaagaag
caccgtcttggattagaggaagaccgaaagaaggcagagaagaacggaacggagtacaac
gatcacggtctggtagttcagacacgtaacggcttcccggtcagcccatacttcttggaa
tcgcgttggctagacttgctacggaaatcaggtttaccaaagatcaggttgcacgatcta
cggcacactcacgccagtttgctgctaaaagcgggaattcacccgaaagccgttagtgag
cggcttggtcattcatcaatcatgataacattagacagatactcacatttgtttcctaca
ctccaacaagaagcagcagagaaactggatgatttattaaaatggccccaaaatgatcac
aatgacctataa
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