Cohnella herbarum: HH215_24475
Help
Entry
HH215_24475 CDS
T08421
Name
(GenBank) carbohydrate-binding protein
Organism
cheb
Cohnella herbarum
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
F5_F8_type_C
CARDB
CBM_35
CBM_6
CzcE
Trypan_PARP
Motif
Other DBs
NCBI-ProteinID:
QJD86017
UniProt:
A0A7Z2ZPI1
LinkDB
All DBs
Position
complement(5737426..5741256)
Genome browser
AA seq
1276 aa
AA seq
DB search
MLSINESLRKNSVVLLFLAFVLLLSQLTLYPSSTSAAGGPNLTLGKTITASGQSDVYTPN
NVKDGNPATYWESTNNAFPQWVQVDLGANTNIDQVILKLPVGWETRTQTLAVQGSTNGST
FADIVNSAGYVFNPAVANNSVTINFASTNTRYVRLSFTANTGWAAGQISEFEIYGSTSTT
PTPTPTPTPSNVYQAESAALTGGAKVNTDHPGYSGTGFVDGYWTQGATTTFTVNVATASN
YNVTLKYGNANGGAQTISLYVNGTKIRQSSLPNLANWDTWGNKAEIVTLNAGNNTIAYKF
DAGDSANVNLDQIVLDPTTPTPTPTPTPTPTPTPTPTPTPTPTPTPTPTPTPGGNIAPGK
PITASSSIFTFVATNANDNDTNTYWEGGGNPSQLTLDLLANHNITSIVLKLNPGAAWATR
TQTIQVLGHNQNTTTFSNLVSAQTYTFNPSTGNTVTIPVTATVKRLQLNITSNTGAPAGQ
VAEFQVYGTPAPNPDLTITGMSWTPASPLETSAITLNATVSNIGNSGSPASTVNFYLNNQ
LAGSAPVSALAAGQTATVSLNAGTKNAATYAVSSKVDESNAIIEQNDANNSFANPTSLVV
APVPSSDLVATATWNPSNPSAGNTVTLTANLSNQGNIASAGGAHAITLVIKNAAGATVQT
LNGSYNGALAAGQSVNVNLGTWTAVNGSYTVTTTVAVDANEVSIKQANNTSSTSLYSGRG
ANMPFTVIEAELPSNATNGTRLVPNFTIGDYAGEASGRSAVHLDANGEYVEFTLTSPANA
FVLRNAVAENTTGTVSIYADGVNKGKFNVSSKFSYLYASPTTLGRLGYDNSGTKAYWLYE
DAQLMLDQVYPAGTKIKIQKDAGDVSSIYVDMIETENVAPAASNPDPSKYVQVSATKSIE
QALNEFRQDATKKGIFIPAGTWTITNKIFLYGRATEIIGAGPWHTKLTAPQDQSNTDVGF
NIASSANGTTIRDLSAWGNYIYRQDGPGKFIDGNGMQNVTIQNVWAEHFICLYWGVNSSN
NTFRNNRIKNMFADGINMTNGSSYNIIDNNYARATGDDAFALFSAVDAGGSYNVGNKYTN
LTAVATRRAAAFAVYGGSDNLFQNLYGADTLTYPGITISSYSFGYNTLGFGDVDTVFDGI
TLDRTGGDFWTSVGADDKINDYQNFGAIWFYVGDRAFKNIVVKNIDINNSVYFGLMFQTM
YPNALAMQNIRVENVNINNPARFGIKLVVRAEQGQGPAVGSASFTNVKVNNPGITSIYGE
SSSPNFTVNRVSGNNW
NT seq
3831 nt
NT seq
+upstream
nt +downstream
nt
atgttatcgataaacgaatcgcttagaaagaactccgtcgtcctcttgttcttggcattc
gttctactgctatcgcagcttacgctatacccttcctcgacatccgccgcaggcggacct
aacctcactcttggcaaaaccataacggcaagcggccaatccgacgtatatactccgaat
aacgtgaaagacggaaatccagccacatactgggaaagcacgaacaacgcctttccgcaa
tgggttcaagtcgatctgggcgcgaatacgaacatcgatcaggtcattctgaaacttcct
gtcggatgggaaacgcggacgcaaactctagccgtccaaggaagcacgaacggctcgacg
ttcgctgacatcgtaaactccgccggttatgtatttaaccccgcggttgcgaacaactcg
gttacgattaatttcgcctctacgaatacgcgttacgtccgcttgagctttacggcgaat
accggctgggcggcgggacaaatatccgaattcgagatttacggctcgacttcgactacg
ccgactccaactccaactcctacgccttcgaacgtttaccaagccgagtcagcggcattg
actggcggagcgaaagtaaacacggaccatcccggctactcggggacgggattcgtcgac
ggatactggacgcaaggcgccacgacgaccttcacggttaacgtagcgactgcaagcaac
tacaatgtgacgctgaagtacggcaacgcaaacggcggcgcgcagacgattagcctctac
gttaacggaacgaaaatccgtcaatcttcgttgcctaacttggcgaactgggatacatgg
ggcaataaagcagagatcgttactctgaatgccggcaataacacgatcgcctacaaattc
gatgcaggcgactccgccaacgtcaaccttgaccagatcgttttagatccaacgacacca
acacctactcctactcctactcctactcctactccaacacctacacctacacctacacca
acgcctacacctacacctactccaacgcctacgcctggcggcaacatcgctcccggcaaa
ccgattaccgcttcttcctccattttcacgttcgtagctacgaacgccaacgataacgac
accaacacgtattgggaaggcggcggcaatcccagtcagctaacgcttgacctattggcc
aatcacaacattacttctatcgtgcttaaattaaaccctggcgcggcatgggctacgcgg
acccaaacgattcaggtgctcggccacaaccagaatacgacgacattcagtaacctggtt
tcggcgcaaacgtatacgtttaatccgtcgaccggcaacaccgtcacgattccggttacg
gcgacggtgaaacgtctgcagttgaacataacgtccaacaccggggctcccgctggtcaa
gtcgccgagttccaagtttacggcactcccgcacccaaccctgacttaacgattacaggc
atgtcctggacgccggcttccccgcttgaaacaagcgcgattaccttaaacgctaccgta
tcgaacatcggcaactccggttcgcctgcctctacggtaaacttctacctgaacaatcaa
ttggcaggttccgccccggttagcgcgctcgcggcaggccaaacggcaacggtatctttg
aacgccgggaccaaaaacgccgccacgtacgccgtcagctccaaagttgacgagagcaac
gcgatcatcgagcagaacgacgcgaacaatagcttcgcgaatccgacgtcgcttgttgtc
gctcccgttccgagttccgatctcgtcgcaacggcgacatggaatccctctaatccaagc
gccggcaataccgtaaccttaacggcgaatctgagtaatcaaggcaacatcgcttccgcg
ggcggcgctcacgccatcactttggtgatcaagaacgctgccggcgcaaccgtccaaacc
ttgaacggttcctataacggcgcattagcggcggggcaatccgtcaacgtgaatctggga
acttggacggccgttaacggcagctatacggttaccacgacggttgccgtagatgctaac
gaagtaagcattaagcaggcgaacaacacgagctcgacaagcctgtattcgggaaggggc
gctaatatgccgtttaccgttatcgaagcggagctgccttccaatgcgacgaacggaacg
agattggttcctaacttcacgatcggcgactatgccggcgaagcttccggacgttccgcg
gtacacttggacgcgaatggagaatacgtcgagtttacgttgacttctccggccaacgcg
ttcgtcctgcgtaacgccgtggcggaaaacacgacgggaaccgtcagtatttacgccgac
ggggtcaacaaaggcaaattcaacgtatcctccaagttctcttacttgtatgcatcgcct
actacgctaggtcgactaggttacgacaattcgggtacgaaagcttactggctctacgaa
gatgcccagttgatgcttgaccaagtatatccggcgggaacgaagatcaaaattcaaaaa
gacgccggcgacgtctcgtcgatatacgtagacatgatcgagacggaaaacgtcgctccg
gcggcttcaaacccagatccgagcaaatacgttcaagtttcggcaaccaaatccatcgag
caggcgcttaatgaattcaggcaagatgcgactaagaaagggatctttattccagcgggt
acgtggaccatcaccaacaaaatcttcctctacggacgcgcgaccgaaattatcggcgcc
ggtccatggcacaccaagttgacggctccgcaagaccaatccaatacggatgtcggattc
aatatcgcttcaagcgcgaacggcacgaccatccgggatctgtccgcttggggtaactat
atctacagacaagacggaccgggtaaattcatcgacggaaacggcatgcagaacgtaacg
attcagaatgtatgggccgagcacttcatctgcttgtattggggggtcaattcttccaac
aatacgttccgtaacaaccgtatcaaaaatatgttcgccgacggaatcaacatgacgaac
ggttcgtcctacaacattatcgacaacaactatgccagagcaaccggagacgatgccttc
gccttgttcagcgcggtcgatgccggcggttcctacaacgtaggcaacaagtacaccaac
ctaactgccgttgccacaagacgcgctgccgcatttgccgtctatggcggttcggataac
ttgttccagaacctctacggcgccgacacgctgacttaccccggaatcacgatcagcagt
tatagcttcggatacaacaccttaggattcggcgacgtggatacggtattcgacggaatt
acgttggatcggaccggcggagatttctggaccagcgtcggagcggacgacaagatcaac
gattaccagaacttcggagcgatctggttctacgtcggcgatcgggctttcaaaaacatc
gtggtcaaaaatatcgatatcaacaactcggtttatttcggattgatgttccagacgatg
tatccgaatgctcttgcgatgcagaacatccgggtagagaacgtcaacatcaacaatccg
gcccgcttcggcatcaagcttgtcgttagagcggaacaaggccaaggaccggctgtcgga
tcggcaagctttacgaatgttaaagtgaataaccccggtattacatccatctacggcgaa
tcctcgagcccgaactttacggtcaacagggtttccggcaacaactggtaa
DBGET
integrated database retrieval system
