Chitinophaga pendula: KTO58_23055
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Entry
KTO58_23055 CDS
T08407
Symbol
recR
Name
(GenBank) recombination mediator RecR
KO
K06187
recombination protein RecR
Organism
chf
Chitinophaga pendula
Pathway
chf03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
chf00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
KTO58_23055 (recR)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
chf03400
]
KTO58_23055 (recR)
DNA repair and recombination proteins [BR:
chf03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
KTO58_23055 (recR)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
KTO58_23055 (recR)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Toprim_4
RecR_HhH
Toprim
RecR_ZnF
RecR_C
HHH_5
PHF5
HHH
DZR
Med9
Motif
Other DBs
NCBI-ProteinID:
UCJ06521
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All DBs
Position
6184588..6185205
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AA seq
205 aa
AA seq
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MIFSSALIENAVNEFSRLPGIGKKTALRLVLHLLKQDPGQVQQFSDAISRMRQQIKFCRQ
CHNVADEEICTICASHTRNKSVVCVVESIRDVMAIENTQQYNGLYHILGGIISPIDGIGP
DQLNIHSLVERVAQQGIEEIIMAVSPTIEGDTTIYYLSKKLKEYPVKITTIARGIAFGGE
LEYADEMTLARSISNRLPLESYVQK
NT seq
618 nt
NT seq
+upstream
nt +downstream
nt
atgatcttttcttctgcactgatcgaaaatgcggttaatgaattttccaggttaccaggg
atcggtaaaaaaacggccctgcgccttgttttgcacctgctaaagcaagacccgggacaa
gtacagcaattcagtgacgccatctcccgcatgcggcaacagatcaagttctgccgccaa
tgtcataatgtagccgacgaagagatatgtaccatctgcgccagccatacccgtaataaa
tctgtggtatgtgtagtcgaaagcatccgggatgtaatggccatcgaaaatacccagcag
tataacggcctttaccatattctcggagggatcatctcccctatcgatggcatcggcccg
gatcaacttaatattcatagcttggtagaacgggtcgcccagcagggaatagaagagatt
atcatggctgtcagtcccaccatcgaaggagataccaccatatattacctgtccaaaaag
ttaaaagaatacccggtgaagatcaccacgatcgcccgtggcatcgccttcggaggagaa
ctggaatatgcagacgaaatgaccctcgcccgttccatttctaatagattaccattagaa
agttacgtgcagaagtaa
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