Chitinophaga agri: GWR21_07515
Help
Entry
GWR21_07515 CDS
T06416
Name
(GenBank) DEAD/DEAH box helicase
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
chih
Chitinophaga agri
Pathway
chih03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
chih00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
GWR21_07515
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
chih03019
]
GWR21_07515
03009 Ribosome biogenesis [BR:
chih03009
]
GWR21_07515
Enzymes [BR:
chih01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
GWR21_07515
Messenger RNA biogenesis [BR:
chih03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
GWR21_07515
Ribosome biogenesis [BR:
chih03009
]
Prokaryotic type
rRNA helicases
GWR21_07515
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DbpA
ResIII
SNF2-rel_dom
CMS1
Motif
Other DBs
NCBI-ProteinID:
QHS59438
UniProt:
A0A6B9ZAX4
LinkDB
All DBs
Position
complement(1984509..1986245)
Genome browser
AA seq
578 aa
AA seq
DB search
MTTFETLGLQEPILKGIQDLGFIAPTPIQEKAIPVLLGGDRDFVGLAQTGTGKTAAFGLP
LLQQIDVKQRHPQGLILCPTRELCLQITNDLKNFSKHLGDVSIVAVYGGSSIVQQLRDLK
RGVHIVVATPGRLLDIIERKAVNFANVRYVVLDEADEMLNMGFQEDINNILSNTPEEKTT
WLFSATMPQEVRRIAQKYMSDPFELTVGNKNSGNANIEHEYYVVRPREKYAALKRIVDFN
PEIFGIIFTRTKIESQEIAESLIRDGYNADALHGDLTQQQRDKVMKRFREKSLQVLVATD
VAARGIDVDNVTHVINYELPDDVENYTHRSGRTARAGKSGISIAIITGRDTGKIRQIERV
IGKKFTKVDVPDGFAVCEKQLFGLVHKVHNVTVNEEQIEPYLERIFEEFASMSKEEIIKR
FASLEFNQFLEYYQDAPDLNVKEERRSAEGGDRRSSGGKFTRLFINLGSVDDFTRGDMLR
YLCDTSGVRGNKIGRIDLKGVYSFFEVENDVVGKFQETFKKAEYNGRSVRIEMSQDGDKR
RSGGGGRPPREGGSGRRWEGSNSGGAGSSRPGGFRKRY
NT seq
1737 nt
NT seq
+upstream
nt +downstream
nt
atgactacatttgaaactttaggcttacaggagcccattttaaaaggaatccaggacctg
ggatttatcgcacctacgccaatacaggaaaaagctattcctgtgttattgggtggagac
agggactttgtaggtttggcccagacgggtaccggtaagacggcagcatttggcctgccg
ctgttacagcagatcgacgtaaaacaacgccatccgcagggattaattttgtgcccaaca
cgtgaattatgtcttcagatcaccaacgacctgaagaacttcagcaaacacctgggtgat
gtaagtatcgtcgctgtttatggtggttccagcatcgtgcagcagctgcgcgatctgaaa
agaggagtacacatcgttgtagctactcctggtcgtttactcgatatcatcgaaagaaag
gccgttaactttgccaatgtacgctatgttgtactggatgaagcagatgaaatgctgaac
atgggattccaggaagacatcaacaatatattatccaatacgcctgaagagaaaaccacc
tggttattctcggctacaatgcctcaggaagtacgccgcattgcgcagaagtacatgtca
gatcctttcgaactgaccgtaggtaataagaacagcggtaacgctaacatcgaacacgag
tattatgtggtacgcccacgtgagaaatatgcggcactgaaacgtatcgtggatttcaac
cctgagatcttcggtatcatcttcacccgtactaagatcgaatcacaggaaatcgcagaa
tcacttatccgtgatggttataacgctgatgcactgcacggcgatctgacccagcagcaa
cgtgataaagtaatgaaacgttttcgtgagaaatcattacaggtacttgtagcaactgac
gttgctgcccgtggtattgacgttgataacgtaacacacgtaattaactacgaactgcct
gatgatgtagagaactacacgcaccgtagcggtcgtactgcacgtgccggtaaatccggt
atttccatcgcgatcatcaccggtcgtgataccggaaagatccgtcagatcgaaagagtg
atcggtaagaagttcactaaagtggatgtaccagatggtttcgcagtatgtgaaaaacaa
ctgttcggcctcgttcataaagtacacaacgtaactgtaaacgaagagcagatcgaacca
tacctggagcgcatattcgaagaatttgcatccatgagcaaagaagagatcatcaaacgt
ttcgcttccctcgagttcaatcagttcctggaatactaccaggatgcgcctgatctgaac
gtgaaagaagaaagaagatcagctgaaggtggcgaccgcagaagcagcggtggcaaattc
acccgcctgttcatcaacctgggttcagtagatgatttcacccgtggcgatatgttacgt
tacctctgcgacacaagcggtgtacgtggcaacaagatcggccgtattgacctgaaaggt
gtttactccttcttcgaagtggaaaacgacgtggtaggtaaattccaggaaactttcaag
aaagccgaatacaatggtcgcagcgtacgtatcgaaatgtcacaggatggcgataaacgt
cgttccggtggcggtggtcgtcctccacgtgaaggtggtagcggcagacgctgggaagga
agcaacagcggtggtgccggtagtagccgccctggtggtttcagaaaaagatactag
DBGET
integrated database retrieval system
