Chitinophaga agri: GWR21_19450
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Entry
GWR21_19450 CDS
T06416
Symbol
recQ
Name
(GenBank) DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
chih
Chitinophaga agri
Pathway
chih03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
chih00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
GWR21_19450 (recQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
chih03019
]
GWR21_19450 (recQ)
03400 DNA repair and recombination proteins [BR:
chih03400
]
GWR21_19450 (recQ)
Enzymes [BR:
chih01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
GWR21_19450 (recQ)
Messenger RNA biogenesis [BR:
chih03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
GWR21_19450 (recQ)
DNA repair and recombination proteins [BR:
chih03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
GWR21_19450 (recQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
RQC
RecQ-1-like_HTH
Helicase_C
HRDC
RecQ_Zn_bind
ResIII
HTH_45
HTH_40
Motif
Other DBs
NCBI-ProteinID:
QHS61694
UniProt:
A0A6B9ZJX9
LinkDB
All DBs
Position
complement(4908641..4910842)
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AA seq
733 aa
AA seq
DB search
MAVVKVSLIDALREHFGFDSFKGNQEIIIKSILAGKDTFVIMPTGGGKSLCYQLPALMSP
GCALIVSPLIALMKNQVDLVRSYSSKDNVAHFLNSTLSKAQIKKVRTDLLSGKTKMLYVA
PETLTKQENLDFFRELEISFIAVDEAHCISEWGHDFRPEYRRLKEMIDQISENLPIIALT
ATATPKVQSDILKNLSLRDPQVYLSSFNRPNLYYEIRPKRKKDQTIREIVKFIHQHKGKS
GIIYTLNRKTTEELADMLVANNIKAVAYHAGLDAGTRAQRQDMFLHEDVDVIVATIAFGM
GIDKPDVRFVIHYNIPKSLENYYQETGRAGRDGLEGICVCFYSYKDVQKLEHLMRDKPLS
EREMGAQLINETVAYAESSACRRKVILHYFGEKYEESQCDNACDNCRNPKEKIEVKNRVV
IVLDAIRALEERFGTEYVVNIITGKTNPQITTYQHNQLEVFGMGKEFDAHFWNSLIRQMM
LEDLIEKDIEEYGLLKITEKGQQFLKEPYSIMVSLNHQFEEDGGEDEEVGAEAQAAADTV
LFEMLKELRKKVAKEKNLPPFVIFLETSLEDMATQYPTTIQELEKIQGVSKGKAIRYGKQ
FVDVISKYVEENDIVKPDDFVMKSVVNKSGLKVFIIQNIDKKMPLETIARNKELTIPQLL
DEMETIVASGTKLNLDYCLDEELDDYAQDEIMEYFKGCETSSLALAREELIENDYTIEQL
KLMRIKFLVVYGN
NT seq
2202 nt
NT seq
+upstream
nt +downstream
nt
atggctgttgtaaaggtaagtttgatagatgcattacgggaacactttgggtttgattcc
tttaaagggaaccaggaaatcatcatcaagagcattcttgccggtaaagatacttttgta
ataatgccaaccggcggcggtaaatctttatgttatcaattaccggctctcatgagtccg
ggttgcgcgctaatcgtttctccactcattgccttgatgaaaaaccaggtggatctggta
cgttcatacagcagtaaggataatgtggcgcacttcctcaattctaccctgtctaaagca
cagataaaaaaagtaagaactgacctgctgtctggcaagacgaagatgctgtatgtagct
ccggaaacgctgacaaaacaggaaaatcttgacttcttccgtgaactggagatctcattt
attgccgtagacgaggcacactgtatttcagaatggggacatgatttccgtccggagtac
cgtcgtctgaaggaaatgatagaccagatcagtgagaaccttccaatcattgcgctgaca
gcgactgcaacgccgaaagtacagagcgatattctgaagaatctgagcctgcgtgatccg
caggtgtatctgtcttcgtttaacagaccgaacctctattatgagatccgtccgaagcgt
aagaaagaccagactatccgcgagatcgtgaagttcatccaccagcacaagggtaaaagc
ggtattatatatacacttaatcgtaaaaccacggaagaactggcagatatgctggtggcc
aataatatcaaggcggttgcataccacgccggacttgatgcgggtacccgtgcacaacgc
caggatatgttcctccatgaagatgtggacgtaattgtggctacgatcgcgtttggtatg
ggtatcgataaaccggatgtccgatttgtgatacactataatattccaaagagcctggag
aattattaccaggaaacaggacgtgccggtcgtgatggactggaaggtatctgcgtatgc
ttctattcctacaaggatgtacagaaactggagcacctgatgcgggataaaccgttgagt
gagagagaaatgggggctcagctgatcaatgagacggttgcttacgctgaaagctctgcc
tgccggaggaaagtgatccttcactatttcggagagaaatatgaagagtcgcagtgtgat
aacgcatgtgacaactgccggaatccaaaagaaaagatcgaagttaaaaaccgcgtagtg
atcgtactggatgctatccgtgcactggaagagcgctttggtactgaatacgttgttaat
atcattaccggaaagacaaatcctcagatcactacctaccagcataatcaactggaagta
tttggtatgggtaaagaatttgacgctcacttctggaattctcttatccgccagatgatg
ctggaagatctgatcgagaaagatattgaagaatacggcctgctgaagattacagaaaaa
ggtcagcagttcctgaaagaaccgtactctatcatggtatcactcaatcatcagttcgag
gaagacggtggagaagatgaagaagtcggcgccgaagcacaagcagcagcggacaccgtg
ttgtttgagatgctgaaagagcttcgtaagaaggtagcgaaagaaaagaacctccctcct
ttcgtgatcttcctggagacttctcttgaagacatggcaacacaataccctactaccatc
caggaactggaaaagatccagggtgtcagcaaagggaaagcaatccgctacggaaaacaa
ttcgtagatgtgatatctaaatatgtggaagagaatgacatcgtgaaacctgacgatttc
gtcatgaagagcgttgtgaataagagtggactcaaagtattcatcatccagaacatcgat
aaaaagatgccgctggaaacgatcgcccgaaataaggaactcaccatccctcagttgctt
gatgaaatggaaaccattgttgccagtggtactaaactgaatcttgactactgtctggac
gaggaactggacgattatgcccaggatgagatcatggagtatttcaagggctgtgaaact
tccagcctggcactcgcaagagaagaactgattgaaaacgactacaccatcgaacagctg
aaattaatgcgtatcaagttcctggtggtttacggtaactaa
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