Chitinophaga sp. XS-30: FW415_06325
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Entry
FW415_06325 CDS
T06207
Name
(GenBank) bifunctional UDP-N-acetylmuramoyl-tripeptide:D-alanyl-D-alanine ligase/alanine racemase
KO
K01798
Alr-MurF fusion protein [EC:
5.1.1.1
6.3.2.10
]
Organism
chit
Chitinophaga sp. XS-30
Pathway
chit00300
Lysine biosynthesis
chit00470
D-Amino acid metabolism
chit00550
Peptidoglycan biosynthesis
chit01100
Metabolic pathways
chit01502
Vancomycin resistance
Brite
KEGG Orthology (KO) [BR:
chit00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
FW415_06325
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
FW415_06325
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
FW415_06325
09160 Human Diseases
09175 Drug resistance: antimicrobial
01502 Vancomycin resistance
FW415_06325
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
chit01011
]
FW415_06325
Enzymes [BR:
chit01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.1 Acting on amino acids and derivatives
5.1.1.1 alanine racemase
FW415_06325
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.10 UDP-N-acetylmuramoyl-tripeptide---D-alanyl-D-alanine ligase
FW415_06325
Peptidoglycan biosynthesis and degradation proteins [BR:
chit01011
]
Precursor biosynthesis
Amino acid ligase
FW415_06325
Racemase
FW415_06325
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ala_racemase_N
Ala_racemase_C
Mur_ligase_M
Mur_ligase_C
NTP_transf_4
Motif
Other DBs
NCBI-ProteinID:
QEH40508
UniProt:
A0A5B9WIK0
LinkDB
All DBs
Position
complement(1497727..1500219)
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AA seq
830 aa
AA seq
DB search
MYTAESISKILKGELLQQTGSPEIEHILLDSRKLLTAETSLFFPLVSDRRNAHQYMQELY
RKGVSNFVVSEPPPLHEFPHANIILVKHTMQALHTLTAWHRQQFQVPVIGITGSNGKTIV
KEWLFQLLEKDYRIVRSPKSYNSQIGVPLSVWQMNADHQLGIFEAGISQPGEMVNLEKII
RPTIGIFTNIGEAHDEGFLNIRQKVNEKLILFMKSDVLIYCKDYLALNECVNSFHNLVGK
REVDNDLQLLTWSRKTDADLRIVSVDRNESHTRIDALYKQEPLFIRIPFVDEGSIENAIH
CWALMLYLGKPQEVIQERMDHLGNIAMRLELKQGINDCSIINDSYNSDLGSLAIALDFLQ
QQRQHSARTVILSDILQSGKSEATLYEEVAGMLEQKGIQKIIGIGKSIVREKLCFRSLKS
AFYATTEEFLQEFNPADFQHESILVKGARVFQFERISKLLEQKAHQTILEINLSAIAHNI
KAYQATLKPGTKLMAMVKAFSYGSGSYEIASLLQFHGVDYLAVAYADEGVELRRAGITVP
IMVMNPEPTTFDAILQWNLEPELYSMHSLEQFEEVVRYANKTDYPVHIKLDTGMHRLGFE
EQDMPALVQRLKIDGLFKVQSVFSHLAASEDADNDELTRRQGQLFNKMSVNLQTQLGYAV
IRHIANSAAIHRHPELQLDMVRLGIGMYGVDNAGGFQENLRNVSTLKTTVAQLKRIHAGD
TVGYGGKWKAEVPSVIATVRIGYADGYPRRLGNGKGKMLVRQKLAPVAGVVAMDMLMLDV
THIPGVEEGDEVIVFGEELPVQQLAGWAETIPYEILTGISQRVKRVYFQE
NT seq
2493 nt
NT seq
+upstream
nt +downstream
nt
ttgtacacagcagaaagtatcagcaagatcctgaagggtgaattgttgcagcagacgggg
agtccggagattgagcatattttgctggacagccgcaaattgttaacggcagaaacttct
ttgttctttccccttgtcagcgaccgccggaatgcgcaccaatacatgcaggaactttac
cggaaaggcgtcagcaactttgtggtcagcgaaccgcctccgctgcacgaattcccgcat
gccaacatcatcctggtaaaacataccatgcaggcgctgcacaccctcacggcctggcat
cgccagcagttccaggtgccggtgatcggtatcacggggagcaatggcaagaccatcgta
aaagaatggctttttcagctgctggaaaaagattaccgcatcgtccgcagcccgaaaagc
tacaattcgcagatcggcgtaccgctttccgtatggcagatgaatgcggaccatcagctc
ggtatctttgaggccggtatttcccagcccggcgaaatggtgaacctggaaaagatcatc
cggcccaccatcggcatcttcaccaatatcggcgaagcccatgacgaaggctttctgaac
atccgccagaaagtgaatgaaaagctcatccttttcatgaaaagtgatgtgctgatctat
tgcaaggattatctggcgctcaacgaatgcgtcaacagtttccataacctggttggtaaa
cgggaagtggataatgatctgcaattgctgacctggagccggaaaacggatgcagacctt
cgtattgtcagtgttgacaggaacgaaagtcacacccgcatagatgcgctttacaaacag
gaaccgctgttcatccgtattccctttgtggatgagggttccatcgagaatgcgatccac
tgctgggcgctcatgctttacctcggcaaaccgcaggaagtgatccaggaacggatggac
catcttggcaatatcgccatgcggctggaattgaaacagggcatcaacgattgcagcatc
atcaatgacagctataattcagacctcggatcactggccattgcgctggacttcctgcag
cagcagcggcagcattcggcccgcacggtgatcctgagcgacatcctgcagagcggcaaa
agcgaagccactttatacgaagaagtggcgggcatgctggaacaaaaaggcatccagaag
atcatcggcatcggaaaaagcatcgtccgcgaaaagctgtgcttccgtagcctgaagagc
gccttttatgccaccaccgaagaattcctgcaggagttcaacccggcggacttccagcat
gagtccatcctcgtgaaaggcgccagggtattccagttcgagcggatcagcaagctgctg
gaacagaaagcccatcagaccatcctcgagatcaatctcagtgccattgcgcataatata
aaagcataccaggccacgctgaaacccggcacaaagctgatggccatggtaaaagccttc
tcttacggcagcggcagttacgagatcgcgagcctgctgcagttccacggcgtggattac
ctggccgtggcatatgcggatgaaggtgtagaactgcgccgcgcgggcatcacggtaccg
atcatggtcatgaacccggaaccgaccacttttgatgccattctgcaatggaacctggaa
ccggagctgtattccatgcacagcctggaacaattcgaagaagtagtacgttatgccaat
aaaacggattatcccgtacacatcaagctggatacgggcatgcatcgcctcgggtttgaa
gaacaggatatgcccgcactcgtacagcggctgaaaatagacgggctgttcaaagtgcaa
tccgtattcagtcacctcgccgccagcgaggatgcggataatgatgagcttacccgcagg
cagggccagctgttcaataaaatgagcgtgaacctgcagacacagctgggttatgccgtg
atccgccatattgccaacagcgccgccattcaccggcatccggagctgcaactggacatg
gtaaggctggggatcggcatgtacggggtggacaatgcgggcggattccaggagaacctg
cggaatgtaagcacgctgaaaacaacggtggcgcaactgaaacgcatacacgcgggagat
actgtcggatacggcgggaaatggaaagccgaagtgccttccgttattgcgaccgtccgc
atcggctatgccgacgggtaccccaggcggctgggcaacggtaaaggcaaaatgctcgtc
cggcaaaagcttgcccctgtggcgggagttgtggccatggatatgctcatgctggatgtg
acccacattcccggcgtagaggaaggtgatgaagtgatcgttttcggagaagagctgccc
gtacagcagctggcgggatgggcggaaaccattccctacgaaatactcaccggtatatcc
caacgcgtaaaaagggtgtatttccaggaataa
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