Chryseolinea soli: D4L85_06840
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Entry
D4L85_06840 CDS
T05641
Name
(GenBank) RNA polymerase sigma-70 factor
KO
K23514
RNA polymerase sigma-19 factor, ECF subfamily
Organism
chk
Chryseolinea soli
Pathway
chk02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
chk00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
D4L85_06840
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
chk03021
]
D4L85_06840
Transcription machinery [BR:
chk03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
D4L85_06840
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4_2
Sigma70_r2
Sigma70_ECF
Sigma70_r4
GerE
DUF6241
HTH_5
HTH_24
HTH_11
HTH_23
TnsD
MarR
Motif
Other DBs
NCBI-ProteinID:
AYB30324
UniProt:
A0A385SHC1
LinkDB
All DBs
Position
complement(1609912..1610490)
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AA seq
192 aa
AA seq
DB search
MEISVDQLITTLKSGDITAFEMLFRTYYQPLCNYAYTFVQDRDEAEEIVQSTFLNVWEKR
DNLSIHTGVKPYLYAMVRNASLNVLKHEKIKQQHVTMEMAVAERSVESVTRTVMASELET
KIYKAMDKLPEQCRLVFKLSRFEELKYSEIAEQLNISIKTVENQMGKALKIMRDQLKDYL
PLLIVLMNGFLN
NT seq
579 nt
NT seq
+upstream
nt +downstream
nt
gtggagatatcggtagaccagcttataacaacgctgaaatcaggagatataactgccttt
gagatgctattccgaacctactaccaacccctctgcaactacgcatacaccttcgtccag
gaccgcgacgaagccgaggaaattgttcaatccacctttctcaacgtctgggaaaaacgc
gataatctctccatccacaccggcgtgaaaccttatctctacgccatggtgcgcaacgcc
agcctcaacgtactgaaacacgaaaagatcaagcagcaacacgtgaccatggaaatggcc
gtggccgagcggagcgtggaatcggttacccgcacggtgatggcgtcggaactggaaacc
aaaatatataaggccatggacaaactgccggaacaatgccggctggtgttcaaattgagc
cgcttcgaagaattgaaatactcggagatcgccgagcaactgaatatttccatcaaaacg
gtggaaaatcaaatgggaaaagcattgaagatcatgcgcgaccaactgaaggactatctt
cccctgctgatcgtgctgatgaacggatttttaaactaa
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