KEGG   Chryseolinea soli: D4L85_06840
Entry
D4L85_06840       CDS       T05641                                 
Name
(GenBank) RNA polymerase sigma-70 factor
  KO
K23514  RNA polymerase sigma-19 factor, ECF subfamily
Organism
chk  Chryseolinea soli
Pathway
chk02020  Two-component system
Brite
KEGG Orthology (KO) [BR:chk00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   02020 Two-component system
    D4L85_06840
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:chk03021]
    D4L85_06840
Transcription machinery [BR:chk03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Sigma factors
     D4L85_06840
SSDB
Motif
Pfam: Sigma70_r4_2 Sigma70_r2 Sigma70_ECF Sigma70_r4 GerE DUF6241 HTH_5 HTH_24 HTH_11 HTH_23 TnsD MarR
Other DBs
NCBI-ProteinID: AYB30324
UniProt: A0A385SHC1
LinkDB
Position
complement(1609912..1610490)
AA seq 192 aa
MEISVDQLITTLKSGDITAFEMLFRTYYQPLCNYAYTFVQDRDEAEEIVQSTFLNVWEKR
DNLSIHTGVKPYLYAMVRNASLNVLKHEKIKQQHVTMEMAVAERSVESVTRTVMASELET
KIYKAMDKLPEQCRLVFKLSRFEELKYSEIAEQLNISIKTVENQMGKALKIMRDQLKDYL
PLLIVLMNGFLN
NT seq 579 nt   +upstreamnt  +downstreamnt
gtggagatatcggtagaccagcttataacaacgctgaaatcaggagatataactgccttt
gagatgctattccgaacctactaccaacccctctgcaactacgcatacaccttcgtccag
gaccgcgacgaagccgaggaaattgttcaatccacctttctcaacgtctgggaaaaacgc
gataatctctccatccacaccggcgtgaaaccttatctctacgccatggtgcgcaacgcc
agcctcaacgtactgaaacacgaaaagatcaagcagcaacacgtgaccatggaaatggcc
gtggccgagcggagcgtggaatcggttacccgcacggtgatggcgtcggaactggaaacc
aaaatatataaggccatggacaaactgccggaacaatgccggctggtgttcaaattgagc
cgcttcgaagaattgaaatactcggagatcgccgagcaactgaatatttccatcaaaacg
gtggaaaatcaaatgggaaaagcattgaagatcatgcgcgaccaactgaaggactatctt
cccctgctgatcgtgctgatgaacggatttttaaactaa

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