Chitinophaga horti: MKQ68_00495
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Entry
MKQ68_00495 CDS
T09154
Name
(GenBank) PKD domain-containing protein
Organism
chor
Chitinophaga horti
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PKD_4
PKD
CHU_C
ChitinaseA_N
Ig_7
He_PIG
DUF4625
Motif
Other DBs
NCBI-ProteinID:
UYQ93579
LinkDB
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Position
complement(115504..120360)
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AA seq
1618 aa
AA seq
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MENQQPQTLRNRYIHRVLLLAMIVLCAHRTVGQTVDFTADKFSGCVPLTVSFSNLSDPGA
VSYNWNFGLGAAVPEKDPAKIFTVAGTYNVVLTVTYPGNIVKTATKTITVYEAPTAVFTT
SPLSGCTPLTVSFTDQSTPGSGTIARVLWDFGDGVTSETANPAHTYTLPGNYTVGSIVTN
SFGCTSGYTLPTPVKVQSTPVADFTASPTSGCTTPMTVNFTSSAPAGVTYNWDFGDAAAG
SANNSSLANPSHTYTSEGSYTVTLTATTSEGCAAVVTKSNLVVIRSTVADFTFSNSCVGS
AVQFTNTTTPAPTVATWFFPDGSSQTGINASKVFTAPGNYQVTLVSGTPGCTQTTIKTIT
IAAKPAVDFSATPITGCNVPFTTQFNALAPGSTQYRWTFGDNTTSTTANPEHTYNAEGDY
TVKLWAANAQGCADSITKPAYIRVRRPTIVLSAAPPEGCIPFNTTLSANITNGGAVTGYQ
WDFGDGATSTAATPAHTYTTEGSFNVKVVITFAGGCKDSSSIPVRAGNIPVVQFDADPKI
TCAATPVQFTNQSTPRGTSWSWLFPEDNGVSSQENPLYTFRNEGLHDVTLIVNNYGCIRS
LTKTDFITIQPPIASFTRATSCTDKFLVQFTDNSDFGDAPTTRNWSWDFGDRQTSTEQSP
AHRYAAAGFYRVTLTVSNGTCQHTFTGSVRVIDEQPVISANATTICAGGTITFTRSNIND
SNIASFSWNWNDNTSTQTRNLTWNKRYSTPGVYNVVLTVLDSNNCRTASTPLTITVNGPK
ADFTYTGRNCKGDEQRFSDNSAANNGNALTQWVFDYGDGSKPDTFTTKPVSIAHAFANAG
NYNVRLTVTDASGCSTTIAKAVSVIGVKAVIGRNASVVCLNSSMGFNSTSSQGGPLTYLW
SFGDGTTSTEAHPGKRYDTAGLFDVSLTVTNAIGCTDTQSEADYILVPNPKAAFTLPANL
ANCPPVLVQLTNESTGSNRVIWDFGDGSRSVIANASHVYTLPDTYTIKLFAYAEGNCVDS
TSQQVEIKGPRGTRTITDKTGCAPQTVSFSATSANAVKYIWDYDDGTVQTTTTPASSHSY
TREGLYFPRVVLEDAQGCQVIAQGPADTVLIEQVKASFTATPSVICDAGEMRVADMSAGL
TKDLLGQAFRYQWDFGVPGRTNDVATTPNAVFRYEQFGTYEVKLKVTSAIGCVDSATTSI
RVDEKPNGNIASRTAICPGDTITFNGSDAKNLPNTEWNWQYSGKNYPNLRSLSLNFPEAG
LFEIKLIIKNQEGTCSDTSVMNLRVNPKPALAATPKNVTVCRGQSIQLNANVPESQVTWT
NYRISNVNSQTPIVDPVTDTLYHVVAVNQFGCFSEDNVRIAVTQPHEIRTGDATICEGNV
TQLAVTGNATRYQWLPSPTINRTDVLTPLVNPTVTTRYAVVGYGEDACFTDTAWATVTVN
PKPKLVTGGDRTVPAGSVVPLNIQSSPDVITWKWSPAKYLDCYDCPQPTATPRENITYNV
LATNVYGCTSTEEIAIRLQCLNSVTFLPNSFSPNGDGQNDVFYVRGRGVKSVRTFRIFNR
WGELVFERANFNIDDIAFGWDGRHAGQLLVPDVYVYYVQAVCDNNEPLLLKGNVTLLR
NT seq
4857 nt
NT seq
+upstream
nt +downstream
nt
atggaaaaccagcagccgcaaacgctgcggaaccgctatatacaccgagtattactactg
gctatgatcgtgctatgcgctcatcgtactgtagggcaaactgtagattttactgcagat
aaattctcaggttgtgtaccgctaaccgttagcttcagcaatttatccgatcccggggca
gtcagttacaactggaacttcgggctgggcgcagccgttcccgaaaaagatcccgccaag
atattcacggtggcaggcacgtataacgtagtcctcaccgttacctaccccggcaacatc
gtcaaaaccgctaccaaaacaatcaccgtatacgaggcccccacggccgttttcaccact
tcgcccctaagcggctgtacccccctcaccgttagtttcaccgaccaatccactcccggc
tccggcaccattgcccgcgtactttgggactttggagatggcgtaactagcgaaacggcc
aaccctgcgcatacgtatacactaccgggcaactacacagtaggcagcattgtaaccaac
agtttcggctgtacgtcgggttatactttacctacgccggttaaggtacaatccaccccg
gtagccgactttaccgccagtccgaccagcggttgcaccacgcctatgacggttaatttt
acctccagcgcccccgccggtgttacctacaactgggactttggcgatgcggcagctgga
agcgctaataacagttcattagcaaatccgtcgcacacttatacaagcgagggcagctat
accgtaacactcaccgccacgacttctgagggttgtgcagccgttgtcaccaaatcaaac
ctggtggttatccgcagtacggtcgccgattttaccttcagcaacagctgtgtgggatcg
gcggtgcagttcaccaataccaccacgcccgcccctaccgtcgctacctggttcttcccg
gatggcagctcgcaaacgggcattaacgccagtaaagtctttacagcaccgggtaactac
caggtaacgctcgtatccggaacgcctggctgtacgcaaacgacgatcaaaacaattacc
attgccgccaaacctgcggtggacttttccgctacacctattacaggttgtaacgtgccg
tttacgacgcaattcaacgcgctggcacccggcagcacacaataccgctggacgttcggt
gacaacaccaccagcaccaccgcgaatccggagcatacttacaatgccgaaggcgattac
acggtaaagctgtgggcagccaatgcacagggctgcgcggactctatcaccaaacctgct
tacatccgcgtgcgccggcccacgatcgtactcagcgccgcaccgcctgaaggctgtata
cccttcaacacgaccctcagcgccaacattacgaacggcggtgcagttacggggtaccaa
tgggactttggcgatggcgctacatcgacagcagccactcctgcccatacttacaccacc
gaggggtcctttaacgtgaaagtggtgattaccttcgccggtggctgtaaagactccagc
tccatccccgtgagggcaggtaatataccggtagtacaattcgatgcagatccgaaaata
acatgtgccgctacgccggtacagtttaccaatcaatccacccccaggggcaccagctgg
agttggctattcccggaagataacggggtcagctcgcaggaaaacccactgtacacgttc
aggaatgaggggctgcacgacgtaacgctgatcgtcaacaactacggttgtatccgatcg
cttaccaaaacagacttcatcacgatacagccgcctatcgcttcgtttacgagggccacc
agctgtacagacaagtttttggtacagttcaccgacaactctgattttggcgatgcccct
actacccgcaactggagttgggactttggagaccgacaaacatctaccgaacagtctccc
gcgcaccgttacgctgccgctggattctaccgcgtaacgctcaccgtaagcaatggaacc
tgtcagcacacctttaccggcagcgtgcgcgtaatcgacgagcagccggtgatcagcgcc
aacgcgactacgatctgtgcaggtggtacgatcacctttacccgcagcaacatcaacgac
agcaacatcgccagcttctcctggaactggaacgacaataccagcactcaaacgcgtaat
cttacctggaacaaacgttacagcacgccgggcgtttacaacgtagtacttacggtactc
gacagcaataattgccgcaccgcttccaccccgcttactatcaccgtaaacggaccaaag
gccgatttcacttacaccggcaggaactgtaaaggcgatgagcagcgtttcagcgacaat
tcggccgctaacaacggtaacgcccttacgcagtgggtattcgattatggcgacggatcg
aagcccgacaccttcaccaccaaaccagtcagcatcgcgcacgcgtttgcaaatgcgggc
aactataacgtacgactcaccgtgaccgatgcttccggttgtagtaccaccatcgctaaa
gcagtatccgtaatcggggtgaaagccgtgatcggccgcaatgcatcagtggtttgtctt
aattcttctatgggctttaacagcaccagttcgcagggaggcccgctcacttacctgtgg
agctttggcgatggcaccacatccaccgaagcacacccgggcaaacgctacgacactgcc
ggtttgttcgacgtgtccctcacggtgactaacgcgatcggttgtacggatacacagtcc
gaagcggactatatcctggtgccgaatccgaaggcagcctttaccctgccggcaaacctg
gctaattgtccgcccgttctggtacaactcaccaacgaaagcaccggcagcaaccgcgtg
atctgggactttggggatggcagccgctctgtgatcgccaatgcttcgcacgtatacacc
ctgcccgacacctacacaatcaaactatttgcttatgcagaagggaattgtgtggatagt
accagccagcaggtggagatcaaaggtccgcgcggaacccgcaccatcactgataaaaca
ggttgcgcaccgcagaccgtgagcttctccgccacctctgctaacgcagtaaaatacatc
tgggactatgatgacggtaccgtgcaaaccaccactactccggccagttctcacagctac
acccgggaaggattgtatttcccgcgcgtggtactggaagatgcgcagggttgccaggta
attgcccagggcccggccgacacggtgctgatcgagcaggtgaaagcatcatttaccgct
acgccttctgtgatatgcgacgcgggtgaaatgcgtgtggcggacatgagtgcgggtctt
acaaaagatttactcggacaggctttccgctaccagtgggacttcggggtgccgggtcgt
acgaacgatgtggccaccacgcccaatgcggtgttccggtacgagcagttcggtacttat
gaagtgaaactgaaagtgaccagcgccatcggttgtgtggacagtgcaacaacgtctatc
cgggtagatgaaaaaccgaatggcaatattgcttcgagaacagctatttgtcctggcgac
accatcacctttaacggcagtgatgcgaaaaacctgcctaatacggagtggaactggcag
tatagcggtaaaaattatcctaacctgagaagcctgagcctgaacttcccggaagctggt
ctgttcgaaataaaactgatcatcaaaaaccaggaaggcacctgttctgacaccagcgtg
atgaacctgcgcgtaaacccgaaaccagcgctggccgccacgccgaaaaacgttaccgta
tgtcgcggccagtcgatccagcttaacgcgaacgtaccggaaagccaggttacatggacg
aactaccgcatctccaacgtaaacagtcaaacaccgatcgttgatccggttaccgatacc
ttgtaccatgtagtagccgtgaaccagtttggttgtttcagtgaagacaatgtacgcatt
gcggttacgcagccgcatgaaatacgtaccggcgatgcgaccatttgtgaaggaaatgtg
acgcagttggccgttacgggcaatgccacccgttaccagtggctgccgtcaccgaccatt
aaccgtaccgacgtacttacgccgctggtaaacccaaccgtaactacccgttacgccgtg
gttggttatggcgaggacgcctgtttcaccgacactgcctgggccaccgtaacggtaaac
cccaagccgaaactggtaactggcggtgatcgcaccgtgccggcaggctccgtcgttccg
ctcaacatacaaagcagtccggatgtcattacctggaagtggtcacccgcgaagtacctc
gattgttacgattgtccgcaaccgaccgccacgccacgcgaaaacattacttacaatgtg
ttggccacgaacgtctacggctgtacgagcaccgaggaaattgcgatccgcctgcaatgc
ttaaacagcgttaccttcctgcctaactccttctcaccgaacggcgacgggcagaacgac
gtgttttacgtacgcggccgcggtgtgaaatccgttcgcaccttccgcatctttaaccgt
tggggcgagctggtatttgagcgcgcaaacttcaacatcgacgatattgcttttggatgg
gatggcaggcatgccgggcagctgttggtgcccgatgtgtacgtgtactatgtgcaggcc
gtttgcgacaataacgagccgctgttattaaaggggaacgtgacattactgcgttaa
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