Chitinophaga horti: MKQ68_18225
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Entry
MKQ68_18225 CDS
T09154
Name
(GenBank) DNA polymerase III subunit gamma/tau
KO
K02343
DNA polymerase III subunit gamma/tau [EC:
2.7.7.7
]
Organism
chor
Chitinophaga horti
Pathway
chor03030
DNA replication
chor03430
Mismatch repair
chor03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
chor00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
MKQ68_18225
03430 Mismatch repair
MKQ68_18225
03440 Homologous recombination
MKQ68_18225
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
chor03032
]
MKQ68_18225
03400 DNA repair and recombination proteins [BR:
chor03400
]
MKQ68_18225
Enzymes [BR:
chor01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
MKQ68_18225
DNA replication proteins [BR:
chor03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
MKQ68_18225
DNA repair and recombination proteins [BR:
chor03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
MKQ68_18225
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta2
AAA
DNA_pol3_gamma3
RuvB_N
AAA_22
AAA_14
AAA_5
TIP49
AAA_18
AAA_24
AAA_30
AAA_7
AAA_2
Rad17
RNA_helicase
AAA_19
nSTAND3
AAA_16
Mg_chelatase
DNA_pol3_delta
Sigma54_activ_2
Pribosyl_synth
SRP54
AAA_33
Motif
Other DBs
NCBI-ProteinID:
UYQ92026
LinkDB
All DBs
Position
4539536..4540681
Genome browser
AA seq
381 aa
AA seq
DB search
MENFIVSARKYRPQNFSTVVGQAHITTTLKNAIRNSQLAHAFLFCGPRGVGKTTCARILA
KTINCETPLADGEACNSCQSCQSFNDGASFNIHELDAASNNSVDDIRTLVEQVRFAPQAG
KYKIYIIDEVHMLSSSAFNAFLKTLEEPPSYAIFILATTEKHKILPTILSRCQIFDFKRI
TIQDTVDHLKEIVEKEHISAEGDALHLIAQKTDGCMRDSLSTLDKIVSFTAGQLTYQNTL
EHLNILDYDYFFKVMDCVMQQDVAGALLIFDEILQKGFEGDNFLGGWAEFLRNLLVCKDE
KVLHLMEVSANLKDRYKQLSAKVSPQYLITALHLLNETEINYRMARNKRLHVEMALIKLC
YLQQAVTLVSNDQNGEVLKKT
NT seq
1146 nt
NT seq
+upstream
nt +downstream
nt
atggaaaatttcatcgtatcagcaaggaagtatcgccctcagaatttctcaacagtagtg
ggccaggcccacattaccacgacattaaagaatgccatccgcaacagtcagctggcgcat
gcgttcttgttctgcggtccgcggggcgtgggtaaaaccacctgtgcgcgtatcctggcc
aaaacgatcaactgcgaaacgcccctggccgacggcgaagcctgtaacagctgccagagc
tgccagtccttcaacgacggcgcttccttcaacattcacgagctggatgccgcttccaat
aactcggtagacgatatccgtacgctggtggaacaagtacgctttgcgccacaggcaggc
aaatacaagatctatatcatcgatgaggtgcacatgctcagttcctcggcctttaacgcc
ttcctgaaaacgctggaggaaccgccctcctacgcgatcttcatcctggccaccaccgag
aaacataagatcctgcccactatcctcagccgatgccagatattcgacttcaaacgtatc
accatacaggacacggtcgaccacctgaaagagatagttgagaaagaacacatctccgca
gaaggcgacgccctgcacctgatcgcgcaaaaaaccgatggttgtatgcgcgactcgctc
agcacactggacaagatagtaagtttcactgcgggccaactgacataccaaaataccctc
gagcacctgaacatcctcgactatgactatttcttcaaagtgatggactgtgtgatgcaa
caggatgtagccggcgcgctgctcatcttcgacgagatattacagaaaggcttcgaaggc
gacaacttcctgggcggctgggcagagttcctgcgcaacctgctggtgtgtaaagacgaa
aaagtgttacacctgatggaagtatccgctaacctgaaagaccgttacaagcagctgtct
gccaaagtgagccctcaatacctgataacggcccttcatttgctgaatgagaccgagatc
aactaccgtatggcgcgcaacaaacgcctgcacgtggaaatggcgctcatcaaactttgt
tacctgcaacaagcagtaaccctggtgagcaacgaccagaacggtgaggtgttaaaaaaa
acttaa
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