Chromobacterium phragmitis IIBBL 112-1: DK842_08970
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Entry
DK842_08970 CDS
T05549
Name
(GenBank) sigma-54-dependent Fis family transcriptional regulator
KO
K02667
two-component system, NtrC family, response regulator PilR
Organism
chri
Chromobacterium phragmitis IIBBL 112-1
Pathway
chri02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
chri00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
DK842_08970
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02022 Two-component system [BR:
chri02022
]
DK842_08970
02035 Bacterial motility proteins [BR:
chri02035
]
DK842_08970
Two-component system [BR:
chri02022
]
NtrC family
PilS-PilR (type 4 fimbriae synthesis)
DK842_08970
Bacterial motility proteins [BR:
chri02035
]
Pilus system
Twitching motility proteins
DK842_08970
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Response_reg
Sigma54_activ_2
HTH_8
HTH_50
AAA_5
cREC_REC
HTH_28
HTH_30
Mg_chelatase
Motif
Other DBs
NCBI-ProteinID:
AXE30013
LinkDB
All DBs
Position
1885638..1886954
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AA seq
438 aa
AA seq
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MTKTLRVLIVDDEPDIRELLELTLLKMGLAPVCAANVAEAKAALDGGGFDLALTDMRLPD
GDGLDVVNHIGERGLDLPIAVITAHGSADNAVRAMKAGAFDYLQKPVSLAQLRSLVKSAL
KVEVPSARPSARQRLLGESPAIQEVLRLAEKLSRSQAAVSIGGESGTGKEQAARLIHELG
PRADKPFVAVNCGAIPESLMESEFFGYRKGAFTGADADRDGFFQLAQGGTLFLDEVAELP
LAMQVKLLRAIQEKAVRKLGASQEEAADVRIICATHRDLAARVEAGQFRQDLYYRLNVLP
LRMPPLRELRDDIPLFADRLLQRFGGASAPRLTADARRALQDHAYPGNFRELENILERAV
ALAASPSLSRDDLQLTPCVEYSPEPGSGEPLQDYLDRVEREAIVKALEGTRYNRTQAAKK
LGVTFRSLRYRMERLGVK
NT seq
1317 nt
NT seq
+upstream
nt +downstream
nt
atgactaagactctgcgcgtattgatcgtcgacgacgagccggacatccgggaactcttg
gagctgacgctgttgaaaatgggcctggctccggtttgcgccgccaacgtggccgaggcc
aaggccgcgctcgacggcggcggcttcgacctggcgctgaccgacatgcggctgccggac
ggagatggcctggatgtggtcaaccatatcggcgaacgcgggctggacctgcccatcgcc
gtgatcaccgcccatggcagcgccgacaacgcggtgcgggcgatgaaggccggcgccttc
gactacctgcaaaagccggtcagcctggcgcagttgcgcagcctggtgaagagcgcgctg
aaagtggaggtcccgtctgccagaccatccgcgcggcagcggttgctgggcgagtcgccg
gcgatacaggaggtgttgcggctggcggaaaagctgtcgcgcagccaggcggcggtgtct
atcggcggcgaatccggcaccggcaaggaacaggcggcgcggctgatccacgagctgggg
ccgcgcgcggacaagcccttcgtcgccgtcaactgcggcgcgatcccggaaagcctgatg
gagagcgagttcttcggctatcgcaaaggcgccttcaccggcgccgatgccgaccgcgac
ggtttcttccagctggcgcaaggcggcaccttgttcctggatgaggtggccgagttgccg
ctggcgatgcaggtgaagctgctgcgcgcgatccaggagaaggcggtgcgcaagctgggc
gccagccaggaagaggcggcggatgttcgcatcatctgcgccactcaccgcgatctggcg
gcgcgggtggaggcggggcagttccgccaggacctgtactatcgcctcaatgtactgccg
ctgcgcatgccgccgctgagagaactgcgcgacgatatcccgctgtttgccgatcgcttg
ctgcagcgtttcggcggcgcgtccgcgccgcggctgactgccgacgcgcgccgcgcgctg
caggaccacgcctaccccggcaatttccgcgagctggaaaacatcctggagcgcgcggtg
gccttggccgcctcgccttcgctgtcccgcgacgatctgcagctgacgccctgcgtcgaa
tacagcccggaacccggtagcggcgaaccgctgcaggactaccttgaccgcgtcgagcgc
gaggccatcgtcaaggcgctggagggcacccgttacaatcgcacccaggccgcgaagaaa
ctgggcgtcacttttcgttccttgcgttaccggatggagcggctgggggtgaagtga
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