Chromobacterium phragmitis IIBBL 112-1: DK842_22440
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Entry
DK842_22440 CDS
T05549
Name
(GenBank) recombination protein RecR
KO
K06187
recombination protein RecR
Organism
chri
Chromobacterium phragmitis IIBBL 112-1
Pathway
chri03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
chri00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
DK842_22440
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
chri03400
]
DK842_22440
DNA repair and recombination proteins [BR:
chri03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
DK842_22440
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
DK842_22440
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Toprim_4
RecR_HhH
RecR_C
Toprim
RecR_ZnF
HHH
HHH_5
DZR
Motif
Other DBs
NCBI-ProteinID:
AXE32427
UniProt:
A0A344UES0
LinkDB
All DBs
Position
complement(4727780..4728376)
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AA seq
198 aa
AA seq
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MKNPPALEQLISALKVLPGVGPKTAQRMAFHLLQRDKKGADKLARALDVALTRLTHCQRC
NTFSESELCPICADESRRQDQLCIVEMPADLMMLEQAKCFEGLYFVLMGRISPLDNIGPK
DLNLDKLLTRALDGQVGEIVIATNFTAEGEVTAHMLSELFKGRGLAVTRIARGMPAGGEL
EYVDLGTLAQAVYERRGV
NT seq
597 nt
NT seq
+upstream
nt +downstream
nt
atgaagaaccctcccgcgctggagcaattgatctccgccttgaaagttttgcccggcgtg
ggcccgaaaaccgcccagcgcatggctttccacctgctgcagcgggacaagaagggcgcc
gacaagctggcgcgcgcgctggacgtggcgttgacccggctgacgcattgccagcgctgc
aatactttcagcgagtccgagctgtgcccgatctgcgctgacgagagccgccgccaggat
cagttgtgcatcgtcgagatgccggccgacctgatgatgctggagcaggccaaatgcttc
gagggcctgtatttcgtgctgatgggccggatctcgccattggacaatattggtcccaag
gacctgaacctggacaagctgctgacgcgcgcgctggacggacaggtgggcgagatcgtg
atcgccaccaacttcaccgccgaaggcgaagtcaccgcccatatgctgagcgagctgttc
aaggggcgcggcctggcggttacccgcatcgcccgcggcatgccggcgggcggcgagctg
gagtatgtcgacctgggcaccctggcgcaggcggtgtacgagcgcaggggcgtgtag
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