Chromobacterium sp. ATCC 53434: CXB49_16375
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Entry
CXB49_16375 CDS
T05234
Name
(GenBank) TIGR01621 family pseudouridine synthase
KO
K06177
tRNA pseudouridine32 synthase / 23S rRNA pseudouridine746 synthase [EC:
5.4.99.28
5.4.99.29
]
Organism
chro
Chromobacterium sp. ATCC 53434
Brite
KEGG Orthology (KO) [BR:
chro00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
chro03009
]
CXB49_16375
03016 Transfer RNA biogenesis [BR:
chro03016
]
CXB49_16375
Enzymes [BR:
chro01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.28 tRNA pseudouridine32 synthase
CXB49_16375
5.4.99.29 23S rRNA pseudouridine746 synthase
CXB49_16375
Ribosome biogenesis [BR:
chro03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
CXB49_16375
Transfer RNA biogenesis [BR:
chro03016
]
Prokaryotic type
tRNA modification factors
Psudouridine synthases
CXB49_16375
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_2
Motif
Other DBs
NCBI-ProteinID:
AUH52276
UniProt:
A0A2H5DZ01
LinkDB
All DBs
Position
complement(3722561..3723235)
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AA seq
224 aa
AA seq
DB search
MYTLIHSDPRFYLVDKHPGVGFHREGEEPGLMDALRASLGDEALWPVHRLDRITSGLILV
ARSAEAARLLGDALAAREVEKYYLALSDRKPLKKQGRVAGDMEKGRGGAWRLTAGRDHPA
VTQFFSYSLQPGLRLFLLRPRTGKTHQLRVAMKSQGAPILGDALYGGSAADRGYLHAYAL
RFELDGERFAFVRPPAAGERFAAEPCLARLAELAEPWAQPWPDA
NT seq
675 nt
NT seq
+upstream
nt +downstream
nt
atgtacacgctgatccacagcgatccccgtttctatctggtggacaagcatcccggcgtc
ggtttccaccgcgagggcgaggagccgggcctgatggacgcgctgcgcgccagcctcggc
gacgaggcgctgtggccggtgcaccggctggaccgcatcacgtccggcctgatcctggtg
gcgcgctcggccgaggcggcgcggctgctcggcgacgcgctggcggcgcgcgaagtggag
aaatattatctggcgctgtcggaccgcaagccgctgaaaaagcagggccgcgtcgccggc
gacatggaaaagggcaggggcggcgcctggcggctgacggcgggccgggaccatccggcc
gtcacgcagttcttcagctattcgctgcagccggggctcaggctgtttctgctgaggccg
cgcaccggcaagacccatcagttgcgggtggcgatgaagtcgcagggcgcgccgatactg
ggcgacgcgctatacggcggcagcgccgccgaccgcggctatctgcacgcctatgcgctg
cgtttcgagctggacggcgagcgtttcgccttcgtccgcccgcccgccgccggcgagcgc
ttcgcggcggagccgtgcctcgccaggctggcggagctggccgagccgtgggcgcagccg
tggccggacgcgtga
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