Cytophaga hutchinsonii: CHU_0924
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Entry
CHU_0924 CDS
T00385
Symbol
ddlA
Name
(GenBank) D-alanine--D-alanine ligase A
KO
K01921
D-alanine-D-alanine ligase [EC:
6.3.2.4
]
K01924
UDP-N-acetylmuramate--alanine ligase [EC:
6.3.2.8
]
Organism
chu
Cytophaga hutchinsonii
Pathway
chu00470
D-Amino acid metabolism
chu00550
Peptidoglycan biosynthesis
chu01100
Metabolic pathways
chu01502
Vancomycin resistance
Brite
KEGG Orthology (KO) [BR:
chu00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
CHU_0924 (ddlA)
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
CHU_0924 (ddlA)
09160 Human Diseases
09175 Drug resistance: antimicrobial
01502 Vancomycin resistance
CHU_0924 (ddlA)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
chu01011
]
CHU_0924 (ddlA)
Enzymes [BR:
chu01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.4 D-alanine---D-alanine ligase
CHU_0924 (ddlA)
6.3.2.8 UDP-N-acetylmuramate---L-alanine ligase
CHU_0924 (ddlA)
Peptidoglycan biosynthesis and degradation proteins [BR:
chu01011
]
Precursor biosynthesis
Amino acid ligase
CHU_0924 (ddlA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Dala_Dala_lig_C
Dala_Dala_lig_N
ATP-grasp_4
ATP-grasp_3
RimK
ATP-grasp
ATPgrasp_ST
GARS_A
Hepar_II_III_N
Motif
Other DBs
NCBI-ProteinID:
ABG58203
UniProt:
A0A6N4SPG5
LinkDB
All DBs
Position
complement(1057615..1060308)
Genome browser
AA seq
897 aa
AA seq
DB search
MRIGIIFGGQSREREISFAGGRTVYDNLNKDIFTTVPIFVDSLGQFILLDWQYIYKGTIR
DFYPPFEFLPKSIHGFQVYVESLGDLPKEERDAMIQKVGRKIEPSDLKELIDFAFLALHG
PYGEDGAIQGMLDWNNIPYSGSGILPSAIGINKYIQKKLVAQASFNGPNYVTYKKSTWLK
GADTKALLAHFESSVGFPFVVKAPSQGSSIGITVISERNEEKLKQALNRSFFLQEITAAD
WNTKTEHAKIKWVATLTDIRDGIGMPVNDVLQGKTIYHPEELLAHLNQSLSSKERVLLES
LDNEEEIIIESFIKGQEFSCIVIQDEDGNPIALPPTGIVKGNDFFDYRSKYLPGMSRKIT
PIDIPGEQVELIRSECCRLYSTLQFNVYARIDGFISPEGEVFLNDPNTTSGMMPSSFFFH
QAAEIGLNPSQFLTYIIRTSIQERIKDGKRSLRYKQLLATLDQAISSEKNSSKEKIKIAV
VMGGYSSERHISVESGRNIFEKLSSSTKYQPLPVFLTGSDEQHRLFILPINILLKDNADD
IREKVINFKGHHPIIEHIAKETESISSRYVSNAIKDPKEISYKELSELVDGVFIALHGRP
GEDGSMQKELEKYQLPYNGSGIQSSQITINKFETNRILREHGISVANHRMVYKQEWLDAG
EKLLSEIESGFIYPIIAKPSDDGCSSAVKKIKNRDELRAYTRLMFGEEAIQGSVSSSVLG
LKYNEEFPQKDYFLIEDLVSKGNAKHFLEVTGGLMTRFNDKGNVEYEIFEPSESLATGDV
LSLEEKFLAGEGQNITPARYTTNKADYEQVASEVRATLKRVAEVLNIQGYARIDAFVRVF
ENNRSETIIIEVNSLPGMTPATCIFHQTAINGYKPYDFIDNILTFGIEREKKKLAKI
NT seq
2694 nt
NT seq
+upstream
nt +downstream
nt
atgagaataggaatcatctttggtggacagtctagagaacgagaaatttcatttgctgga
ggaagaactgtttacgataatttaaataaagatattttcactaccgttcccatctttgtt
gatagccttggccagttcattttattagactggcaatatatctacaagggaaccattcgt
gatttctaccctccttttgaatttcttcctaaaagcattcatggctttcaggtctatgtt
gaatcacttggtgaccttccaaaagaagaacgggatgccatgattcaaaaagtaggcaga
aaaattgagccttctgacctgaaagaattaattgactttgccttccttgctttacatggt
ccttatggagaagatggtgccatacaaggtatgctggactggaataatattccctattca
ggttcaggcattctgccttcagctattggtatcaataaatacattcagaagaaattagta
gcacaagccagtttcaacggacctaactatgttacctacaaaaaatctacctggctaaaa
ggtgctgatacaaaagcactgcttgcacattttgaatcaagcgtaggttttccttttgtt
gtaaaagcaccgtcacaaggctcttccattggtattacggttatcagtgagcgaaatgaa
gaaaaattaaagcaagcgctaaaccgtagcttttttcttcaggaaattacagctgcagac
tggaacacaaaaacagaacatgcgaaaataaaatgggtggcaacccttaccgatatccgc
gatggtattggcatgcccgtaaatgatgtattacaaggcaaaaccatttatcatccggaa
gaattattagcacatttaaatcaatcgctttcttctaaagaacgtgttttattggaaagt
ttagataatgaggaagaaatcatcattgaatcctttattaaaggccaggaattctcctgc
attgttatacaggatgaagatggtaatccaatagcgctgcctcctacgggtattgttaaa
ggaaatgatttctttgattaccgttcaaaatatctgccgggcatgtcaagaaagatcaca
cctattgatattcctggcgaacaagttgaattgatccgcagcgaatgctgccgcttatat
tcaaccttacagttcaatgtatatgcacgtattgatggttttatttctcctgaaggagag
gtcttcttaaacgacccgaatacgacttctggtatgatgccatcgtccttcttttttcat
caggcagcagagatcggcttaaatccgtctcaattccttacctacattatccgtacgtct
attcaggagcgtattaaagacggcaaaagaagtttgcgctacaaacaattgctggcaaca
ctggatcaggcaatttcatctgaaaagaattcttccaaagaaaaaattaaaattgctgtg
gtaatgggtggctattcttctgaacgccacatctccgttgaaagcggaagaaatatcttt
gaaaaactttcctccagtacaaaataccagccgcttcctgtgttcttaacaggcagtgac
gagcagcaccgtttattcatcttaccgatcaatattttattgaaagacaatgcagatgat
atacgtgaaaaagtaatcaactttaaagggcaccacccgatcattgaacatattgcaaaa
gaaacggaatcgatcagcagccggtatgtgagcaatgcaattaaagatccgaaagagatt
tcctacaaagaactttctgagctggtagatggcgtcttcattgccctgcacggccggccg
ggagaagatggcagcatgcagaaagagcttgagaaatatcagttgccgtataacggttca
ggtatacaaagttctcagatcacgatcaataaatttgagacaaaccgcattcttcgggag
catggtatttctgttgcaaaccacagaatggtttacaagcaggaatggttagacgcaggc
gaaaaattgttatccgaaattgaatccggttttatatatcccatcattgctaaaccatct
gacgatggatgcagctctgcggttaaaaagataaaaaacagagacgagcttcgtgcctat
acccgattaatgtttggtgaagaagccattcagggatctgtcagttcttccgtattggga
ttgaaatataacgaagaatttccgcagaaagattatttcttaattgaagatctggtttct
aaaggcaatgcaaaacatttcctggaagttacgggcggattaatgacccgtttcaacgat
aaaggcaacgttgaatatgaaatatttgaaccttctgaatcgttggctaccggtgatgtt
ttatccctggaagaaaaattccttgccggtgaaggacagaacataaccccggcgcgttat
acaaccaacaaagcagattatgagcaagtggcttcagaagtacgtgcaacattaaaacgc
gtagctgaagtattgaatattcaggggtatgcacggatcgatgcgtttgtacgtgtcttt
gaaaacaatagatctgaaaccattatcattgaagtaaactcgctgccgggcatgacgcct
gcaacctgtatatttcaccagacggctattaatggatataagccatacgacttcattgat
aacattttaacatttggcatagaaagagaaaagaaaaaattagctaaaatataa
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