Capra hircus (goat): 102169403
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Entry
102169403 CDS
T02910
Symbol
AGRN
Name
(RefSeq) agrin isoform X1
KO
K06254
agrin
Organism
chx
Capra hircus (goat)
Pathway
chx04512
ECM-receptor interaction
chx04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
chx00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
102169403 (AGRN)
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
102169403 (AGRN)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
chx00535
]
102169403 (AGRN)
Proteoglycans [BR:
chx00535
]
Extracellular matrix (ECM) proteoglycans
Basement membrane proteoglycans
102169403 (AGRN)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Laminin_G_1
Kazal_2
Laminin_G_2
Kazal_1
NtA
Laminin_EGF
CFAI_KAZAL
SEA
EGF
hEGF
Motif
Other DBs
NCBI-GeneID:
102169403
NCBI-ProteinID:
XP_017916049
EnsemblRapid:
ENSCHIG00000006763
LinkDB
All DBs
Position
16:complement(49921747..49960860)
Genome browser
AA seq
2045 aa
AA seq
DB search
MASLRPFSRALLQPLLLLLVVAVRALPSADGTCPERALERREEEANVVLTGTVEEILNVD
PVQHTYSCKVRVWRYLKGKDVVAQESLLDGGNKVVIGGFGDPLICDNQVSTGDTRIFFVN
PAPPYLWPAHKNELMLNSSLMRITLRNLEEVEHCVEDKPGTHFTPVPPTPPDACRGMLCG
FGAVCEPSADEPGRASCVCKKSACPSVVAPVCGSDASTYSNECELQRAQCSQQRRIRLLR
RGPCGTRDPCSNVTCSFGSTCVPSADGLTAMCLCPATCLGAPERPVCGSDGSDYPSECQL
LRQACAHQENVFKKFDGPCDPCQGSLSDLSRTCRVNPRTRQPEMLLRPESCPPRGTPVCG
DDGVTYDNDCVMGRTGAARGLLLQKVRSGQCQPQDQCPEPCRFNAVCLSRRGRPRCSCDR
VVCDGAYRPVCAHDGHTYDNDCWRQQAECQQQRSIPMKHQGPCDQPPSPCRGVQCPFGAT
CTVKNGEAECACHQACSGVYDPVCGSDGVTYGSVCELEASACALGREIRVARRGPCDRCG
QCRFGALCEAETGRCVCPSECVASAQPVCGSDGRTYASECELHVHACTRQISLHVASAGP
CQTCGDTVCAFGAVCSAGQCVCPRCERPPPGPVCGSDGVTYGSSCELREAACQQQTQIEE
ARVGPCEQAECGSGGSGSGEDGECEPELCRQRGGIWDEDSEDGPCVCGFSCQGVLRSPVC
GSDGVTYRTECELKKARCESQPELYVVAQGACRGPTLAPLPPAIPLHCAQTPYGCCQDNI
TVAQGVGLAGCPSSCQCNPHGSYGGTCDPVTGQCSCLPGVGGLKCDRCEPGFWNFRGIVT
DGRSGCTPCSCDPRGAVRDDCEQMTGLCSCKPGVAGPKCGQCPDGRALGPAGCETDSSPP
TTCAEMLCEFGASCVEEAGSAHCVCPTPTCLAADATKVCGSDGVTYGNECQLRTIACRQG
LEISIQSFGPCQEGITSGPHQTSASVAPLALDHKAPLPPPSALPLAPSSTRHSQPTARAS
SQPWTMASIPRTTARPVLTMPPMAPSPAASLVTSAFGESGSADGSGDEELSGDLEASGTG
SGGLESPERDSAGTPGLPMERASCYNSPMGCCSDGKTPSLDAEGSNCPATKAFQGVLELE
GVEGQELFYTPEMADPKSELFGETARSIESALDDLFRNSDVKKDFRSVRLRDLGPGSSVR
AIVEVHFDPTTAFRASDVGRALLRQLQVSRRRSLGVKRPLQEHVRFMDFDWFPAFFTGAT
PAAATARATTVARLPPSAATPRAHFPSHTSRPVSRTTPPPTTRQPPTTAPSRVPGRRPLP
PGTQQPRRPCDSQPCLHGGTCQDQGSGADFTCSCPAGTEGAVCEKALHPSVPAFGGSSFL
AFPTLRAYHTLRLALEFRALEPQGLLLYNGNARGKDFLGLALLGGRVQFRFDTGSGPAVL
TSSVPMQPGQWHRLELSRHWRQGTLSVDGETPVLGQSPSGTDGLNLDTDLFVGGVPEDQA
STVLERTSVSVGLRGCIRLLDVNNQRLELSSWPESATRSSGVGECGDHPCLPSPCLGGAP
CQALEAGRFRCQCPPGRFGPTCADEDPCQPNPCHGAAPCRVLPQGEAKCECPHGREGSLC
QTVSEPEDNQPFLADFSSFSYLELKGLHTFERDLGEKMALEVVFLARSPSGLLLYNGQKT
DGKGDFVSLALHNGLLEFRYDLGKGAAVIRSKEPVALGAWTRVSLERNGRKGAMRVGDGP
RVLGESPKSRKVPHTVLNLKEPLFVGGAPDFSKLARAAAVSSGFDGAIQLVSLNGRQLLT
REHVVRAMDVSSFADHPCTQAEGQPCLHGASCLPREASYECLCPAGFSGLHCEKGLIEKS
AGDLDALAFDGRTYIEYLNAVTESEKALQSNHFELSLRTEATQGLVLWSGKATERADYIA
LAIVDGRLQLAYDLGSQPVVLRSTVPVNTNRWLRVRAHRKQREGSLQVGNEAPVTGSSPL
GATQLDTDGALWLGGLGKLPTGQALPKAYGTGFVGCLRDVVVGQRPLHLLEDAITKPELR
PCPAL
NT seq
6138 nt
NT seq
+upstream
nt +downstream
nt
atggccagcctgcggccgttcagccgggccctgctgcagcctttgctgctgctcctggtg
gtggccgtgcgcgccctgcccagcgcggacgggacgtgccccgaacgcgcgctggagcgg
cgcgaggaggaggcgaacgtggtgctcaccggcaccgtggaggagatcctcaacgtggac
ccggtgcagcacacatactcgtgcaaggttcgggtctggcggtacctgaagggcaaagat
gtggtggcccaggaaagcctgctggacggaggcaacaaagtggtgattggcggcttcgga
gaccccctcatctgtgacaaccaggtgtccactggagacaccaggatcttctttgtgaac
cctgccccaccatacctgtggccggcccacaagaatgagctgatgctaaactccagcctc
atgcgcatcaccctgcggaacctggaggaggtcgagcactgtgtggaagacaaacctggg
acccacttcacaccagtgcccccaacacctccagatgcgtgccgaggaatgctgtgtggc
tttggcgctgtctgcgagcccagcgcagacgagccgggccgagcctcctgcgtgtgcaag
aagagcgcctgccccagcgtggtggcgcctgtgtgcggctcggatgcctccacctacagc
aacgagtgcgagctgcagcgggcgcagtgcagccagcagaggcgcatccgcctgctgcgc
cgcgggccctgcgggacccgggacccctgctccaatgtcacctgcagctttggcagcacc
tgtgtgccctctgctgatggactgacggctatgtgcttgtgccctgccacgtgcctgggg
gccccggaacgccctgtgtgcggcagcgacggcagcgactaccccagtgagtgccagctc
ttgcgccaagcctgtgcccaccaagagaacgtcttcaagaagttcgacggtccttgcgac
ccctgccagggctccctcagtgacctgagccgtacctgccgtgtgaacccacgcacgcgg
cagccagagatgctcctgcgaccagagagctgccctccccgtgggacacccgtgtgtggg
gacgacggggttacttacgataatgactgcgtcatgggccgaacaggggctgcccgaggc
ctcctcctgcagaaagtgcgctctggccagtgccagcctcaagaccagtgcccggagccg
tgcagattcaatgccgtctgcctgtcccgccgaggccgcccccgctgttcctgtgaccgc
gtcgtctgtgacggggcctacagacctgtgtgtgcccatgacgggcacacgtatgacaat
gactgctggcgccagcaggccgagtgtcagcagcaacgtagcatccccatgaagcaccag
ggcccgtgtgaccagcccccatccccatgccgtggggtgcagtgtccatttggggcaacg
tgtactgtgaagaatggggaagccgagtgtgcatgtcaccaagcgtgttcaggcgtctat
gaccctgtgtgtggcagtgatggcgtcacgtatggcagtgtgtgcgaactggaagcttca
gcctgtgcccttgggcgggagatccgagtggctcgccgaggaccctgtgaccgctgtggg
cagtgccgctttggagccctgtgtgaagctgagactgggcgctgtgtgtgcccctccgaa
tgtgtggcctcagcccagcctgtgtgtggctctgatgggcgcacatatgccagtgaatgt
gaactacacgtgcacgcctgcacacgtcagatcagtctgcacgtggcctcagccggtccc
tgccagacctgtggagacacagtgtgtgcctttggggctgtgtgctcagcggggcagtgc
gtgtgtccccggtgtgagcgccctccacccggccccgtgtgtggcagtgatggcgtgacc
tacggcagttcatgtgagctccgtgaggctgcctgtcagcagcagacacagatcgaggaa
gcccgagtggggccgtgtgagcaagctgagtgtggctccggaggctcgggttcgggagag
gacggcgagtgtgagcctgaactgtgccggcagcgaggtggcatctgggatgaggactcg
gaggatgggccatgcgtctgcggcttcagctgccagggcgtcctgaggagcccggtgtgt
gggtcggatggagtcacctaccgcaccgaatgtgagctgaagaaggccaggtgtgaatca
cagccagagctgtatgtcgtggcccagggagcctgccgtggccccactttggccccattg
ccacctgcgattcccctgcactgtgctcagaccccctacggttgctgccaggacaacatc
actgttgcccagggcgtgggcctggctggctgccccagctcatgccagtgtaacccacac
ggctcctacggtggcacctgtgacccagtcacaggccagtgctcctgcctcccgggtgtg
gggggcctcaagtgtgaccgctgtgagcctggcttctggaacttccgtggtatcgtcact
gatggccggagcggctgtaccccctgcagctgtgacccccggggtgccgtgcgggacgac
tgtgagcagatgactgggctatgctcctgtaagcctggggtggccgggcccaagtgtggg
cagtgtccagatggccgtgctctgggccctgctggctgtgaaacagactcttcgccaccc
acgacctgtgctgagatgctttgtgagtttggggcatcctgtgtggaggaggctggctct
gcccactgcgtgtgcccaacacccacctgtctagcggctgatgctaccaaggtctgtggg
tcagatggagtcacttatggcaatgagtgccagctgaggaccatcgcctgccgccagggc
ttggagatctctatccagagcttcggcccctgccaggaaggcatcacttctggtccgcat
cagacatccgcatctgtggcccccttagcacttgatcacaaggcaccattgccgcccccc
agcgccttgcccctggctcccagcagtacccgccacagccagcccactgctcgagcctca
tcacaaccttggaccatggccagcatccccaggaccaccgcaaggccagtgctgaccatg
cctcccatggccccctccccggcagccagcctcgtcacctctgccttcggcgaatctggc
agcgctgatgggagcggtgacgaggagctgagcggtgacttggaggccagtgggactggc
tcaggaggacttgagtccccggaaagagacagtgctgggacccctgggctacccatggaa
agggcttcttgctacaactcacctatgggctgctgctcagatggcaagacaccctccctg
gacgcagagggctctaactgtcctgccaccaaggcgttccagggtgtgctggagctcgaa
ggggtcgaggggcaagaactgttctacacgccggagatggcggaccccaagtctgagctg
tttggggagactgccaggagcattgagagcgcactggatgacctcttccggaattcagac
gttaagaaggacttccgaagtgtccgcctacgggacttggggccaggcagctcggtccgg
gccattgtggaagtgcactttgaccccaccacagccttcagagcgtccgacgtgggccgg
gccctgctccggcagctccaggtgtccaggcgcagatccctgggcgtgaagcggcctctg
caggaacacgtgcggttcatggacttcgactggtttcctgcattcttcacgggagccacc
ccagctgcagccacagccagagccaccacagtggcccgcctgccaccttcagctgcaacc
cctcgggcccactttcccagtcacacaagccggcctgtcagcaggaccacacctcccccg
accacgcgccagccccccaccactgcccctagtcgtgtgcctggacgccgtcccctgccc
ccaggcacccagcagccccgaaggccctgtgactcccagccctgcctccatgggggcacc
tgccaggaccagggctcaggtgcagacttcacctgcagctgcccagcaggcacggagggt
gccgtctgtgagaaggccctgcacccctccgtgccagccttcgggggctcctccttcctg
gcctttcccacccttcgtgcctaccacaccctgcgcctggcgctcgagttccgggcgctg
gagccccaggggctgctgctctacaacggcaatgcccggggcaaggacttcctgggactg
gcgctgctgggaggccgtgtgcagttcaggttcgacacaggctcagggcccgcggtgctg
acgagctccgtgcccatgcagcccggccagtggcatcgcctggagctgtctcggcactgg
cgccaaggtactctctccgtggatggtgagactcctgttctgggccagagccccagtggc
actgatggtctcaacctggacactgaccttttcgtgggtggcgtccctgaggatcaggct
tccacggtgctagagcggacctctgtcagcgttggtcttaggggttgtatccgcttgctg
gacgtcaacaatcagcggctggagctgagcagctggccagaatctgcgactcgaagctcc
ggagtgggcgagtgtggggaccacccctgtctgcctagcccctgcctcggaggggccccg
tgccaggccctggaggcaggcaggttccgctgtcagtgcccacccggccgctttggccca
acttgtgctgacgaggacccttgtcagccgaacccctgccatggagcagccccctgccgc
gtgctgccccagggagaggccaagtgcgagtgcccccatggccgggagggcagcctctgc
cagacagtctcagagccggaggacaaccagccgttcctggctgatttcagcagcttctcc
tacctggaactgaaaggcctgcacacctttgagcgggacctgggggagaagatggcgctg
gaggtggtattcctggctcggagccccagcggcctgcttctctataatggacagaagaca
gatggcaagggtgactttgtgtctctggcgttgcacaatggcctcctggagttccgctac
gacctgggcaagggggcagcggtcatcaggagcaaggagccggtggccctgggtgcttgg
accagggtctccctggagcgaaatggacgcaaaggagccatgcgggttggcgatgggcct
cgcgtgctgggggagtccccgaaatcccgcaaggtgccacacaccgttctcaacctaaag
gagccactctttgttgggggggcccctgatttcagcaagctggcccgagcagctgccgtg
tcctctggctttgatggagccatccagctggtctccctgaatggccgccaactgctgacc
cgtgagcacgtggtccgggccatggacgtctcgtcctttgcagaccacccttgtacccag
gccgagggtcagccttgcctccatggggcttcctgtctcccccgtgaggcctcctacgag
tgcctgtgtcctgcaggcttctcggggctgcactgtgagaagggcttgattgagaaatca
gctggggacctggacgcactggcttttgatggacggacctacatcgagtacctcaacgct
gtgaccgagagtgagaaggcactccagagcaaccactttgagctgagcctgcgcactgag
gccacacaggggctggtgctgtggagtggcaaggccacggagcgggctgactacatcgca
ctggccatcgtggacgggcgcctgcagctggcttacgacctgggctcccagcccgtggtg
ctgcgctccaccgtaccagtcaataccaaccgctggttgcgggtcagggcacacaggaaa
cagagggaaggttcccttcaggtgggcaacgaggcccctgtgactggctcctccccactg
ggtgccacgcagctggacacagatggagccctgtggctgggtggcctggggaagctgccc
acgggccaggccctgcccaaagcctatggcacaggctttgtgggctgcctgcgggacgtg
gtggtgggccagcgcccgctgcacctgctggaggacgccatcaccaagccagagcttcgg
ccctgccctgccctgtga
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