Capra hircus (goat): 102170065
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Entry
102170065 CDS
T02910
Symbol
TRPA1
Name
(RefSeq) LOW QUALITY PROTEIN: transient receptor potential cation channel subfamily A member 1
KO
K04984
transient receptor potential cation channel subfamily A member 1
Organism
chx
Capra hircus (goat)
Pathway
chx04750
Inflammatory mediator regulation of TRP channels
Brite
KEGG Orthology (KO) [BR:
chx00001
]
09150 Organismal Systems
09157 Sensory system
04750 Inflammatory mediator regulation of TRP channels
102170065 (TRPA1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
chx04040
]
102170065 (TRPA1)
Ion channels [BR:
chx04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
102170065 (TRPA1)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Ank_2
Ank
Ank_4
Ank_3
Ank_5
Ion_trans
PKD_channel
Motif
Other DBs
NCBI-GeneID:
102170065
NCBI-ProteinID:
XP_017913911
EnsemblRapid:
ENSCHIG00000012691
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All DBs
Position
14:46458959..46518350
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AA seq
1118 aa
AA seq
DB search
MRRSLRKMLRPGEKEPRDFVCLGVEDHKDNSNDFKVVFEGNKCGLQNFVKKHKRLKKYDD
VNASPLHHAAEEGQVELMEMIVNESSCEVLNVMDDYGNTPLHWAAGKNQVESVKFLLLKG
ANPNLRNCSMMAPLHVAVQGGYNDVMKVLIEHSSTDVNLEGENGNTALIITCFTDNSEAM
QLLLNKGAKPCKSNKWGCFPIHQAAFSGAKKCMEIILKFGEEHGYSRLSHINFVNSGKAS
PLHMAVQSGDLDMIKMCLDNGAQLDLLEKGKCTALHFAATQGATEIVKLMVSSYSGSSDI
VNEVDGNHETLLHRASLFDHHELADYLISVGADIDITDSEGRSPLLLATASASWNTVNLL
LSKGARVDIKDNLGRNFLHLTVQQPYGLKNLHPEFLQMQHIKELVMDEDNDGCTPLHYAC
RQGVPVSVNNLLNFNVSIHSKSKDKKSPLHFAASYGRINTCQRLLQDISDTRLLNEGDLH
GMTPLHLAAKNGHDKVVQLLLKKGALFLSDHSGWTALHHASLGGYTQTMKVILDTNLKCT
DRLDEEGNTALHFAAREGHAKAVSLLLSYDADVVLNKQQASFLHVAIHNKRKEVVLTTIR
NKRWGECFKVFNHCSPTNRCPVIELVEYLPECMKVLLDFCVMPSTEDKSXQDYHIEYNFT
YLQCPLEFTKKGTPVQDVVYEPLLTLNAMVQHNRIELLNHPVCKEYLLMKWLAYGFRAHV
LNLGSYCLGLFPMTFLVVSIRPGMAFNSTGIINETSAHSEILDTKNSYAINFCMILVLLS
SILGYCKEVAQIFQQKRNYFLDKDNAAEWIIYTTSIIFVSPLFIRIPAYVQWQCGAVAIF
LYWMNFLLYLQRFEKCGIFIVMLEVIMKTLLKSTIVFVFLLVAFGLCFYVLLNFQDAFSS
PFLSIMQTFSMMLGDINYHDAFLEPYLKDELEYPLLSFVHLITFTMFVPIVLMNLLIGLA
VGDIAEVQKHALLKRIAMQVELHTSLEKKLPLWFLHKVDQKSIIVYPNRPRYSRGILRGV
FHYIFCPHETRQEIPNVDTSLETEIMKQKYRLKDLGSLLEKQHELIKLIIQKMEIISETE
DEDYHSSFQDRFKKQQLEQRNSKWNCVLRAVKAKTHSP
NT seq
3357 nt
NT seq
+upstream
nt +downstream
nt
atgaggcgaagcctgaggaagatgctgcgccccggggagaaggagccccgggacttcgtc
tgcctgggcgtggaggaccacaaggacaacagcaatgacttcaaggtggtgttcgaggga
aacaaatgcggtttacaaaactttgtgaagaaacacaagagattaaaaaaatatgatgat
gtgaatgcctcccctttgcaccatgctgcagaagaaggtcaagtggagctgatggagatg
attgtcaatgagtcctcctgtgaagtactgaatgtgatggatgattatggaaataccccg
ctgcactgggccgcaggaaaaaaccaggtggaaagtgttaagtttcttcttctcaaagga
gccaacccaaacctccgaaactgcagcatgatggccccgctgcatgtggctgtgcagggc
gggtacaacgacgtgatgaaggtcttgattgagcacagcagtaccgatgttaatctggaa
ggagaaaatggaaacacagctctgataatcacatgtttcacagataacagtgaagccatg
cagcttttgttaaataaaggagctaagccatgtaaatcaaataaatgggggtgcttccct
attcaccaggcagcattttcgggtgccaaaaaatgcatggaaataatattaaagtttggt
gaggaacatgggtatagcagactgtctcacattaactttgtgaacagtgggaaagccagc
cctctccacatggcagttcaaagtggggacttggacatgattaaaatgtgcctggacaat
ggtgcacagctggacctgctagagaaagggaagtgcacagcccttcattttgctgccacc
cagggagccactgagatcgttaagctgatggtatcttcctattctggcagcagcgatatt
gttaatgaggtggatggaaatcacgagacactgcttcacagagcctcattatttgatcac
catgaactcgctgactacttaatttcagtgggagcagatattgatatcaccgattctgaa
ggacggtctccacttctattggcaactgcttctgcatcctggaatactgtaaatttgctc
ctctctaaaggtgcccgtgtggacataaaagataatcttggacgtaattttttgcatttg
actgttcaacagccttatggattaaaaaatttgcatcctgagtttctgcagatgcaacat
ataaaagagctggtgatggacgaggacaatgatgggtgcacccctctgcactatgcgtgt
cgacagggggtccctgtctctgtaaacaacctacttaactttaatgtgtccattcattcc
aaaagcaaagataagaaatcacccctgcattttgcagccagttatgggcgtatcaatacc
tgtcagaggctcctgcaagacataagtgacacgaggcttttgaatgaaggtgacctgcat
ggaatgactcctctccacctggctgcaaagaacgggcatgataaagttgttcagctgctt
ctgaaaaagggtgcattatttctcagtgaccacagtggctggactgctttgcatcatgct
tccttgggcgggtatactcagaccatgaaggtcattctcgacactaacttgaaatgcaca
gatcggctagatgaagaagggaacaccgcgcttcacttcgcggcgagggagggccatgcc
aaagccgtctccctgctcctgagctacgatgccgatgtggtcctgaacaagcagcaggcc
tccttcctgcacgttgcaattcacaataagagaaaggaggtggtcctcacgaccatcagg
aacaaaagatggggagagtgtttcaaggtttttaatcattgttctcctacgaatagatgt
ccagtcatagaactggtagaatacctccctgaatgcatgaaagtacttttggatttttgc
gtcatgccctccacagaagacaagtccntccaagactaccatatcgagtataatttcaca
tatcttcagtgtccattagaattcaccaaaaaaggaacacctgtacaggacgttgtatat
gagcctcttttaactctcaatgcaatggtgcaacataaccgcatagagcttctcaaccac
cctgtgtgtaaagaatacttacttatgaaatggttggcttatgggtttagagcccatgtt
ttgaacctaggatcttactgtcttggtctgtttcccatgacctttcttgttgtcagtatc
agaccaggtatggctttcaactcaactggaatcatcaatgaaactagtgcccattcagaa
attttagacaccaagaattcctacgctataaatttctgtatgattttagttttgctctca
agtatattaggatactgcaaagaagtggcccaaattttccaacagaaaaggaattacttt
ttggataaggacaatgcagctgaatggatcatctacacaaccagcatcatatttgtgtcg
cccttgttcatcaggataccagcatatgtgcagtggcagtgtggagcggttgctattttc
ctctactggatgaacttcttattgtatcttcagagatttgaaaagtgtggaatttttatc
gtgatgttggaggtgattatgaaaactctgttgaaatcgacaattgtgtttgtcttcctt
cttgtggcttttggactctgcttttacgtgctcctgaatttccaggatgctttcagctct
ccgttcctttctataatgcagaccttcagcatgatgctaggagacatcaattatcacgat
gccttcctagagccatatttgaaggatgaattggagtatccacttctgtcctttgtacac
cttatcacattcaccatgttcgtcccaattgtcctcatgaatttacttattggtttggca
gttggtgacattgctgaggtccagaaacatgcactgttgaagagaattgccatgcaggtg
gaacttcacaccagcttggagaagaagctgccgctctggttcctacacaaagttgatcag
aaatccatcatcgtgtatcccaacagacccagatacagcagagggatattacgtggtgtg
tttcattatatcttttgcccccatgaaacgagacaagaaataccaaatgttgatacatct
ttagaaacagaaataatgaagcaaaagtaccggctgaaggatctcggttctcttctggaa
aaacagcacgagcttattaaactcatcattcagaagatggaaatcatctctgagacagag
gatgaagattaccacagttcttttcaagacaggtttaagaaacagcagttagaacaaagg
aatagcaaatggaattgtgttttgagggcagtaaaggcaaaaacacacagcccttaa
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