Capra hircus (goat): 102172867
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Entry
102172867 CDS
T02910
Symbol
NR1D2
Name
(RefSeq) nuclear receptor subfamily 1 group D member 2
KO
K08531
nuclear receptor subfamily 1 group D member 2
Organism
chx
Capra hircus (goat)
Pathway
chx04710
Circadian rhythm
Brite
KEGG Orthology (KO) [BR:
chx00001
]
09150 Organismal Systems
09159 Environmental adaptation
04710 Circadian rhythm
102172867 (NR1D2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
chx03000
]
102172867 (NR1D2)
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
chx03310
]
102172867 (NR1D2)
Transcription factors [BR:
chx03000
]
Eukaryotic type
Zinc finger
Cys4 thyroid hormone receptor-like
102172867 (NR1D2)
Nuclear receptors [BR:
chx03310
]
1. Thyroid hormone like
1D. Rev-Erb
102172867 (NR1D2)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C4
Hormone_recep
LpxD
Motif
Other DBs
NCBI-GeneID:
102172867
NCBI-ProteinID:
XP_017897488
EnsemblRapid:
ENSCHIG00000013761
UniProt:
A0A452EI43
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Position
27:3646595..3675846
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AA seq
578 aa
AA seq
DB search
MEVNAGGVIAYISSSSSASSPASCHSEGSESSFQSASSSVPSSPNSTHSDSNGNPKNGDL
SSIEGILKNDRIDCSMKTSKSSAPGVTKSHSGVTKFSGMVLLCKVCGDVASGFHYGVHAC
EGCKGFFRRSIQQNIQYKKCLKNENCSIMRMNRNRCQQCRFKKCLSVGMSRDAVRFGRIP
KREKQRMLIEMQSAMRTMMDSQLSGRLHSDPLADRHEQIALPAQEQPRPKPQLEPDHSKS
SSPSSSDFAKEEVIGMVTRAHKDTFMYNQEPRESSAETAVPPRERLAKNLEQYSVNHEPC
VGGPHGRFPCAESAQHLGGHYKGRSGVHYPGGHGVCVAGGHCVSFSGAYTQRVCDRVSID
GFSQNENKNGFLCNTGARMHLVCPMSKSPYVDPHKSGHEIWEEFSMSFTPAVKEVVEFAK
RIPGFRDLSQHDQVNLLKAGTFEVLMVRFASLFDAKERTVTFLSGKKYSVDDLHSMGAGD
LLNSMFEFSEKLNALQLSDEEMSLFTAVVLVSADRSGIENVNSVEALQETLIRALRTLIM
KNHPNEASIFTKLLLKLPDLRSLNNMHSEELLAFKVHP
NT seq
1737 nt
NT seq
+upstream
nt +downstream
nt
atggaggtgaatgcgggaggagtgattgcctacatcagctcgtccagctcagcgtccagc
ccagcctcttgccacagcgagggctctgagagtagcttccagtccgcgtcctcttctgtc
ccgtcttctccaaacagcactcattctgatagcaatgggaaccccaaaaacggcgatctg
tccagcattgaaggcatcctgaagaatgatcgaatagattgttctatgaaaaccagcaaa
tcgagcgcccctggggtgacaaagagtcacagtggagtgacaaaattcagtggcatggtt
ctgctgtgtaaagtctgtggggacgtggcctcaggattccactacggcgttcatgcttgt
gaaggctgtaagggttttttccggagaagcattcagcaaaacattcagtacaagaagtgc
ctgaagaatgaaaactgctctataatgaggatgaataggaacagatgccagcagtgtcgc
ttcaaaaagtgtctgtctgttggaatgtcgagagatgccgtgcggtttgggcgcattcct
aagcgtgagaaacagcggatgctgatcgagatgcagagtgccatgaggaccatgatggac
agccagctcagcggccgattgcacagcgaccctttagcagaccgtcatgagcagatcgcc
ttgccagcccaggaacaaccgcgacccaagccccagctggagccagaccacagcaaaagc
tcttctccctcctcctccgatttcgcgaaggaggaagtgatcggcatggtaaccagagcg
cacaaggacaccttcatgtataatcaggagccgcgcgaaagctcagcggagaccgcggtg
ccgccgcgagagcggctcgctaagaacctggagcagtacagcgtgaaccacgagccctgt
gtgggcgggccgcacggccgcttcccctgtgccgagagcgcgcagcatctcggcggacac
tacaagggccggagcggcgtgcactaccctggcgggcacggcgtctgtgtcgccggcgga
cactgcgtgagcttctccggtgcctatactcaacgagtgtgtgatagagtttccatagat
gggttttctcagaatgagaacaagaacggtttcctgtgcaacactggagcgagaatgcac
ctggtttgtccgatgagtaagtctccgtacgtagatcctcataaatcagggcatgaaatc
tgggaagaattttccatgagcttcaccccagcagtaaaggaggtggtggagtttgcaaag
cgcatccctgggttcagagacctctcgcagcacgaccaggtcaaccttttaaaggctggg
acttttgaggttttaatggtacggtttgcatcactgtttgatgcaaaggaacgcactgtc
acctttttaagtggaaagaagtatagtgtggatgacttgcactcaatgggagcaggggat
ctgctaaactctatgtttgagtttagtgagaagctaaatgccctccaacttagtgatgaa
gagatgagtctgtttacagcagttgtcctggtctctgcagatcgatcggggatagaaaac
gtcaactccgtggaggctttgcaggaaacgctcatccgcgcgctaaggaccttaataatg
aaaaaccacccaaacgaggcctctatttttacaaaacttctcctaaagttgccagatctt
cgctctttaaacaacatgcactctgaggagctcctggcctttaaagttcacccctaa
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