Capra hircus (goat): 102173206
Help
Entry
102173206 CDS
T02910
Symbol
TAF4
Name
(RefSeq) LOW QUALITY PROTEIN: transcription initiation factor TFIID subunit 4
KO
K03129
transcription initiation factor TFIID subunit 4
Organism
chx
Capra hircus (goat)
Pathway
chx03022
Basal transcription factors
chx05016
Huntington disease
Brite
KEGG Orthology (KO) [BR:
chx00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
102173206 (TAF4)
09160 Human Diseases
09164 Neurodegenerative disease
05016 Huntington disease
102173206 (TAF4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
chx03021
]
102173206 (TAF4)
03036 Chromosome and associated proteins [BR:
chx03036
]
102173206 (TAF4)
Transcription machinery [BR:
chx03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
102173206 (TAF4)
Coactivators
SAGA/TFTC/STAGA complex
102173206 (TAF4)
Chromosome and associated proteins [BR:
chx03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
TFTC complex
102173206 (TAF4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TAF4
TAFH
tRNA-synt_1c
Motif
Other DBs
NCBI-GeneID:
102173206
NCBI-ProteinID:
XP_017913087
EnsemblRapid:
ENSCHIG00000012545
LinkDB
All DBs
Position
13:54417790..54483109
Genome browser
AA seq
1060 aa
AA seq
DB search
MAAGSDLLDEVFFNSEVDEKVVSDLVGSLESQLAASAAHHHHLAPRAPEARAAAAGALGN
HVGAGAVPAEGAPAAAPEPPPAGRARRGLSAGGRRPGPRPHRAAPLVSAGPAAKLSALEA
GAGAGAGAGAGAAAGACPPGAAAAPEPAAKPAARNGPPGGPGAAQTLNGSAALGNSLRAA
AAPAVSLLHNGPAPAPPPPKPAAATVIQTPPFLGAPAAPAPXRPSPPAAPAPAAPCAPAP
AAAAPPPPPPAAASLARPPGPPAGPPAAAQNGGSAAPAPAPTPAPAPAPAPAPAPAPAPA
ANSQPGPAAAPAQVAKADSPKTALQPAPPPPQTLATSCPAGAGSGMILGPTMQGALPAAA
AAGLPPPAPGTPTGLPKGSASAVTQSLPRTPSATTGGIRATLTPTVLAPRLPQPPQNPTN
IQNFQLPPGMVLVRSENGQLLMIPQQALAQMQAQAHAQAQPQTTMAPRPATPTSAPPVQI
STVQAPGTPIIARQVTPTTIIKQVSQAQTTVQPSTALQRSPGVQPQLVLGGAAQTTSLGT
ATAVQTVTPQRTVPGATTTSTAATETMENVKKCKNFLSTLIKLASSGKQSTETAANVKEL
VQNLLDGKIEAEDFTSRLYRELNSSPQPYLVPFLKRSLPALRQLTPDSAAFIQQSQQQPP
ASQATTALTAVVLSGSVQRTAGKTAATVTSALQPPVISLTQPTQVGVGKQGQPTPLVIQP
PPKPGALIRPPQVTLTQTPMVALRQPHNRIVLTTPQQIQLNQLQPVPVVKPAVLPGTKAL
STVSAQAAAAQKNKLKEPGGGSFRDDDDINDVASMAGVNLSEESARILATNSELVGTLTR
SCKDETFLLPAPLQRRILEIGKKHGITELHPDVVSYVSHATQQRLQNLVEKISETAQQKN
FSYKDDDRYEQASDVRAQLKFFEQLDQIEKQRKDEQEREILMRAAKSRSRQEDPEQLRLK
QKAKEMQQQELAQMRQRDANLTALAAIGPRKKRKVDSPGPGSGPEGSGPGSAVPGSSGVG
TPRQFTRQRITRVNLRDLIFCLENERETSHSLLLYKAFLK
NT seq
3183 nt
NT seq
+upstream
nt +downstream
nt
atggcggcgggctcggatctgctggacgaggtcttcttcaacagcgaggtggacgagaaa
gtggtgagcgacctggtgggctcgctcgagtcgcagctggcggccagcgcggcccaccac
caccacctcgcgccccgcgcgcccgaggcgcgggccgcggccgccggcgcgctcgggaac
catgtcggagccggagccgtgccggccgagggcgcgcccgcagcggcgccggagccgccc
cccgcaggtagagcgcggcgcggcctgagcgcgggcggccgccggccgggcccgcgtcct
caccgcgccgccccgcttgtctccgcagggcccgccgcgaagctgagcgcgctcgaggcc
ggcgcgggcgccggggccggagccggagcgggcgccgcggccggggcctgcccgccgggg
gcagcggccgcgcccgagcccgccgccaagcctgccgcccgcaacggcccgcccggcggc
cccggcgccgcgcaaactttgaatgggagcgccgcgctggggaactcgctccgcgccgcc
gccgcacctgctgtcagcctgctccacaacgggcccgcgcccgcgccgccgccgcccaag
cccgccgccgccactgtcatccagacgccgcccttcctcggcgcccccgccgcgcccgcg
cccncgcgtccctcgccccccgcggcccctgcgcccgccgcgccctgcgcccccgcgccc
gccgccgccgccccgccgccaccgccgcccgcggccgccagcctggcccggccgcccggg
cccccggccggacccccggcggccgcgcagaacgggggcagcgccgcccccgcgcccgcc
cccacgcccgcccccgcgcccgccccggcccccgcgcccgcgcccgccccggcgcccgcc
gccaacagtcagcccgggcccgccgccgcgcccgcgcaggtggccaaggccgactcgccc
aagaccgctttgcagccggcgcccccgccgccgcagaccctggcgaccagctgcccggcc
ggcgcggggtccggcatgatcctcgggccaactatgcaaggggcactgcccgccgccgcc
gccgccggcctcccgccgccggccccgggcacccccaccgggctgcccaagggctcggcc
agcgcggtgacccagagcctgcccaggacgccctcggccaccaccggcgggatccgggcc
acgctgacgcccacggtcctcgccccacgcctgccgcagccgccgcagaaccccaccaac
atccagaacttccagctgcccccaggtatggtcctcgtgcggagcgagaatgggcagctg
ctcatgatccctcagcaggccctggctcagatgcaggcccaggcccatgcccaggcacag
ccgcagaccaccatggcgccgcgcccggccacccccacaagtgcccctcccgtgcagatc
tccaccgtgcaggcgcccgggacccccattattgcacggcaggtgaccccaacgaccata
atcaagcaggtgtctcaggcccagacgacggtacagcccagcaccgcactgcagcgctcg
cccggggttcagcctcagcttgttttgggtggcgctgctcagacaacctcacttgggacg
gcgacagctgttcagacggtgacacctcagcggacggtcccaggggccactaccacctcg
acagctgccacggaaactatggaaaacgtgaagaaatgtaaaaattttttatctacgtta
ataaaactggcttcgtctggtaaacagtctacagagacagccgctaatgtgaaagaactg
gtacagaatctgctggatggaaaaatcgaagcagaagatttcactagtaggttataccga
gaacttaattcttcacctcaaccttaccttgtgcctttcctgaagaggagcttgcccgcc
ttgagacagctgacccccgactccgcagccttcatccagcagagccagcagcagccaccg
gcctcacaggctaccactgcgctcaccgccgtggtgctcagtggctcggtccagcgcacg
gccgggaagacggcggccaccgtgaccagcgccctccagccccctgtcatcagcctcacg
cagcccacacaggtgggcgtcggcaagcaggggcagcccactccactggtgatccagcca
ccacccaagcctggagcactgatccggccgccgcaggtgacactgacgcagacgcccatg
gtcgcgctccggcagccccacaaccgcatcgtgctcaccacgccccagcagatccagctg
aaccagctgcagccagtccctgtggtgaaacctgctgtgttacctggaaccaaagctctt
tctactgtctccgcacaagctgctgctgcacagaaaaataaactcaaggagcccggggga
ggctcatttcgggacgatgatgacatcaatgacgtagcgtccatggctggagtgaacctg
tcagaagaaagcgcgaggatattggccacaaactctgagttggtgggcaccctgacgagg
tcctgcaaagacgagaccttcctactcccggcacctctgcagagaaggatattagaaata
gggaagaaacatggcatcacggagttgcacccagacgtggtgagttatgtgtcgcatgcc
acgcagcagaggctgcagaacctggtggagaagatatcggagacggcccagcagaagaac
ttctcttacaaggatgatgacagatacgaacaggcaagtgatgtccgggctcagctcaaa
ttttttgaacagcttgatcaaattgaaaaacagagaaaagacgaacaggaaagagagatc
ttaatgcgggcagcaaagtctcgatccagacaagaagatccagaacagttaaggttgaaa
cagaaggcaaaggagatgcagcaacaagaactggcacagatgaggcagcgagatgccaac
ctcacagcactagccgctatcgggccccggaaaaagaggaaagtggactccccgggaccg
ggatcgggaccagagggctcgggcccaggctcggcggtcccaggcagttccggcgtcgga
acccccagacagttcacgcggcaaaggatcacgcgggtcaacctcagggacctcatattt
tgtttagaaaatgaacgcgagacaagccattcactgttgctgtacaaagcattccttaag
tag
DBGET
integrated database retrieval system
