Capra hircus (goat): 102173499
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Entry
102173499 CDS
T02910
Symbol
LIG3
Name
(RefSeq) DNA ligase 3
KO
K10776
DNA ligase 3 [EC:
6.5.1.1
]
Organism
chx
Capra hircus (goat)
Pathway
chx03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
chx00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
102173499 (LIG3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
chx03400
]
102173499 (LIG3)
Enzymes [BR:
chx01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.1 DNA ligase (ATP)
102173499 (LIG3)
DNA repair and recombination proteins [BR:
chx03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Short Patch-BER factors
102173499 (LIG3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_ligase_A_M
DNA_ligase_A_N
LIG3_BRCT
zf-PARP
DNA_ligase_A_C
BRCT_2
RNA_ligase
Synaptonemal_3
mRNA_cap_enzyme
Motif
Other DBs
NCBI-GeneID:
102173499
NCBI-ProteinID:
XP_017919719
EnsemblRapid:
ENSCHIG00000023884
LinkDB
All DBs
Position
19:complement(14713967..14735131)
Genome browser
AA seq
1003 aa
AA seq
DB search
MTLAFKILFPPTLRALGKKELCLFREQHHRPDIRHFGQWSETVLRGDHLLQRRKPVPSFR
ESNLRPRAACLVFLPGSHVGLCSGPCEMAEQRFCVDYAKRGTAGCKKCKEKIVKGVCRIG
KVVPNPFSEAGGDMKEWYHIKCMFEKLERARATTKKIEDLTELEGWEELEENEKEQISQH
IADLSSKATSTPKKKAVVQAKLTATGQVASPVKGASFVTNSNPRKFSGFSAKPNNSGEAH
SSPTPKTPKTSLSSSKCDPKHKDCLLREFRKLCAMVAENPSYNTKTQIIQDFLQKGSAGD
GFHGDVYLTVKLLLPGVIKSVYNLNDKQIVKLFSRIFNCSADDMTRDLEQGDVSETIRVF
FEQSKSFPPAAKSLLTIQEVDEFLLRLSKLTKEDEQQQALQDIASRCTANDLKCIIRLIK
HDLKMNSGAKHVLDALDPNAYEAFKASRNLQDVVERVLRNEQEVEKEPGQRRALSVQASL
MTPVQPMLAEACKSIEYAMKKCPNGMFSEIKYDGERVQVHKKGDHFSYFSRSLKPVLPHK
VAHFKDFIPRAFPGGHSMILDSEVLLIDNRTGRPLPFGTLGVHKKAAFQDANVCLFVFDC
IYFNDVSLMDRPLCERRKLLYDNMVEIPNRIMFSEMKQVTKASDLVDMINRVIREGLEGL
VLKDVKGTYEPGKRHWLKVKKDYLNEGAMADTADLVVLGAFYGQGSKGGMMSIFLMGCFD
PSSQKWCTVTKCAGGHDDATLARLQTELDMVKISKDPSKIPNWLKINKIYYPDFIVPDPK
KAAVWEITGAEFSKSEAHTADGISIRFPRCTRIRDDKDWKSATNLPQLKELYQLSKERAA
FAITAGDEGSSAAGGSSGESEGTSGPAVPHKAPRASPKQPPASAKKAGGKPGGCTSRGGN
LPAAKPSPVRVGVKRKAPDVTPCQAKVLLDIFTGVRLYLPPSTPDFSRLRRYFVAFDGDL
VQEFDVASATHVLGGRDRNPEAQQVSPEWIWACIRKRRLVAPC
NT seq
3012 nt
NT seq
+upstream
nt +downstream
nt
atgactttggcttttaagatcctcttcccaccaactctccgtgcactcgggaaaaaagaa
ctgtgcctattccgagaacaacatcaccggcctgacataagacactttggccagtggtca
gagacagttcttcgtggagaccacctcctccagagaagaaagcctgttccgtcctttcgg
gaaagcaacctgagaccacgtgccgcctgccttgttttcttgccagggtcgcatgtggga
ctctgcagtggtccctgtgaaatggcagaacaacgcttctgtgtggactacgccaagcgt
ggcaccgccggctgcaaaaaatgcaaggaaaagattgtcaagggagtatgccgaatcggc
aaagtggtgcccaatcccttttcagaggcggggggcgatatgaaagagtggtaccacatt
aaatgtatgtttgagaaactggagcgggcccgggccaccacaaaaaaaattgaggacctc
accgagctggaaggctgggaagagctggaagagaatgagaaagagcagataagtcagcac
attgcagatctatcttccaaggcaacaagcacaccaaagaagaaagctgttgtccaggct
aagttgacagccactggccaggtagcatctccagtgaaaggtgcctcatttgtcaccaat
tccaatccccgaaagttttctggcttttcagccaagcccaacaactctggggaagcccac
tccagcccaacccctaagacccctaagacaagtctgtcctcaagcaaatgtgacccgaaa
cacaaggattgtctgctgcgtgagtttcggaagttgtgtgccatggtggctgaaaatcct
agctacaacacgaaaacccagatcatccaggacttccttcagaaaggctcagcaggagat
ggtttccacggtgacgtgtacctaacagtgaagctgctgctgccgggtgtcattaagagt
gtttacaacttgaatgataagcagatcgtgaagcttttcagccgcatttttaactgcagc
gcggatgacatgacacgagacctggagcagggtgacgtgtcagagacaatcagagtcttc
tttgagcagagcaagtctttccctccagctgccaagagcctccttaccatccaggaggtg
gacgaattcctcctgcggctctccaagctcaccaaggaggatgagcagcaacaggccctg
caggatatcgcctccaggtgtacagccaacgaccttaagtgcatcatcaggctgatcaag
catgatctgaagatgaactcaggtgcaaaacacgtgttagatgccctagaccccaatgcc
tatgaagccttcaaagcctcacgcaacctgcaggatgtggtggagcgggtcctccgcaac
gagcaggaggtggagaaggagccaggccagagacgagctctgagtgtccaggcctctctg
atgaccccagtgcagcccatgctggctgaggcctgcaagtccatcgagtatgccatgaag
aagtgtccgaacggcatgttctctgagatcaagtacgacggggagcgagtccaggtgcat
aaaaagggggaccacttcagttacttcagccgcagtctcaagcccgtcctgccacacaag
gtggcccactttaaggacttcatcccccgggctttccctgggggccacagcatgatcttg
gactctgaggtgctcctgattgacaacaggacaggcagaccactgccctttgggactctg
ggagtgcacaagaaagctgccttccaggatgctaatgtctgcctgtttgtttttgattgt
atctacttcaatgatgtcagcttgatggataggcctctgtgtgagcggcggaagcttctt
tatgacaacatggtggaaattcccaaccggatcatgttctcagaaatgaagcaagtcaca
aaagcttccgacttggtggacatgatcaacagggtgatccgagaggggctggaagggctg
gtgctgaaggacgtgaagggtacatatgagcctggaaagcggcattggctgaaagtgaag
aaagactatttgaatgagggtgccatggccgacacagctgacctggtggtgcttggggcc
ttctacgggcaagggagcaaaggtggcatgatgtccatcttcctcatgggctgcttcgac
ccgagcagccagaagtggtgcaccgtcaccaagtgtgcaggaggccacgacgacgcgacg
ctcgcccgcctgcagaccgaactggacatggtgaaaatcagcaaggatcccagcaagata
cccaactggctgaaaatcaataagatctactaccctgacttcatcgttccagacccaaag
aaagctgccgtgtgggagatcacaggggctgaattctcaaaatctgaggctcacacagcc
gatgggatctccatccgattccctcgctgcacccgaatccgtgatgataaggactggaag
tctgccacgaacctcccccaactcaaggagctgtaccaactgtccaaggagcgggcggcc
ttcgccataacggccggggatgaggggagctccgccgcaggaggcagcagcggggaaagc
gagggcacctcagggccggctgtgcctcacaaggccccgagagcctcccccaagcagcct
cccgccagcgccaagaaggctgggggcaagccgggcggctgcaccagcagaggcggcaac
ctaccagctgcaaagccctcccctgtgagagtgggggtgaagcggaaggctcctgatgtg
accccgtgccaagccaaggtgctgctggacatcttcactggagtgcggctctacctgcca
ccctccacgccagactttagccgcctcagacgctactttgtggcattcgatggggacctg
gtgcaggaatttgatgtggcctcagccacacacgtgctgggtggcagggacaggaacccc
gaggcccagcaggtctccccggagtggatctgggcatgtatccggaaacggaggctggtg
gctccttgctag
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