Capra hircus (goat): 102173794
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Entry
102173794 CDS
T02910
Symbol
BARD1
Name
(RefSeq) BRCA1-associated RING domain protein 1 isoform X1
KO
K10683
BRCA1-associated RING domain protein 1
Organism
chx
Capra hircus (goat)
Pathway
chx03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
chx00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
102173794 (BARD1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
chx03019
]
102173794 (BARD1)
04121 Ubiquitin system [BR:
chx04121
]
102173794 (BARD1)
03036 Chromosome and associated proteins [BR:
chx03036
]
102173794 (BARD1)
03400 DNA repair and recombination proteins [BR:
chx03400
]
102173794 (BARD1)
Messenger RNA biogenesis [BR:
chx03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Negative regulators of mRNA 3' end processing
102173794 (BARD1)
Ubiquitin system [BR:
chx04121
]
Ubiquitin ligases (E3)
Multi subunit Ring-finger type E3
BRCC complex
102173794 (BARD1)
Chromosome and associated proteins [BR:
chx03036
]
Eukaryotic type
Centrosome formation proteins
Centrosome duplication proteins
Regulators of centriole replication
102173794 (BARD1)
DNA repair and recombination proteins [BR:
chx03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA1-core complex
102173794 (BARD1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_6
Ank_4
Ank
Ank_2
Ank_5
Ank_3
BRCT
BRCT_2
zf-RING_5
zf-C3HC4
zf-C3HC4_2
RTT107_BRCT_5
Motif
Other DBs
NCBI-GeneID:
102173794
NCBI-ProteinID:
XP_013828006
EnsemblRapid:
ENSCHIG00000021676
UniProt:
A0A452FJ90
LinkDB
All DBs
Position
2:32994477..33081343
Genome browser
AA seq
775 aa
AA seq
DB search
MQGNRQPRVRSGNQSHPAPAMKPAGRGAWAHSRAALDRLEKLLRCSRCTNILREPVCLGG
CEHIFCSYCVSDCIGSECPVCYTPAWIQDVKINRQLDSMIQLCSKLRNLLHDTDLSDMKE
ETSRKHLFKDAQSKKNSIKMWFSPRSKKVRYTVSKLSVQTHPSVKNDENAQQTSMYEFVS
MTPPVEVSERPKKPSTKSRKKQKKKTLAEVNQKWNLEAEKEDGDLDSKEESKEKLVSFCS
QPSVIPNLQINGEIDLLASGSVTESESFGSLAEVFLPLAEHIESPEIESKNEVVTPEKTV
SANCLPSEKSLPSGCNGKRGHHNRISSPVSKRCRSSSQSTGGNSVKPTVLSENTPLPACS
SPPSNKKAGDTLRRRSHTILDESISLSPGTPPSALNSPSYRRMMCSPSATKLWPISLTAV
KRNHRGETLLHIASIKGDIPSVEYLLQSGSDPNVKDHAGWTPLHEACNHGHLKVVELLLQ
HKALVNTTGYQNDSPLHDAVKNGHVDIVKLLLAYGASREAVNIFGLRPVDYADSKDMKSL
LLLPEKNASSSISHCSVVNTGQRRDGPLALIGSGLSSEQQKMLSELVTILKAKKCAEFDS
TVTHVIVPGDTVQSTLKCMLGILSGCWILKFEWVKACLQSKECEQEEKYEIPEGPQKSRL
NREQLLPKLFDGCYFYLGGTFKHHPKDNLIKLVAAGGGQILIRKPKPDSDVTQTINTVAY
HAKPDSDQRFCTQYIIYEDLSNYRPERVRQGKVWMAPSSWFIDCVMSFELLPLDN
NT seq
2328 nt
NT seq
+upstream
nt +downstream
nt
atgcaggggaaccggcagccgagggtccgctctgggaaccagtctcatcctgcgcccgcc
atgaagccggcaggtcgcggggcctgggcccacagccgcgccgcgcttgaccggctggag
aagctgctgcgctgctcacgctgcactaatattctgagggagcctgtgtgcttaggcgga
tgtgagcacatcttctgtagttattgtgtaagtgactgcattggaagcgaatgtccagtg
tgttataccccagcctggatacaagatgtgaagataaacagacagctggacagcatgatc
cagctctgtagtaagcttcggaatttgctgcacgacactgatctttcagatatgaaagaa
gaaacatctaggaaacatttatttaaagatgcacaaagtaagaagaattcaataaaaatg
tggtttagtcctcgaagtaagaaagtcagatatactgtgagtaaactttcagtgcaaacc
cacccttctgtgaaaaatgatgaaaatgctcagcagacctccatgtacgaatttgtctct
atgacccctccggtggaggtttctgagaggcctaagaagccttccacaaaatctagaaaa
aaacagaaaaagaaaaccttagctgaagtcaaccaaaaatggaatttagaggcagaaaag
gaagatggtgaccttgactccaaagaggaaagtaaggaaaagctggtatccttctgtagc
caaccatctgtgattcctaacctgcagataaatggtgaaatagacttactagcaagtggg
tccgtaacagaatctgaaagtttcggaagcttggctgaagtctttttaccattggctgag
catatagagtctccagaaattgaaagcaagaatgaagtagtgactcctgaaaagacagtc
tctgcaaactgtcttccgtccgagaaatctttgccatcaggttgtaatgggaagcgtggg
catcacaacagaatttccagtcctgtttctaagagatgcagaagcagcagccagagcact
ggtggaaactctgttaagccaacagtgctctcagaaaacacgccattgcctgcatgttct
tcaccaccttcaaacaaaaaagctggggacacattaaggaggagaagccatactatattg
gatgaatccattagcctgtcaccaggtacgccgccttctgccctgaacagtccaagttac
agacgaatgatgtgtagtccctcagcaacaaagctttggcccattagccttacagctgtg
aagagaaatcatcgaggagagactttgctccatattgcttcaattaagggcgacatccct
tctgttgaatacctcttacaaagtggaagcgaccccaatgttaaagaccatgctggatgg
acaccattgcatgaagcctgcaatcacgggcacctgaaggtggtggaattgctgctccag
cacaaggcgttggtgaataccactgggtatcagaacgactcaccccttcatgacgcagtg
aagaatgggcatgtggacattgtcaagctgctacttgcctatggagcctccagggaggca
gtcaacatatttggtctgcggcctgtggattatgcagacagtaaagatatgaaatcactg
ttgctgctaccggagaagaacgcatcctcatcaatcagccattgctcagtagtaaacact
ggtcagcgtcgggatgggcctcttgcacttataggcagtggactttcttccgaacaacag
aaaatgctcagtgagcttgtaacgattcttaaggctaaaaaatgtgctgagtttgacagt
acagtaactcatgtcattgttcctggggatacagttcaaagcaccctgaaatgtatgctt
ggaattctcagtggatgctggatcctaaaatttgaatgggtgaaagcatgtctacaaagc
aaagaatgtgaacaggaagaaaagtatgaaattcctgaaggaccacagaaaagcaggctc
aacagagaacagctgttgccaaagctgtttgatggatgttacttctatttggggggaacc
ttcaaacaccatccaaaggacaaccttattaagcttgtcgctgccggtgggggccagatc
ctcattagaaagcccaagccagacagtgacgtgactcaaaccatcaatacagttgcgtac
catgccaaacctgattctgatcagcgcttctgcacacagtatatcatctatgaggacttg
tctaattatcgcccagaaagggttcggcagggcaaagtctggatggctccttccagctgg
tttatagattgtgtgatgtcctttgagttgctccctcttgacaactga
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