Capra hircus (goat): 102174052
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Entry
102174052 CDS
T02910
Symbol
CLSTN1
Name
(RefSeq) calsyntenin-1 isoform X1
KO
K22659
calsyntenin 1
Organism
chx
Capra hircus (goat)
Brite
KEGG Orthology (KO) [BR:
chx00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
chx04515
]
102174052 (CLSTN1)
Cell adhesion molecules [BR:
chx04515
]
Cadherins
Cadherin related
102174052 (CLSTN1)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CLSTN_C
Cadherin
Laminin_G_3
Laminin_G_2
CDC45
FAM176
Glyco_hydro_16
EphA2_TM
V_ATPase_I
Cadherin_C_2
Motif
Other DBs
NCBI-GeneID:
102174052
NCBI-ProteinID:
XP_017915869
EnsemblRapid:
ENSCHIG00000013474
LinkDB
All DBs
Position
16:42200194..42276330
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AA seq
980 aa
AA seq
DB search
MLRRPAPALAPAAWLLLAGLLCSGGGWASRVNKHKPWLEPTYHGLVTESDSTVLLDPPLI
ALDKDAPLRFAESFEVTVTKEGEICGFKIHGQNVPFDAVVVDKSTGEGVIRSTEKLDCEL
QKDYTFTIQAYDCGKGPDGASVKRSHKATVHIQVNDVNEYAPVFKEKSYKATVVEGRQYD
SILRVEAVDADCSPQFSQICSYEIVTPDVPFTVDKDGYIKNTEKLNYGKEHQYKLTVTAY
DCGKKRAAEDVLVKISIKPTCTPGWQGWNSRVEYEPGTGALTLFPNVHLETCDESVASVQ
VVVELETSHIGKGCDRDTYSEKSLHRLCGAASGTAELLPSPGGSWNWTVGLPTDNGHDSD
QVFEFNGTQAVRVPDGIISVNPKEPFTISVWMRHGPFGKKKETILCSSDKTEMNRHHYSL
YVHGCRLVFLLRQDPSEEKKYKPAEFHWKLSQVCDEEWHHYVLNVEIPSVTLYVDGVPHE
PFSVTEDYPLHPSKIETQLMVGACWQEYSGVESDNETEPVPLASAGGDLRMTQFFRGNLA
GLTIRSGKLTDKKVIDCLYTCKEGLDLHTPEDNGRGVKIQANPSQSMLTLEGEDVGELDK
AMQHISYLNSRQFPTPGIRRLKITSIVKCFNEAACISIPPVDGYVMVLQPEEPKISLSGI
HHFARAASEFESSEGVFLFPELRIISTITREVEPEGEGDEDPTVQESLVSEEIVHDLDTC
EVTVEGEELNGEQESLEVDAARLQQKGIEMSSSDMGVVFTGVDTMASYEEILHLLRYRNW
HTRSLLDRRFKLVCSELNGRYVSNEFQVEVNVIHTANPMEHASHIAAQPQFVHPEHRSFI
DLSGHNLANPHPFAVVPSTATVVIVVCVSFLVFMIILGVFRIRAAHQRTMRDQDTGKENE
MDWDDSALTITVNPMETYEDQHSSEEEEEEEEEESEDGDEEDDITSAESESSEEDEGEHG
DPQTANRQQQLEWDDSTLSY
NT seq
2943 nt
NT seq
+upstream
nt +downstream
nt
atgctgcgccgccctgcgcccgcgctggccccggccgcctggctgctgctggccgggctg
ctctgcagcggcgggggctgggcctcgcgagtcaacaagcacaagccatggctggagccc
acatatcatggcttagttacggagagcgacagcaccgtgctcctcgacccccctctcatc
gccctggacaaagacgctcctttgcgcttcgcagagagttttgaggtgacagtcaccaaa
gaaggtgagatttgtggatttaagattcacggacagaatgtgccctttgacgcagtggtg
gtggataaatccactggcgagggggtcattcgctccacagagaagctggactgtgagctg
cagaaggactacacgttcaccatccaggcctatgactgtgggaaggggccagacggggcc
agtgtaaaaagatctcacaaagcaactgtccacattcaggtgaatgacgtcaacgaatat
gcgcccgtgttcaaggagaagtcctacaaagccacagtggtggaggggaggcagtacgac
agcatcttgagggtggaggcggtggacgcagactgctccccccagttcagccaaatctgc
agctatgagatcgtcaccccggacgtgccattcactgtcgacaaagatggttacataaaa
aacacagagaagctgaactatggtaaagagcaccagtacaagctgactgtcacggcctat
gactgcgggaagaaaagagcggcagaagacgttttggtgaagatcagcatcaagcccacc
tgcacccctggctggcaaggatggaacagcagggtcgaatacgagcctggcactggcgct
ctgacactctttccgaatgtccacctggaaacgtgtgacgagtcggtggcctcggtgcag
gtagtggtggagctggagaccagccacatcgggaagggctgtgaccgtgacacctactcc
gagaaatcacttcaccggctctgcggtgctgcgtctggcacggctgagctgctgccttcc
ccaggaggctcctggaactggactgtcggccttcccacggacaacggtcatgacagcgac
caggtcttcgagttcaacggcactcaggcggtgagggtccctgatggcatcatctctgtc
aaccccaaggagcccttcacgatctctgtgtggatgaggcacgggccatttggcaagaag
aaggagacgattctttgcagctcagacaaaacagagatgaaccgacaccattactcactc
tatgtccacggctgccggctggttttcctcctccgtcaggatccttcagaagagaagaaa
tacaaacctgcagagttccactggaagctgagtcaggtctgtgacgaggaatggcatcac
tatgtcctcaacgtggaaatccccagtgtgaccctctacgtggacggtgtccctcatgag
cccttctctgtcactgaagattacccacttcatccatccaagatcgaaacccagctcatg
gttggggcttgctggcaagagtattcaggagttgaaagtgacaatgaaactgagcctgtg
cctctggcctccgcaggtggtgacttgcgcatgacccagtttttccgaggtaatctggct
ggcctgaccatccgttctgggaagctcacagataagaaggtgattgactgtctgtatacc
tgcaaagaggggctagacctgcacacccccgaagacaatggcagaggtgtcaagatccag
gccaaccctagtcagtcgatgttgaccttggagggagaggacgtgggggagcttgataag
gccatgcaacacatttcctaccttaattcacgacagttccccaccccagggatccgaaga
ctcaaaatcaccagcatagtcaagtgttttaacgaggccgcctgcatctccatccccccg
gtggatggctacgtgatggttttgcagccagaagagcccaaaatcagtctgagcggcatc
caccattttgctcgagcggcttctgaatttgaaagctcagagggggttttcctcttccct
gagcttcggatcatcagcaccatcacgagagaagtggagcccgaaggggaaggggatgag
gacccaacagttcaagagtcactggtgtcggaggagatcgtgcacgacctggacacctgt
gaggtcacagtggagggagaagaactgaatggagagcaggagagcctggaggtggacgcg
gcccgcctgcagcagaagggcattgaaatgagcagctctgacatgggcgtggtcttcaca
ggtgttgacaccatggccagctacgaggagatcttacatctcctgcgctatcggaactgg
cacaccaggtccttgcttgaccgcaggttcaagcttgtctgctctgagctgaatggtcgc
tatgtcagcaatgagttccaggtggaggtgaatgtcatccacacggccaaccccatggag
cacgccagccacatagccgcccagccgcagttcgtccatcccgagcaccgctccttcatt
gacctctctggtcacaacctggccaatccccacccatttgcagtcgtccccagcactgcc
accgtcgtcattgtggtgtgcgtcagcttcctggttttcatgatcatcctgggggtgttc
cggatccgggctgcacaccagaggaccatgcgggaccaggacaccgggaaagagaacgag
atggactgggacgactctgccctgaccatcaccgtgaaccccatggagacatacgaggac
cagcatagcagtgaggaggaagaggaggaggaggaagaggagagcgaggatggggacgag
gaggacgacatcaccagtgccgagtcggagagcagtgaggaggacgagggggagcacggg
gacccgcagactgcgaaccggcagcagcagctggagtgggacgactccaccctcagctac
tga
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