Capra hircus (goat): 102180254
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Entry
102180254 CDS
T02910
Symbol
HDAC5
Name
(RefSeq) histone deacetylase 5 isoform X1
KO
K11406
histone deacetylase 4/5 [EC:
3.5.1.98
]
Organism
chx
Capra hircus (goat)
Pathway
chx04371
Apelin signaling pathway
chx04613
Neutrophil extracellular trap formation
chx05034
Alcoholism
chx05203
Viral carcinogenesis
chx05206
MicroRNAs in cancer
Brite
KEGG Orthology (KO) [BR:
chx00001
]
09130 Environmental Information Processing
09132 Signal transduction
04371 Apelin signaling pathway
102180254 (HDAC5)
09150 Organismal Systems
09151 Immune system
04613 Neutrophil extracellular trap formation
102180254 (HDAC5)
09160 Human Diseases
09161 Cancer: overview
05206 MicroRNAs in cancer
102180254 (HDAC5)
05203 Viral carcinogenesis
102180254 (HDAC5)
09165 Substance dependence
05034 Alcoholism
102180254 (HDAC5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
chx03036
]
102180254 (HDAC5)
Enzymes [BR:
chx01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.98 histone deacetylase
102180254 (HDAC5)
Chromosome and associated proteins [BR:
chx03036
]
Eukaryotic type
Histone modification proteins
HDACs (histone deacetylases)
Class II HDACs
102180254 (HDAC5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Hist_deacetyl
HDAC4_Gln
TFIIA
Motif
Other DBs
NCBI-GeneID:
102180254
NCBI-ProteinID:
XP_017920686
EnsemblRapid:
ENSCHIG00000016811
LinkDB
All DBs
Position
19:complement(43553898..43590779)
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AA seq
1194 aa
AA seq
DB search
MPDCLAPKDGLGWALEAQRPRAPVPSVCLLSSVSLDITAAPPPPVPAPNASFLQAQSRHE
LSHRVGSLPSAARNSLWVGLQAALCTADGMPGREPALEILPRTPLHGIPVTVEVKPVLPG
AMPSSMGGGGGGSPSPVELRGALAGPVDPALREQQLQQELLALKQQQQLQKQLLFAEFQK
QHDHLTRQHEVQLQKHLKQQQEMLAAKRQQELEQQRQREQQRQEELEKQRLEQQLLILRN
KEKSKESAIASTEVKLRLQEFLLSKSKEPTPGGLNHSLPQHPKCWGTHHASLDQSSPPQS
GPPGTPPSYKLPLLGPYDSRDDFPLRKTASEPNLKVRSRLKQKVAERRSSPLLRRKDGTV
ISTFKKRAVEITGAGPGVSAVCNSAPGSGPSSPNSSHSTIAENGFTGSVPNIPTEMLPQH
RALPPDTSPNQFSLYTSPSLPNISLGLQATVTVTNSHLTASPKLSTQQEAERQALQSLRQ
GGALTGKFMSTSSIPGCLLGVALEGDSSPHGHASLLQHVLLLEQARQQSTLIAVPLHGQS
PLVTGERVATSMRTVGKLPRHRPLSRTQSSPLPQSPQALQQLVMQQQHQQFLEKQKQQQL
QLGKILTKTGELPRQPTTHPEETEEELTEQQDALLGEGALTIPREGSTESESTQEDLEEE
EEEEEEEEEEEDCIQVKDEERESGAEEGPDLEESSAGYKKAFADTQQLQPLQVYQAPLSL
ATVPHQALGRTQSSPAAPGGLKSPPDQPTKHLFTTGVVYDTFMLKHQCMCGNTHVHPEHA
GRIQSIWSRLQETGLLSKCERIRGRKATLDEIQTVHSEYHTLLYGTSPLNRQKLDSKKLL
GPISQKMYAMLPCGGIGVDSDTVWNEMHSSSAVRMAVGCLVELAFRVAAGELKNGFAIIR
PPGHHAEESTAMGFCFFNSVAITTKLLQQKLNVGKVLIVDWDIHHGNGTQQAFYNDPSVL
YISLHRYDNGNFFPGSGAPEEVGGGPGVGYNVNVAWTGGVDPPIGDVEYLTAFRTVVMPI
AHEFSPDVVLVSAGFDAVEGHLSPLGGYSVTARCFGHLTRQLMTLAGGRVVLALEGGHDL
TAICDASEACVSALLSVELQPLDEAVLQQKPNVNAVATLEKVIEIQSKHWSCVQRFAAGL
GRSLREAQAGETEEAETVSAMALLSVGAEQAQAAAAREHSPRPAEEPMEQEPAL
NT seq
3585 nt
NT seq
+upstream
nt +downstream
nt
atgcctgactgcctcgccccgaaggatggcctcggatgggcgttagaggcacagcggccc
cgggctcctgtcccgtccgtctgtctgttatcgtctgtctctcttgacatcaccgcagct
ccaccccctcccgtcccagcccccaacgccagcttcctgcaggcccagagccggcatgaa
ctctcccaccgagtcgggagcctgcctagtgctgccagaaatagtctgtgggtgggactc
caggcagctttgtgcacggcagatgggatgccaggccgggaaccagccttggaaatcctg
ccccggacccctctgcacggcatccctgtgacagtagaggtgaaaccggtgctgccagga
gccatgcccagctccatggggggcgggggaggaggcagccccagccccgtggagctgcgg
ggggctctggcaggccctgtggaccccgcgctgcgggagcagcaactgcagcaggagctc
ctggcgctcaagcagcaacagcaattgcagaagcagcttctgttcgctgagttccagaaa
cagcatgaccacctgacccggcagcatgaagtccagctgcagaagcacctcaagcagcag
caggagatgctggcagccaagaggcagcaggagctggagcagcagcggcagcgggagcag
cagcggcaggaggagctggagaagcagcggctcgagcagcagctgctcatccttcgaaac
aaggagaagagcaaagagagtgccatcgccagcactgaggtgaagctacggctccaggaa
ttcctcctgtcgaagtcaaaggagcccacaccaggcggcctcaaccattccctcccacag
catcctaaatgctggggaacccaccatgcttctttggaccagagttcccctccccagagc
ggcccccctgggacgcctccctcctacaaactgcctttgcttgggccctatgacagccgc
gatgacttccccctccgcaaaacagcctccgaacccaacttaaaagtacgttcgaggcta
aagcagaaggtggccgagcggagaagcagtcccctcttgcgtcgcaaggatgggactgtc
attagcacctttaagaagagagctgttgagatcacaggtgccggacctggggtgtccgcc
gtgtgtaatagcgcgccaggctctggccccagctctcccaacagctcccacagcaccatc
gcggagaatggctttacgggctcggttcccaacatccccaccgagatgctcccccagcac
cgggccctccctccggacacctcccccaaccagttcagcctctacacgtctccctctctg
cccaacatctccctagggctgcaggccacggtcacagtcaccaactcgcacctcaccgcc
tccccgaagctgtcgacgcagcaggaggccgagaggcaggccctccagtccctgcggcag
ggcggtgcactgaccggcaagttcatgagcacatcctccatccctggctgcctgctgggc
gtggcactggagggcgactcgagcccccacgggcatgcctcattgctgcagcacgtgctg
ctgctggaacaagcccggcagcagagcaccctcattgctgtgccgctccacgggcagtcc
ccgctggtgacgggtgagcgcgtggccaccagcatgcggacagtgggcaagctcccgcgg
caccggcccctgagccgcacccagtcctcgccgctgccccagagcccccaggccctgcag
cagctggtcatgcagcagcagcaccagcaattcctggagaagcagaagcagcagcagctg
cagctgggcaagatccttactaagacgggggagctgccacggcagcccaccacccacccc
gaggagacagaggaggagctgacggagcagcaggacgccttgctgggggagggagccctc
accataccccgagaaggctccacggagagtgagagcacccaggaagacctggaggaagag
gaagaggaggaggaggaagaggaggaggaggaggactgcatccaggtcaaggatgaggag
cgcgagagcggtgctgaagaagggcccgacttggaggagtccagtgctggctacaaaaag
gcatttgcagacacccagcagctgcagccgctgcaggtataccaggcacccctcagcctg
gccactgtgccccaccaggccctgggccgcacccagtcctcacctgctgcccctgggggc
ttgaagagccccccagaccagcccactaagcacctcttcaccacaggtgtggtctacgac
acgttcatgctgaagcaccagtgcatgtgcgggaacacacatgtgcaccccgagcacgct
ggccggatccagagcatctggtcccggctgcaggagacaggcctgctcagcaagtgtgag
cgaatccggggtcgtaaagccacgctggatgagatccagacggtgcactccgagtaccac
accctgctctacggtaccagccccctcaaccggcagaagctggacagcaagaagctgctc
ggccccatcagccagaagatgtacgccatgctgccttgcgggggcattggggtggacagc
gacactgtgtggaacgagatgcactcctccagcgccgtgcgcatggcggtgggctgcctg
gtggagctggcattcagggtggccgcaggggagctcaagaatggatttgccatcataagg
cccccaggacaccacgcggaagaatccacagccatgggattctgcttcttcaactcagta
gctatcacaaccaagctcctgcagcagaagttgaatgtgggcaaggttctcatcgtggac
tgggacattcaccatggcaacggcacccagcaagcattttacaacgatccctccgtgctc
tacatctccctgcatcgctatgacaatgggaacttctttccgggctccggggctcctgaa
gaggttggcggagggccgggcgtggggtacaatgtgaatgtggcgtggacaggaggtgtg
gacccccccatcggagacgtggagtacctaacagccttcaggacagtggtgatgcccatt
gcccacgagttctcacctgatgtggtcctggtctccgctggctttgatgctgttgaggga
cacctgtctccgctgggtggctactctgtcaccgccagatgttttggccacttgaccagg
cagctgatgacgctggcagggggccgggtggtgctggccctggagggaggccacgacctg
accgccatctgtgatgcctctgaggcctgtgtctcggcgctgctcagcgtggagctacag
cccttggacgaggcagtcttgcagcaaaagcccaacgtcaatgcagtggccacgctggag
aaagtcatcgagatccagagcaaacactggagctgtgtgcagaggttcgctgctggccta
ggccgttccctgcgggaggcccaggcaggtgagacagaggaggctgagactgtgagtgcc
atggccttgctgtcggtgggggccgagcaggcccaggcggctgcggcccgggagcacagc
cccaggccggcagaggagcctatggaacaggagcctgccctgtga
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integrated database retrieval system