Capra hircus (goat): 102182607
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Entry
102182607 CDS
T02910
Symbol
LIG4
Name
(RefSeq) DNA ligase 4
KO
K10777
DNA ligase 4 [EC:
6.5.1.1
]
Organism
chx
Capra hircus (goat)
Pathway
chx03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
chx00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
102182607 (LIG4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
chx03400
]
102182607 (LIG4)
Enzymes [BR:
chx01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.1 DNA ligase (ATP)
102182607 (LIG4)
DNA repair and recombination proteins [BR:
chx03400
]
Eukaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
DNA Ligase 4 complex
102182607 (LIG4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_ligase_A_M
DNA_ligase_A_N
BRCT
DNA_ligase_IV
DNA_ligase_A_C
BRCT_2
RNA_ligase
mRNA_cap_enzyme
ATG17_like
Motif
Other DBs
NCBI-GeneID:
102182607
NCBI-ProteinID:
XP_005687798
UniProt:
A0A452DM92
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All DBs
Position
12:2690158..2697707
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AA seq
911 aa
AA seq
DB search
MAASQTSQTVASHVPFADLCSTLERIQKSKGRAEKIRHFKAFLDSWRKFHDALHKNQKDV
TDSFYPAMRLILPHLERERMAYGIKEIMLAKLYVELLNLPRDGKDALKLLNYRTPTGTRG
DAGDFAMIAYFVLKPRCLQKGSLSIKQVNDILDSIASNNSAKRKDLMKKSVLQLITQSSA
LEQKWLIRMIVKDLKLGFSQHTIFSVFHRDAAELHNVTTDLEKVCRQLHDPSVGLSDISI
TLFSAFKPMLAAIADIERIEKDMKHQSFYIETKLDGERMQMHKDGDVYRYFSRNGYNYED
QFGASPQEGSLTPFIHNAFRTDVLNCILDGEMMAYNPNTQTFMQKGNKFDIKRMVEDSEL
QTCYCVFDVLMVNDKKLGHETLRKRFEILNSVFTPVPGRIEIVQKTQAHTKKEVIDALNE
AIDKREEGIMVKHPLSIYKPDKRGEGWLKIKPEYVSGLMDELDILIVGGYWGKGARGGMM
SHFLCAVAEKPASGEKPSVFHTLCRVGSGYTMKELYDLGLKLAKHWKPFHRKAPPSNILC
GTEKPEVYIEPCNSVIVQVKATEIVPSDMYKTGCTLRFPRIEKIREDKEWYECTSLEDLE
QLRGKACGKLASKHLYVSGDDEPQEKKRKAAPKMKKVIGIIEHLKAPNLSNVNRVSTVFE
DVEFCVMSGTSNHPKPDLENRIAELGGYIVQNPGPDTYCVIAGSDNIRVKNIISSDKHDV
VKPEWLLECFRTRSCVPWQPHFMIHMCPSTKQHFAQEYDQYGDSYFVDTDLHQLKEVFSG
IKNAGEQTPGEMSPVIADLEHRYSWASMPLSMFRHHTVYLDLYAVINDLSTRIKGARLAI
TALELRFHGAQVVSYLAEGVSHVIVGEDQSRVADLKAIRRTLKRKFKILQERWVTVSIDK
CELQEENQYLV
NT seq
2736 nt
NT seq
+upstream
nt +downstream
nt
atggctgcctcacaaacctcacagactgttgcatctcacgttccttttgcagatttatgt
tcgactttagaacgaatacagaaaagtaaagggcgtgcagagaaaatcagacacttcaaa
gcatttttagattcttggagaaaatttcatgatgcccttcataagaaccaaaaagatgtc
acagattctttttatccagccatgagacttattcttcctcatctggaaagggagagaatg
gcctatggaatcaaagaaattatgctggctaagctttatgttgaattgcttaacttgcct
cgagatggaaaagatgcccttaagcttttgaactacagaacaccgaccggaacccgtgga
gatgctggagactttgcaatgattgcgtactttgtattgaaacccagatgtctacagaaa
ggaagcctaagcattaagcaagtaaatgacattttagactccattgccagcaataattct
gccaaaaggaaagacctaatgaagaaaagtgttcttcagcttataactcagagttcagca
cttgaacaaaaatggctgatacggatgattgttaaggacctaaagcttggctttagtcag
cacactatattttctgtttttcaccgtgatgctgctgagttgcataatgtcaccacagat
ctggagaaggtctgtaggcaactgcacgatccttcagtaggactcagtgacatttccatc
accctattctctgcctttaaacccatgctggccgctatagcagatattgagcgaattgag
aaggacatgaaacaccagagtttctacatcgaaaccaagctcgacggcgagcggatgcag
atgcacaaggatggggatgtgtaccggtacttctctcgcaatgggtataactatgaggac
cagtttggtgcttccccacaggaagggtccctcacaccattcattcataatgcattcaga
acagatgtgctgaactgtatcctcgacggtgagatgatggcctacaaccctaacacacag
acttttatgcagaaggggaataagtttgatattaaaagaatggtggaagattctgagctg
cagacttgttactgtgtttttgatgtattgatggttaatgataaaaagctaggacatgag
accctgagaaagaggtttgaaattcttaatagtgttttcacacctgtgccaggtagaata
gaaatagtgcagaaaacacaagctcatactaagaaagaagtaatcgatgctttgaatgaa
gcgatagataaaagagaagaggggatcatggtaaaacacccgctgtccatttacaagcca
gataaaagaggtgaaggatggttaaaaattaaaccagagtatgtcagtggactgatggat
gagctggacatcttaatcgtcgggggctactgggggaagggtgcccggggtgggatgatg
tctcattttttgtgcgctgtggcagagaagcccgcttctggtgaaaaaccctcagtgttt
cacactctctgtcgcgttggctcgggttacactatgaaagaactgtacgacctgggtttg
aagttggcgaaacattggaagccttttcataggaaagccccaccaagcaacattctgtgt
ggaacagagaagccagaggtctacatcgagccttgcaattcagtcattgttcaggttaag
gccacagagatcgtccccagtgacatgtataaaaccggctgcacgttgcgttttccacgg
attgagaaaataagagaagacaaagaatggtacgaatgtacatccctggaggacttagag
caacttcgagggaaggcctgtggaaagctcgcgtccaaacacctttacgtgagtggcgat
gatgaaccacaagagaaaaagcggaaagctgccccaaagatgaagaaagtcattggaatt
attgagcacctaaaagctcccaacctttctaacgtaaacagggtttctactgtctttgaa
gatgtggagttttgtgtcatgagtggaaccagcaaccatcccaagcctgacctggaaaac
agaatcgccgaattgggtggttacatagtacagaacccaggcccagacacgtactgtgtg
atcgccgggtctgacaacattcgagtgaagaatatcatctcttcagataaacatgatgtc
gtcaagccagagtggctgctagagtgttttaggactagaagctgtgtgccctggcaaccc
cacttcatgatccacatgtgcccgtcgacaaagcaacactttgcccaggaatacgaccaa
tacggggatagttactttgtcgacacagatttgcaccaactgaaggaagtgttttcggga
attaaaaacgctggtgagcagactcctggggagatgagtcctgtgattgctgatttggaa
cacaggtattcctgggccagcatgcctcttagcatgtttagacaccacaccgtttatttg
gacttgtatgctgtcatcaatgacttaagcaccagaatcaagggagctaggttagccatc
acagccttggagcttcgatttcatggagcacaagtagtttcctatttagctgagggagtg
tctcacgtcattgttggggaagatcagagtcgggttgcagacttgaaagctattcgaagg
actcttaagaggaaatttaaaatcttacaagaacgttgggtcactgtttcaatagacaag
tgtgaattacaggaggaaaatcagtatttggtttga
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