Capra hircus (goat): 102187948
Help
Entry
102187948 CDS
T02910
Symbol
CHD1
Name
(RefSeq) chromodomain-helicase-DNA-binding protein 1 isoform X1
KO
K11367
chromodomain-helicase-DNA-binding protein 1 [EC:5.6.2.-]
Organism
chx
Capra hircus (goat)
Brite
KEGG Orthology (KO) [BR:
chx00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
chx03021
]
102187948 (CHD1)
03036 Chromosome and associated proteins [BR:
chx03036
]
102187948 (CHD1)
Transcription machinery [BR:
chx03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
SAGA/TFTC/STAGA complex
102187948 (CHD1)
Chromosome and associated proteins [BR:
chx03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
SAGA complex
102187948 (CHD1)
SLIK complex
102187948 (CHD1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
CDH1_2_SANT_HL1
CHD1-like_C
Helicase_C
Chromo
DEAD
Motif
Other DBs
NCBI-GeneID:
102187948
NCBI-ProteinID:
XP_017905498
EnsemblRapid:
ENSCHIG00000025395
LinkDB
All DBs
Position
7:12479809..12552922
Genome browser
AA seq
1799 aa
AA seq
DB search
MNGHSDEESVRNSSGESSQSDDDSGSASGSGSGSSSGSSSDGSSSQSGSSDSDSGSESGS
QSESESDNSRENKVQAKPPKVDGAEFWKSSPSILAVQRSAMLKKQQQQQQQRQASSNSGS
EEDSSSSEDSDDSSSEVKRKKHKDEDWQMSGSGSPSQSGSDSESEEERDKSSCDETESDY
EPKNKVKSRKPQNRSKSKNGKKIIGQKKRQIDSSEEEEEDEEEYDNDKRSSRRQATVNVS
YKEDEEMKTDSDDLLEVCGEDVPQPEEEEFETIERFMDCRIGRKGATGATTTIYAVEADG
DPNAGFEKNKEPGEIQYLIKWKGWSHIHNTWETEETLKQQNVRGMKKLDNYKKKDQETKR
WLKNASPEDVEYYNCQQELTDDLHKQYQIVERIIAHSNQKSAAGYPDYYCKWQGLPYSEC
SWEDGALISKKFQACIDEYFSRNQSKTTPFKDCKVLKQRPRFVALKKQPSYIGGHEGLEL
RDYQLNGLNWLAHSWCKGNSCILADEMGLGKTIQTISFLNYLFHEHQLYGPFLLVVPLST
LTSWQREIQTWASQMNAVVYLGDINSRNMIRTHEWMHPQTKRLKFNILLTTYEILLKDKA
FLGGLNWAFIGVDEAHRLKNDDSLLYKTLIDFKSNHRLLITGTPLQNSLKELWSLLHFIM
PEKFSSWEDFEEEHGKGREYGYASLHKELEPFLLRRVKKDVEKSLPAKVEQILRMEMSAL
QKQYYKWILTRNYKALSKGSKGSTSGFLNIMMELKKCCNHCYLIKPPDNNEFYNKQEALQ
HLIRSSGKLILLDKLLIRLRERGNRVLIFSQMVRMLDILAEYLKYRQFPFQRLDGSIKGE
LRKQALDHFNAEGSEDFCFLLSTRAGGLGINLASADTVVIFDSDWNPQNDLQAQARAHRI
GQKKQVNIYRLVTKGSVEEDILERAKKKMVLDHLVIQRMDTTGKTVLHTGSAPSSSTPFN
KEELSAILKFGAEELFKEPEGEEQEPQEMDIDEILKRAETHENEAGPLTVGDELLSQFKV
ANFSNMDEDDIELEPERNSKNWEEIIPEDQRRRLEEEERQKELEEIYMLPRMRNCAKQIS
FNGSEGRRSRSRRYSGSDSDSISERKRPKKRGRPRTIPRENIKGFSDAEIRRFIKSYKKF
GGPLERLDAIARDAELVDKSETDLRRLGELVHNGCIKALKDNSSGTERTGGRLGKVKGPT
FRISGVQVNAKLVISHEEELIPLHKSIPSDPEERKQYIIPCHTKAAHFDIDWGKEDDSNL
LIGIYEYGYGSWEMIKMDPDLSLTHKILPDDPDKKPQAKQLQTRADYLIKLLSRDLAKKE
AQRLSGAGGSKRRKARAKKNKAMKSIKVKEEIKSDSSPLPSEKSDEDDDKDEITSVKHPN
KKIKTERDSEEKTEPDVCIKKEPEEKREAKEKENKRELKREIKEKEDKKDIKEKDFKEKR
ENKVKEAIQKEKDIKEEKLSESKSESKERPKKSSVLDAPVHITASGEPVPIAEESEELDQ
KTFSICKERMRPVKAALKQLDRPERGLSEREQLEHTRQCLIKIGDHITECLKEYTNPEQI
KQWRKNLWIFVSKFTEFDARKLHKLYKHAIKKRQESQQNNDQNSSLNTQVIRNPDVERLK
ENTNHDDSSRDSYSSDRHLSQYHDHHKDRHQGDSYKKSDSRKRPYSSFSNGKDHRDWDHY
KQDSRYYNDREKHRKLDDHRSRDHRSNLEGSLKDRTHSDHRSHSDHRLHSDHRSSSEYAH
HKSSRDYRYHSDWQMDHRASSSGPRSPLDQRSPYGSRSPFEHSIENKSTPEHTWSSRKT
NT seq
5400 nt
NT seq
+upstream
nt +downstream
nt
atgaatggacacagtgatgaagaaagtgttagaaacagtagtggagaatcaagccagtcg
gatgatgattctgggtcagcttccggctctggatctggttcgagttctggaagcagtagt
gacggaagcagtagccagtcaggtagcagcgactcagactctggatccgaatcgggcagt
cagtcggagtctgagtcagacaattcccgagaaaataaagttcaagcaaaaccaccgaaa
gttgatggagctgagttctggaaatctagccctagtattttggccgttcagagatctgca
atgcttaagaagcagcagcagcagcagcagcaacgtcaagcttcatctaatagtggatca
gaggaggattcctctagcagtgaagattccgatgactcatccagtgaggtcaaaaggaaa
aagcataaagatgaagattggcagatgtctggatcggggtcaccctctcagtctggttcg
gattcggaatctgaagaagaaagagataaaagcagttgtgatgaaacagaatcagattat
gagccaaaaaataaagttaaaagtagaaaacctcaaaatcgatctaagtcgaaaaatgga
aaaaagattattggacaaaaaaagagacagattgattcatctgaggaggaggaggaggat
gaagaagaatatgataatgataaaagaagctctcgtcgccaagcaactgtcaatgttagc
tataaggaagatgaagaaatgaaaacagattctgatgacctcctggaagtctgtggagag
gatgttcctcaacctgaggaagaggaatttgaaacaatagaacggtttatggattgtcgg
attggaagaaaaggagctactggtgctactacaaccatctatgcagttgaagcagatggt
gacccgaatgcaggatttgaaaaaaacaaggaaccaggagagatccagtatttaattaaa
tggaaaggatggtcacatatccacaatacttgggagacagaggaaacccttaagcagcaa
aatgttagaggaatgaaaaaattagataattataagaaaaaagatcaggaaacaaaaaga
tggttgaaaaatgcttctccagaagatgtggaatattataattgccagcaagaacttaca
gatgatctccataagcagtatcaaatagtggaacgaataattgctcattccaatcagaag
tcagctgctggctatcctgattattattgcaaatggcagggtcttccatactcagagtgc
agctgggaagatggcgctcttatttccaaaaagtttcaagcatgcatagatgagtatttc
agcaggaatcaatcaaaaaccactccttttaaagactgcaaagtattaaaacaaaggcca
agatttgtagccctaaagaaacagccatcctatattggaggacatgaaggattagaatta
agagattatcaactgaatggtttaaattggcttgctcactcttggtgcaaaggtaatagt
tgcatacttgctgatgaaatgggccttggaaaaacaatacagacgatctcatttctgaac
tatttgtttcatgaacaccaattatatggaccttttctgttagtagtaccactctccact
ctcacttcctggcaaagggagattcagacgtgggcttctcaaatgaatgctgtggtttat
ttaggtgacatcaacagcagaaacatgataagaactcatgaatggatgcatccccagacc
aaacggttaaaatttaatatactgttaacaacttatgaaatcttgctgaaggataaggca
ttccttggaggtctgaattgggcatttataggtgtggacgaagcacatcgattaaagaat
gatgactctcttctgtataaaactttaatagattttaagtccaatcaccgtctccttatc
actggaactcctctgcaaaactccctcaaagagctctggtctttgctacatttcattatg
ccagaaaagttttcttcctgggaagattttgaagaagaacatggcaaaggcagagaatat
ggttatgcaagcctccacaaagagcttgagccatttctgttgcggagggttaagaaagat
gtggaaaaatctcttcctgccaaggttgaacagattttaagaatggaaatgagtgcttta
cagaaacaatattacaagtggatattaactaggaattacaaagccctcagcaaaggttcc
aagggcagtacctcaggctttttgaatattatgatggagctaaagaaatgttgtaaccat
tgctacctcattaaaccaccagataataatgaattctataataaacaggaggccttacaa
cacttaatccgtagtagcggaaaactaattcttcttgacaaactgttaattcgcctaaga
gagcgaggcaatagagttcttattttttctcaaatggtgcggatgttagatatacttgca
gaatatttgaagtatcgtcagttcccctttcaaagattagatggatcaatcaaaggggag
ctgaggaaacaagctctagatcattttaatgctgaaggatcagaggatttctgctttttg
ctttccacaagagctggaggtttaggaattaacttagcctcagctgacactgttgttata
tttgattctgattggaatccacaaaatgatcttcaggcacaggctagagctcatcgaatt
gggcaaaagaaacaggtgaatatttatcgtctggttacaaagggatcagttgaagaggat
attcttgaaagggccaaaaagaagatggttttagatcatcttgtgattcaaagaatggac
acaactgggaagacagtactacacacaggttctgccccttcaagttctactcctttcaat
aaagaagagttatcagccattttaaagtttggtgctgaggaactttttaaggagcctgaa
ggagaagaacaagagccccaggaaatggatatagatgaaatcttgaagagggctgaaact
catgaaaacgaagcaggacctttaactgtaggagatgaattactttctcagttcaaggtt
gccaacttttcaaatatggatgaggatgatattgagttggagcctgaaagaaattcaaag
aactgggaagaaatcattcctgaagatcaaagacgacgattagaagaagaggaaagacaa
aaggaacttgaagaaatttatatgctccccagaatgagaaactgtgcaaaacagattagt
ttcaatggaagtgaagggaggcgcagtagaagtaggagatactctggatctgatagtgat
tcaatatcagaaagaaaaaggccaaagaaacgtggaagaccacgaactatccctcgggaa
aatattaaaggatttagtgatgcagaaattcggcggtttatcaagagttacaagaaattt
ggtggccctctggaaagattagatgcaattgctcgagatgctgaattagttgataagtca
gagacagacctcagacgactaggagaattggtacataatggttgcattaaagctttaaag
gacaactcttcaggaacagaacgaacaggtggtagacttggaaaagtaaagggcccaaca
ttccgaatatcaggtgtacaggtgaatgccaagctggtcatctcccatgaagaagaatta
ataccgctgcacaaatccattccttcagatccagaagaaagaaagcagtatatcatccca
tgccacacgaaggcagctcattttgatatagactggggcaaagaagatgattccaatttg
ttaattggtatctacgaatatggatatggaagctgggaaatgattaaaatggatcctgac
ctcagtctgacacacaagattcttccagatgatcctgataaaaaaccacaagcaaaacaa
ttacagacacgtgcggactacctcatcaaattacttagtagagatcttgcaaaaaaagaa
gctcagaggctttctggtgcaggaggttcaaaaaggcgaaaagcaagagctaagaagaat
aaagcaatgaagtctataaaagtgaaagaggaaataaagagtgattcttctcccttgccc
tcagagaagtctgatgaagatgatgataaggatgaaatcacttctgtgaaacatccaaac
aaaaaaattaaaacagaaagagacagtgaagaaaaaactgagccagatgtttgtataaag
aaggaaccagaagaaaagagggaagcaaaagaaaaggaaaataaaagagaacttaaaagg
gagataaaagaaaaagaggataagaaagatataaaggaaaaagattttaaagagaaaaga
gaaaacaaagtaaaagaagctatacagaaagaaaaagacataaaagaagaaaagctgagt
gaatccaagtctgaaagcaaggaaagacctaagaaatcttcagtgttggatgctccagtt
cacatcaccgcaagtggtgaaccagtgcccatagcggaagaatctgaagagctggatcag
aagacattcagtatttgtaaagagaggatgaggcctgtcaaagcagcattgaagcagctt
gataggcctgagagaggcctttcggaaagagaacaactggaacatactagacagtgcttg
ataaaaatcggagaccatatcacagaatgtctgaaagagtatacaaatcctgaacaaatc
aagcagtggagaaaaaacctgtggatttttgtatctaagtttactgagttcgatgcaaga
aaattacataaattatataagcatgctattaaaaaacggcaggaatcccagcaaaataat
gaccagaacagcagcttgaatacacaagtgattagaaatccagatgtggaaagattaaaa
gagaatacaaatcatgatgacagcagcagggacagttattcatctgacagacacttatct
cagtatcatgatcatcataaagaccgacatcagggagattcgtacaagaagagtgactct
aggaagagaccttactcttcttttagtaatggtaaagatcatcgtgattgggatcactac
aagcaagacagcagatattacaatgatagagagaaacacagaaaactcgatgatcacagg
agtagagaccacagatcaaatctggaaggaagtttaaaagacagaactcattctgatcat
cgttctcattcagatcatcggttacattcagaccatcgatcaagttctgaatatgcacac
cataaatcttccagggattataggtatcactcagattggcagatggaccatagagcttcc
agtagtggtcccagatctccactagaccagaggtctccttatggctccagatctccattt
gaacactcaattgaaaacaaaagtacacctgagcatacctggagtagtcggaaaacataa
DBGET
integrated database retrieval system
