Capra hircus (goat): 102188580
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Entry
102188580 CDS
T02910
Symbol
COL9A3
Name
(RefSeq) collagen alpha-3(IX) chain
KO
K08131
collagen type IX alpha
Organism
chx
Capra hircus (goat)
Pathway
chx04151
PI3K-Akt signaling pathway
chx04510
Focal adhesion
chx04512
ECM-receptor interaction
chx04820
Cytoskeleton in muscle cells
chx04974
Protein digestion and absorption
chx05165
Human papillomavirus infection
Brite
KEGG Orthology (KO) [BR:
chx00001
]
09130 Environmental Information Processing
09132 Signal transduction
04151 PI3K-Akt signaling pathway
102188580 (COL9A3)
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
102188580 (COL9A3)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
102188580 (COL9A3)
09142 Cell motility
04820 Cytoskeleton in muscle cells
102188580 (COL9A3)
09150 Organismal Systems
09154 Digestive system
04974 Protein digestion and absorption
102188580 (COL9A3)
09160 Human Diseases
09172 Infectious disease: viral
05165 Human papillomavirus infection
102188580 (COL9A3)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
chx00535
]
102188580 (COL9A3)
Proteoglycans [BR:
chx00535
]
Extracellular matrix (ECM) proteoglycans
Others
102188580 (COL9A3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Collagen
Motif
Other DBs
NCBI-GeneID:
102188580
NCBI-ProteinID:
XP_005701447
EnsemblRapid:
ENSCHIG00000022644
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Position
13:complement(53868649..53889564)
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AA seq
684 aa
AA seq
DB search
MAGAPTLALLLLGQLLAATVTLTEAQKVGPRGPPGPQGPPGKPGKDGIDGEVGPPGLPGP
VGPKGAPGKPGKPGEAGLPGLPGVDGLTGQDGPPGPKGAPGERGSLGPPGPPGLGGKGLP
GPPGEAGVSGLPGGIGLRGPPGPSGLPGLPGPPGPPGPPGHPGVLPEGATDLQCPAICPP
GPPGPPGMPGFKGPTGYKGEPGEVGKDGEKGDPGPPGPPGIPGTVGLQGPRGLRGLPGPL
GPPGDRGPIGFRGPPGIPGAPGKAGDRGERGPEGFRGPKGDLGRPGPKGIPGMSGPSGEP
GMPGKDGRDGVPGLDGEKGEAGRHGAPGEKGPNGLPGLPGRAGSKGEKGELGRPGELGEA
GPSGEPGVPGDVGMPGERGEAGHRGSAGALGPQGPPGAPGIRGFQGRKGSIGDPGLPGPQ
GLRGGVGDRGPGGAAGPKGDQGIAGADGLPGDKGELGPSGPVGPKGESGSRGELGPKGIQ
GPNGTSGVDGVPGPPGPVGLQGVRGVPGITGKPGVPGKEASEQHIRELCGGLVSEQIAQL
AAHLRKPLAPGSIGRPGPAGPPGPPGPPGSIGHPGARGPPGYRGPTGELGDPGPRGNQGD
RGDKGSAGEGLDGPDGDQGLQGPQGVPGISKDGRDGAHGEPGLPGDPGLPGAVGAQGPPG
ICDTSACQGAVMAAVGEKSGPRSS
NT seq
2055 nt
NT seq
+upstream
nt +downstream
nt
atggctggagcccccaccctggccctgctgctgctggggcagctgctggccgccaccgta
accttgaccgaggcacagaaagtgggacctcgaggcccccctggtccccaagggccaccc
gggaagccaggcaaggatggcattgatggagaagttggtcctcctggtcttcctgggccc
gtgggaccaaaaggggccccagggaagccagggaaaccaggagaggccgggctgcctgga
ctgcctggcgtggatggtctgaccgggcaggatggacctcctggacccaagggcgctcct
ggagaacggggaagtctgggacccccagggccacctgggctggggggcaaaggcctccct
ggacctcctggagaggcaggggtgagcggcctcccaggtggaattggcctccggggcccc
ccgggaccctcaggactcccaggcctccctggccccccaggacctcctggcccccctggt
cacccaggggtgcttcccgaaggtgctactgatcttcagtgcccggccatctgcccacca
ggccccccagggcccccaggaatgccagggttcaagggacccactggctacaaaggggag
cctggagaagtcggcaaggatggcgaaaagggtgaccccggcccccctggaccccctggt
atcccgggcaccgtggggttgcagggtccacggggcctacgaggacttccagggccactt
ggaccccccggggaccggggtcccattgggttccgagggccccccgggatcccaggagcc
cctgggaaagcgggcgacagaggagagaggggcccagaggggttccgcggccccaagggc
gaccttggcaggcctggtcctaaaggcatccccggcatgtctgggcccagtggagagccg
ggcatgccaggcaaggacggccgggatggtgtgccaggactcgatggcgagaagggagaa
gctggtcgccacggcgccccgggagagaaggggcccaacgggctaccgggtctccccgga
cgagcagggtccaagggtgagaaaggagaactgggcagacctggagagctgggcgaggcc
ggcccctcgggagagcctggtgtccctggagatgttggcatgcccggcgagcgtggagag
gctggacacaggggctcagcgggggcactgggcccgcaaggcccccccggggcccctggc
atccgtggcttccagggccggaagggcagcataggagaccccggcctgccgggcccccaa
ggcctccgaggtggcgtgggcgaccggggcccgggaggagcagccggccccaagggcgac
cagggcatcgcgggtgctgacggccttcctggggataaaggagaactgggtcccagcggc
cctgttggccccaaaggagagtccggcagtcgcggggagctgggccctaagggcatccag
ggccccaacggcaccagcggcgtagatggcgtccctggcccccctggccccgtgggcctc
cagggcgtgcgaggcgtgcccggcatcactggaaaacctggggtcccggggaaagaagcc
agcgagcaacacatcagggagctgtgcggggggctggtcagtgagcaaattgcgcagctg
gccgcgcacctgaggaagcccctagcaccaggctccatcgggcgcccgggtcctgctggc
cccccgggccccccaggccccccaggctccattggtcaccctggggctcgagggccccct
ggataccgaggtcccacaggagagcttggagaccctggacccagaggaaaccagggcgac
agaggagacaaaggctcagctggcgagggcctggatgggcctgacggagaccaagggctg
caaggaccgcaaggcgtgcccggcatcagcaaagacggccgagatggggctcacggtgag
cctgggctccccggcgatcctggccttcctggtgccgtcggcgctcaggggcctcctggc
atctgcgacacctccgcctgccaaggagccgtgatggcagctgttggggagaagtcaggt
ccccggagctcctaa
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