KEGG   Capra hircus (goat): 102188580
Entry
102188580         CDS       T02910                                 
Symbol
COL9A3
Name
(RefSeq) collagen alpha-3(IX) chain
  KO
K08131  collagen type IX alpha
Organism
chx  Capra hircus (goat)
Pathway
chx04151  PI3K-Akt signaling pathway
chx04510  Focal adhesion
chx04512  ECM-receptor interaction
chx04820  Cytoskeleton in muscle cells
chx04974  Protein digestion and absorption
chx05165  Human papillomavirus infection
Brite
KEGG Orthology (KO) [BR:chx00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   04151 PI3K-Akt signaling pathway
    102188580 (COL9A3)
  09133 Signaling molecules and interaction
   04512 ECM-receptor interaction
    102188580 (COL9A3)
 09140 Cellular Processes
  09144 Cellular community - eukaryotes
   04510 Focal adhesion
    102188580 (COL9A3)
  09142 Cell motility
   04820 Cytoskeleton in muscle cells
    102188580 (COL9A3)
 09150 Organismal Systems
  09154 Digestive system
   04974 Protein digestion and absorption
    102188580 (COL9A3)
 09160 Human Diseases
  09172 Infectious disease: viral
   05165 Human papillomavirus infection
    102188580 (COL9A3)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   00535 Proteoglycans [BR:chx00535]
    102188580 (COL9A3)
Proteoglycans [BR:chx00535]
 Extracellular matrix (ECM) proteoglycans
  Others
   102188580 (COL9A3)
SSDB
Motif
Pfam: Collagen
Other DBs
NCBI-GeneID: 102188580
NCBI-ProteinID: XP_005701447
EnsemblRapid: ENSCHIG00000022644
LinkDB
Position
13:complement(53868649..53889564)
AA seq 684 aa
MAGAPTLALLLLGQLLAATVTLTEAQKVGPRGPPGPQGPPGKPGKDGIDGEVGPPGLPGP
VGPKGAPGKPGKPGEAGLPGLPGVDGLTGQDGPPGPKGAPGERGSLGPPGPPGLGGKGLP
GPPGEAGVSGLPGGIGLRGPPGPSGLPGLPGPPGPPGPPGHPGVLPEGATDLQCPAICPP
GPPGPPGMPGFKGPTGYKGEPGEVGKDGEKGDPGPPGPPGIPGTVGLQGPRGLRGLPGPL
GPPGDRGPIGFRGPPGIPGAPGKAGDRGERGPEGFRGPKGDLGRPGPKGIPGMSGPSGEP
GMPGKDGRDGVPGLDGEKGEAGRHGAPGEKGPNGLPGLPGRAGSKGEKGELGRPGELGEA
GPSGEPGVPGDVGMPGERGEAGHRGSAGALGPQGPPGAPGIRGFQGRKGSIGDPGLPGPQ
GLRGGVGDRGPGGAAGPKGDQGIAGADGLPGDKGELGPSGPVGPKGESGSRGELGPKGIQ
GPNGTSGVDGVPGPPGPVGLQGVRGVPGITGKPGVPGKEASEQHIRELCGGLVSEQIAQL
AAHLRKPLAPGSIGRPGPAGPPGPPGPPGSIGHPGARGPPGYRGPTGELGDPGPRGNQGD
RGDKGSAGEGLDGPDGDQGLQGPQGVPGISKDGRDGAHGEPGLPGDPGLPGAVGAQGPPG
ICDTSACQGAVMAAVGEKSGPRSS
NT seq 2055 nt   +upstreamnt  +downstreamnt
atggctggagcccccaccctggccctgctgctgctggggcagctgctggccgccaccgta
accttgaccgaggcacagaaagtgggacctcgaggcccccctggtccccaagggccaccc
gggaagccaggcaaggatggcattgatggagaagttggtcctcctggtcttcctgggccc
gtgggaccaaaaggggccccagggaagccagggaaaccaggagaggccgggctgcctgga
ctgcctggcgtggatggtctgaccgggcaggatggacctcctggacccaagggcgctcct
ggagaacggggaagtctgggacccccagggccacctgggctggggggcaaaggcctccct
ggacctcctggagaggcaggggtgagcggcctcccaggtggaattggcctccggggcccc
ccgggaccctcaggactcccaggcctccctggccccccaggacctcctggcccccctggt
cacccaggggtgcttcccgaaggtgctactgatcttcagtgcccggccatctgcccacca
ggccccccagggcccccaggaatgccagggttcaagggacccactggctacaaaggggag
cctggagaagtcggcaaggatggcgaaaagggtgaccccggcccccctggaccccctggt
atcccgggcaccgtggggttgcagggtccacggggcctacgaggacttccagggccactt
ggaccccccggggaccggggtcccattgggttccgagggccccccgggatcccaggagcc
cctgggaaagcgggcgacagaggagagaggggcccagaggggttccgcggccccaagggc
gaccttggcaggcctggtcctaaaggcatccccggcatgtctgggcccagtggagagccg
ggcatgccaggcaaggacggccgggatggtgtgccaggactcgatggcgagaagggagaa
gctggtcgccacggcgccccgggagagaaggggcccaacgggctaccgggtctccccgga
cgagcagggtccaagggtgagaaaggagaactgggcagacctggagagctgggcgaggcc
ggcccctcgggagagcctggtgtccctggagatgttggcatgcccggcgagcgtggagag
gctggacacaggggctcagcgggggcactgggcccgcaaggcccccccggggcccctggc
atccgtggcttccagggccggaagggcagcataggagaccccggcctgccgggcccccaa
ggcctccgaggtggcgtgggcgaccggggcccgggaggagcagccggccccaagggcgac
cagggcatcgcgggtgctgacggccttcctggggataaaggagaactgggtcccagcggc
cctgttggccccaaaggagagtccggcagtcgcggggagctgggccctaagggcatccag
ggccccaacggcaccagcggcgtagatggcgtccctggcccccctggccccgtgggcctc
cagggcgtgcgaggcgtgcccggcatcactggaaaacctggggtcccggggaaagaagcc
agcgagcaacacatcagggagctgtgcggggggctggtcagtgagcaaattgcgcagctg
gccgcgcacctgaggaagcccctagcaccaggctccatcgggcgcccgggtcctgctggc
cccccgggccccccaggccccccaggctccattggtcaccctggggctcgagggccccct
ggataccgaggtcccacaggagagcttggagaccctggacccagaggaaaccagggcgac
agaggagacaaaggctcagctggcgagggcctggatgggcctgacggagaccaagggctg
caaggaccgcaaggcgtgcccggcatcagcaaagacggccgagatggggctcacggtgag
cctgggctccccggcgatcctggccttcctggtgccgtcggcgctcaggggcctcctggc
atctgcgacacctccgcctgccaaggagccgtgatggcagctgttggggagaagtcaggt
ccccggagctcctaa

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