Capra hircus (goat): 108635303
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Entry
108635303 CDS
T02910
Name
(RefSeq) collagen alpha-1(I) chain-like
Organism
chx
Capra hircus (goat)
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
T6SS_Vgr
Motif
Other DBs
NCBI-GeneID:
108635303
NCBI-ProteinID:
XP_017901000
LinkDB
All DBs
Position
Unknown
AA seq
1281 aa
AA seq
DB search
VPGKGAGEGHGAPRPDADHRPPRPRPPRARARPRRCRPVTHWGPPPRAGRPPPGGPRRAP
DSRPHPSPGTGQSPFPTAAPSHAVPYGPGSAGPPPASLPQPPGVGGAPLPAPALPGTLPP
NHPPPRAEGRGQGLRREAWRPAGGGGSRGRENPDGDTRAAGRRGGWGGAGQGPEARRGAG
GARRPRDGPRAAGRPTTTGRGRPAQGRRRGRRRGGASGPATGKPPPVAPHSRETRPEDPR
RAGSAGRGEAVVAGATGGGVGGGARGSPPPEPSGPPPGTWRGGRAGRGTHAGGGDAAPPP
GARRGGGATPRPRTRLPSPLPFPIPRRTGVAAAEGEAREPGGAALGTRPPRVNDPSAGSP
TETLLRLLLPLDSQVRPSSQRSARAVGRPRRGRSEGLTKPSNRINQVGGSERDDEEPGVP
VGGGVGRGRPPRGEGAERGGGGREGRSPGRETRPPRSRPRRGRPTARPTLGVREGRGASP
PPRGRHEGGAGWCGGEEGGGPPCSLPPPSRPARATPGTADARPRRPSVHPPQSGAGDAGR
RGRGDRPAAGQDRGPVPRSGERTGAGAPPRPARDGGGGGGGDTGDGSGPRRAREARHTGA
RGPGEQQTARGPRRTDGRRGAPTGCGHAGPTPRNRRRGWGGRAPPRGERPKASRGRGRES
AAGAHRGISPPQALPAQGRSRGATRDEGLAPPPSRGSRPPPPPPPEPQPARGEHSPAAHR
RPPPHGPHARGAPPPRPPRSGLSEGTAPLRPGTPPARQGPGDDTHVKARRGRLGPGQGTG
TRAVARAGRGEARRGRRRRGGAGEHARRGPRDRDAGAVRGPEEKDRATRPGPQEHQRGIP
PPPAREGGPATPGAPAGPGHPRSVARDPAPPPGSVFRLSLNPEARPPGDDALERGGPDRD
RTPPPAAAQGARAGLTPRGPAARTRPPTCRTPGGAQRDPPPTRRGEARAARRRSHRGRAV
PPPDRLAFGLTEALHEPPGLSRAGGVCGTGKRTTTQERVRGQGQSRARVPPPARPHPPRP
PRRGERARLSLPPRPPRKTATLGTHTPPWRGPEGDAGLRETTPPLGLRHLRDDLERSRGT
TEGHTRHARTPAWGAQRGSGGTALPATGRAARRAHAEEAKREQSAVSEDQRPPLTPRGRG
RETEDQGQRPHPTPAFLTLPDGQRGGKTSEGPRGQTEKSGHVHRERPSLVRHGFGSAREN
TTTPHRSVEPRWSRGRHGEDSHQRGPLSASPAASIPPPPRLRRERPTTPRGEHLTGGAEP
TGRGSSQPPPGAHSGGEGRRG
NT seq
3846 nt
NT seq
+upstream
nt +downstream
nt
gtacctgggaagggggcgggcgaggggcacggcgcgccccgccccgacgcggaccaccga
ccgccgcgtccccgcccgccgcgcgcgcgcgcgcggcctcggcgctgccggcccgtgaca
cactgggggcccccgccgcgcgccggtcgaccgccgcccggagggccccgccgggcgccg
gacagccggccccacccgtcccccgggacggggcagagccctttccccaccgccgcgccc
tcacacgccgtcccgtacgggcccggctccgccggacctcccccggcctctctcccccaa
ccaccgggggtggggggggcccccctgcccgcgcccgcgctcccgggcacccttcccccc
aaccacccaccaccgagggcagagggcagggggcaggggctccgacgggaagcttggcgc
ccagcgggcgggggggggtcgagagggcgggagaacccggacggagacacacgagccgcc
gggaggcgtggggggtggggcggggcgggacagggccccgaggcccggaggggcgcggga
ggcgcccggcgaccgcgcgacgggcccagagcggcgggacgaccgacgacgaccggccga
ggcagaccggcccagggccggcggcgcgggaggcgacggggcggggcgagcggccccgcg
acggggaagccgccgcccgtcgcgccgcacagccgcgagacgcgaccggaggacccgcgc
cgcgcggggtccgcgggccggggagaggcggtcgtggccggcgccacgggcggtggggtg
gggggaggcgcacggggcagccccccccccgaaccctcgggcccacctccagggacgtgg
cggggaggccgggcggggagagggacacacgccggaggcggcgacgccgcgccgccgccg
ggcgcgaggcggggcggcggggcgaccccccgcccccggacgcgtctcccttcccccctg
cccttccccatcccgcgccgcacgggggtggcggcggcggaaggcgaggctcgcgagccg
ggcggcgccgctctcggcacgcgacctccgcgcgttaatgatccttccgcaggttcacct
acggaaaccttgttacgacttttacttcctctagatagtcaagttcgaccgtcttctcag
cgctccgccagggccgtgggccgaccccggcggggccgatccgagggcctcactaaacca
tccaatcggatcaaccaggtagggggaagcgagcgcgacgacgaggagccgggcgtgccg
gtgggggggggggtggggagaggcagacccccgcgaggcgagggagccgagagaggaggg
gggggccgggaagggcgctcgccgggccgggagacccgaccgccccggtcccgcccgcgg
cgaggacgcccgaccgcgcgacccaccctcggggtccgcgagggtcgcggcgcgtcgccg
ccaccgcgcgggaggcacgaggggggggcggggtggtgcggcggggaggagggcggcggg
ccgccctgctctctccctcctccatcccgcccggcccgggccacaccggggacggccgac
gcgcgccctcggcgtccgtccgtccacccgccccagagcggggcgggggacgccgggcgg
cgaggacgcggcgaccggcccgcggcggggcaagaccggggacccgtcccgcgctcgggc
gagcgcaccggggcgggggcgccccctcgtccggcacgcgacggcggcggcggcggcggc
ggcgacacgggcgacggatcggggccgcggcgggcccgggaagcgaggcacaccggggca
cgcggccccggggagcagcagacggcgaggggaccgaggcggacggacgggcggagaggg
gcaccgacgggatgcggccacgcggggccgacaccgcgcaaccggcggcgggggtggggt
ggccgcgcgccaccgcgaggggaacggcccaaagcgagccgggggaggggacgcgagtcg
gccgccggggcccaccgcgggatctcaccgccacaggccctcccggcacaggggcggtcc
cgcggcgccacccgcgacgaaggactggcgcccccaccctcgcggggctcgcggccaccg
ccaccgccacccccggagccgcagccggcccggggagaacactctcccgccgcacaccgg
cggccccccccccacggccctcacgcgcgcggggctcccccgccccgcccccctcgctca
gggctttccgagggcactgcaccgctccgcccggggacgccaccggcccggcaggggccg
ggggacgacacccacgtgaaggcgaggcgaggccggctcgggcccgggcaggggacggga
acgcgggcggtcgcacgcgcgggacgaggagaggcgaggcgaggccggcggcggcgggga
ggggccggcgagcacgcacggcgggggccgcgggacagggacgcgggcgccgtccgggga
ccggaggaaaaagaccgggccacgcggccgggcccccaggaacaccagcgcgggatccca
ccgccacccgcacgcgagggcggtcccgcgacgcccggggcgccggccggccccggccat
ccccggagcgtggcccgcgacccggccccgccgccaggatccgtcttccgtctgagtctg
aaccccgaggcgcgaccacccggggacgacgctctcgagcgaggcggcccggaccgtgac
cgcacgccgccaccggctgcggctcagggggcgagggcggggctcaccccacgggggccg
gccgcacgcacacggccccccacctgccggacgcccggcggggcccagcgggaccctccc
ccgactcggaggggggaggcgcgggccgcgagaaggcgttctcaccgagggcgcgccgtc
cctcccccggaccgtctcgccttcgggctcacggaggcgctccacgagccgcccggcctc
agccgggcgggaggggtctgcggtacagggaagcggaccaccacgcaggagcgtgtgcgc
ggtcagggccagagcagagcccgcgtcccgccccctgcaaggcctcatccgccgaggcct
ccgcgacgaggggaacgggcacgcctctcccttccgcctcgacccccccgaaagacagcc
acgctcgggacacacacgccaccgtggcggggacccgagggggacgccgggttgagggaa
acgacaccaccgctcggcctcaggcacctgagggacgacctggagcgctccaggggcacc
accgagggtcacacgaggcacgctcgcacacccgcgtggggcgcgcagcgcggcagcggc
ggcacagccctccccgccacagggagggccgctcgccgggcacacgccgaggaggcgaag
cgggagcaatctgccgtgtcagaagaccaacggcccccactgacgccccgaggcagggga
cgggagaccgaagatcagggccagaggccacacccaacccctgccttcctcaccctccct
gacgggcagcggggggggaagacaagcgaggggccccgcggacagaccgagaagagcgga
cacgttcaccgggaacgcccgtccctcgtccggcacggtttcggctcggcccgggagaac
acgaccacaccacatcgatccgtggagccgaggtggagcagggggaggcacggcgaggac
agtcaccagaggggcccgctttcagcctcgccggcagcctccatcccccccccacctcgc
ctcaggcgagagcggccaacgaccccgagaggagaacacctgacaggtggcgcggagccc
acagggcgggggtcgtcccagccgccaccaggtgcccacagcgggggtgaggggcgccga
gggtag
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