Croceimicrobium hydrocarbonivorans: H4K34_14605
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Entry
H4K34_14605 CDS
T07152
Symbol
xerD
Name
(GenBank) site-specific tyrosine recombinase XerD
KO
K04763
integrase/recombinase XerD
Organism
chyd
Croceimicrobium hydrocarbonivorans
Brite
KEGG Orthology (KO) [BR:
chyd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
chyd03036
]
H4K34_14605 (xerD)
Chromosome and associated proteins [BR:
chyd03036
]
Prokaryotic type
Chromosome partitioning proteins
Other chromosome partitioning proteins
H4K34_14605 (xerD)
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
Phage_integrase
Phage_int_SAM_1
Phage_int_SAM_5
Phage_int_SAM_4
Motif
Other DBs
NCBI-ProteinID:
QNR23596
UniProt:
A0A7H0VCZ8
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All DBs
Position
complement(3259519..3260421)
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AA seq
300 aa
AA seq
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MQWKGAIREFKNYLQLEKGLADNSVKAYLRDLNKIAHYFENEELGPLQLNLFRLEKCLRD
LQNHGLSTRSQARLISSLRAFYKYLILEDYIDQNPAELLEGPKLDQKLPEYLEEEEVSAM
IDSIDRSKPEGMRNVAIFETLYACGLRVSELVGLRLSDLFFKEDLIRVVGKGNKERLVPI
NSLAQKMIELYRQEVRVHLPIKKGSEDILFLNRRGSALSRAMIFNLVKDAASAAGIRKTI
SPHTFRHSFATHLVKHGADLRAVQEMLGHESITTTEIYTHLSQQQLRETILKFHPRSKDA
NT seq
903 nt
NT seq
+upstream
nt +downstream
nt
atgcagtggaaaggcgccattcgagaattcaaaaactatctgcaactggagaagggtctg
gccgataattcggtgaaagcctatctccgtgacttgaataaaattgcccactatttcgag
aatgaagaactgggacccttgcaattgaaccttttccgtttggagaaatgcttgcgagat
ttgcaaaatcatggattgagcacccgcagtcaggcccgcttaatttcctccctccgtgct
ttttataagtacctaattttagaagactatatcgatcaaaatcctgctgaactactggaa
ggacctaaattggatcaaaagcttccagagtatttagaggaagaagaagtatcggctatg
atcgatagtattgatcgctccaagcccgaaggcatgcgtaatgtggccattttcgaaact
ctttatgcctgtggtttgcgggtttccgaattagtgggtctgcgcctttccgatctcttt
tttaaggaagatcttattcgggtagtgggcaaaggcaataaggaaagattggttcccatc
aatagcctggctcaaaagatgattgagctgtaccgacaggaagtgcgggtgcatctgccc
attaaaaaaggctccgaagacattctcttcctcaatcgcagaggcagtgccttaagtcgg
gccatgatattcaatttagtgaaagatgctgcctccgcagcgggcatccgcaaaaccatt
tcgccccatacctttcgtcatagcttcgctacccacctcgtaaaacatggcgccgattta
cgcgctgtccaagaaatgctggggcatgaaagcatcaccaccaccgagatttatacccat
ctcagtcagcagcagttaagggaaactattctgaagtttcatcctcggtctaaggatgct
taa
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