Clostridium isatidis: BEN51_10075
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Entry
BEN51_10075 CDS
T05663
Name
(GenBank) DNA polymerase III subunit alpha
KO
K03763
DNA polymerase III subunit alpha, Gram-positive type [EC:
2.7.7.7
]
Organism
cia
Clostridium isatidis
Pathway
cia03030
DNA replication
cia03430
Mismatch repair
cia03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
cia00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
BEN51_10075
03430 Mismatch repair
BEN51_10075
03440 Homologous recombination
BEN51_10075
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
cia03032
]
BEN51_10075
03400 DNA repair and recombination proteins [BR:
cia03400
]
BEN51_10075
Enzymes [BR:
cia01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
BEN51_10075
DNA replication proteins [BR:
cia03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
BEN51_10075
DNA repair and recombination proteins [BR:
cia03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
BEN51_10075
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
RNase_T
PHP
DNA_pol3_finger
HHH_6
DNA_pol3_a_NI
tRNA_anti-codon
Rv2179c-like
RNase_H_2
HHH_3
DEDDh_C
tRNA_anti_2
Rubredoxin
YhfH
Motif
Other DBs
NCBI-ProteinID:
ASW43818
UniProt:
A0A343JE60
LinkDB
All DBs
Position
complement(2150755..2155107)
Genome browser
AA seq
1450 aa
AA seq
DB search
MKKISEIFSDYALGGNINTAVIEGVTLRKKTKTLEMKLSCDKYIEIGEIESFNNFIKERF
ALNDSKIIINYTEASFERSIEDRVKEVLDFLSIKHPFLKAAINNCKLEINDICLNFSFKM
VISEMLRELKYDKKIQDSLKALYGKTYKINFIDDVSEEELIKLKENNLIKEKVIIQKDVQ
AKQNNNNNNATPVKLVPEINQEAKAENDSKNKNSLLILGRNGNIKDPVIKITDITPNEGR
VVIQGEISNIDAKELRSGKLLVSFDLYDGSSSITCKAFVKPGEGDEVFSRLKKTKAVKLL
GNAGYSSFSGEVEIIANTILEAEAIKKATRMDTAEVKRVELHMHTQMSQMDGVTSATDLI
KRAMSWGMKSIAITDHGVVQSFPEAHKLLGRNNPDMKVIYGVEAYLAPDKKPSVTNSMGQ
SIDTTYCVLDLETTGFSAVTEKITEIGIMKVKDGKVIDKFGCFVNPEKPIPAKVVEVTNI
TDDMVKDAETIDKIFPKILDFIEGSVLVAHNAEFDVGFLKQNAKVLGYEFDYTFIDTLAL
AKELFPEYKTYKLGRIAKHLGIKVEVAHRALDDVDTTVKVFNVMIDMLKERGVKTLDDID
KYASDEIAKKEEFKKLKTYHAIILAKNYVGLKNLYKLVSYSHLDYFYKKPRILKSMFKKY
SEGLIIGSACSEGELYQAILLGRSDEEIEAIAQEYDYLEIQPLDNNEYLIRTEQVPDREY
LKEINRKIVDLGEKLNKPVVATGDVHFLDPEDEIYRRIIEAGQGFKDADNQAPLYLRTTD
EMLKEFSYLGKDKAYEVVVENTNKIADMCEQISPISPEKATPYIDGCEQTIKDIAYGKAH
ELYGDPLPEIVQARLDKELDSIIKNGFSVMYIIAQKLVWKSNEDGYLVGSRGSVGSSIVA
YMTGITEVNALPPHYRCPKCKYSDFTDYGCNNGIDLPDKDCPVCGEKLAKDGMDIPFETF
LGFNGDKEPDIDLNFSGEYQAKAHKYTEVIFGKGTTFKAGTVGTVAEKTAFGYVKKYFEE
RNVNVNKAEMLRLSKGCTGIKRTTGQHPGGIIVVPKGREIFEFCPVQHPADDPNSDIITT
HFDYHSIDQNLLKLDILGHDDPTVIRMLQDLTGVDPKTIPLDDKETMSIFSSTEALGVTP
EQINSQVGTFGVPEFGTKFVRGMLVDTKPKTFSDLLCISGLSHGTDVWLGNAKDLIDTGI
VTSISEAVCTRDDIMVYLIKKGLPPNTAFKIMELVRKGKALKDPKWPEYEALMRENDVPE
WYIDSCRKIKYMFPKAHAAAYVMMAFRIAWFKVHIPIAYYCAYFTIRAKAFDAEYMIFGK
EKVKAKMKEIEDLGNDAAPKDKDMYDDLEIVLEMYERGLSFLPIDLYKSHATKFKIEDGA
LRPPLNSIAGMGNVAAEAIYSAVNSGIPISSIEDLKKRDRVGNSAVELLRKFGCLEGLPE
RDQLSFFDVI
NT seq
4353 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaaaataagtgaaatttttagtgactatgccttgggggggaatataaacacagca
gtaattgagggagttactttaagaaaaaagactaaaactcttgaaatgaaattaagctgt
gataaatatattgagattggagaaatagaatcttttaacaatttcattaaagaaagattt
gccctaaatgattcaaaaattataataaattatactgaagcttcctttgaaagatcaata
gaagatagagttaaggaagttctagactttttatcaattaaacaccctttcttaaaagct
gcaataaataattgtaaattagaaattaatgatatttgtcttaattttagttttaaaatg
gttatttctgaaatgcttagggaattaaaatatgataaaaaaattcaggattcattaaaa
gctttatacggaaaaacatataaaattaattttattgatgacgtaagcgaagaagagcta
attaagttaaaggaaaacaacttaattaaagaaaaagtcattattcaaaaggatgttcag
gcaaaacaaaataataacaataataatgcaacgccagttaagcttgttccagaaattaat
caagaagcaaaagcagaaaatgacagtaaaaataagaattcactattgatactaggtaga
aatggaaatataaaggatcctgtaattaagattactgatataacaccaaatgaaggaaga
gttgttatacaaggtgaaatatcgaatatagatgcaaaggaattaagaagtggaaaatta
ttagtttcttttgatttatatgatggatcaagttcaatcacctgtaaggcttttgtaaaa
ccaggggaaggtgacgaggtattttcaagattgaaaaagacaaaggcagtaaagcttctt
ggtaatgcaggctatagcagtttttctggagaagttgaaataattgctaatactatacta
gaggcagaagccattaaaaaggccactaggatggatactgcagaagttaagagagtagag
cttcatatgcatactcaaatgagtcaaatggatggagtaactagtgctactgatttaatt
aagagagccatgagctgggggatgaagtctattgcaataacagaccatggagttgttcaa
tcctttccagaagctcataaacttttaggaagaaataatccagatatgaaggttatttat
ggagttgaagcttatttagcaccagataaaaagccatctgtaacgaattctatgggacag
tctattgatacaacctattgtgtactagatttagaaacaacaggtttttctgctgttacg
gaaaaaataactgaaataggtattatgaaggttaaagatggtaaggtaatagataaattt
ggctgctttgtaaaccctgaaaagcctattccagcaaaggttgttgaagtaactaacata
actgatgatatggtaaaagatgcagagactattgataaaatcttccctaaaatattagat
tttatcgaaggaagtgttttagttgctcataatgctgaatttgatgttggtttcttaaag
cagaatgcaaaagttttaggttatgaatttgattataccttcatagatactttagcctta
gcaaaggaattatttccagaatataagacctataaactaggaagaatagctaagcactta
ggtattaaggtagaagttgcccatagagccttagatgacgttgacacaactgttaaggtg
tttaatgtgatgatagacatgttaaaggaaagaggagtaaaaactcttgatgacatagat
aaatatgcctcagatgaaatagctaagaaggaagaatttaaaaagcttaaaacttatcat
gcaataatacttgcaaagaattatgtaggtttaaagaatttatataaattggtatcttat
tcacatttagattatttctataaaaaacctcgtattttaaagagtatgttcaaaaagtac
tcagaaggcttaatcataggtagtgcctgcagtgaaggagagctttatcaagcaatatta
cttggaaggtctgatgaagaaattgaagcaatagcacaggaatatgattatttagaaatc
cagcctttagataataacgaatatttaattaggactgagcaggttcctgacagggagtat
ttaaaagaaattaatagaaagattgttgatttaggagaaaagttaaataaacctgtagta
gcaactggggatgttcacttcttagatccagaagatgaaatatatagacgtataattgaa
gcagggcaaggctttaaggatgctgataatcaagctccactttatttaagaactacagat
gaaatgcttaaagagttttcgtatctaggaaaagataaggcttatgaagtagtagtagaa
aatacaaataaaattgcagatatgtgtgagcagattagtccaatatctccagaaaaagct
actccatatatagatggatgtgagcagaccattaaagatattgcctatggaaaggctcat
gaattatacggcgatccattaccagaaatagttcaagcaagattagataaagagctagat
tctattataaaaaatggtttctcggtgatgtatataattgcccaaaaactggtgtggaag
tcaaatgaagatggatacttggtaggttcaagaggttccgttggttcatctattgttgct
tatatgacagggataacagaggttaatgctttgcctcctcactatagatgtcctaaatgt
aagtattcagattttacagattatggctgtaataatggaattgacttacctgataaagat
tgtccagtatgcggtgaaaaacttgcaaaagatggtatggatataccttttgaaaccttt
ttaggttttaatggagataaggaaccagatatagacctaaacttttcaggagaatatcaa
gcaaaagcacataaatatactgaagttatctttggtaaaggaacaacctttaaggctgga
acagttggtacagtagcagaaaaaacagcctttggatatgttaagaaatattttgaagaa
agaaatgtaaatgttaataaggcagaaatgttgagattatcaaaaggttgtacaggaata
aagagaacaactggacagcatccaggtggaattatagtagttccaaagggaagagaaata
tttgagttttgtcccgttcaacatccagctgatgaccctaattcagatattattacaacc
cactttgattatcactcaatagatcaaaacttactaaagcttgatatacttggtcacgac
gatcctacagtaataagaatgcttcaggatttaactggagtagatcctaaaactatacct
ttagatgataaggaaactatgtctatattttcatctacagaagctttaggagtaacacca
gagcagataaattctcaggtaggaacctttggagttcctgagtttggtactaagttcgtt
aggggaatgcttgttgatacaaagccaaagaccttctcagatctcttatgtatatcaggg
ctttcacatggtactgatgtttggttaggaaatgctaaagacctaattgatacaggaata
gtaacaagtataagtgaagccgtatgtacaagagatgatattatggtttacttgattaaa
aaaggtcttccgccaaatactgcatttaaaattatggaacttgttcgtaaagggaaggct
ttaaaagatccaaagtggcctgaatatgaagcactaatgagggaaaatgatgtgcctgaa
tggtatatagactcttgtagaaagataaaatacatgttccctaaagcccatgcagctgct
tatgtaatgatggcctttagaatagcttggtttaaggttcatatacctattgcttattat
tgtgcatatttcactataagggcaaaggcctttgatgcagaatatatgattttcggaaaa
gaaaaagtaaaggcaaagatgaaggagattgaagatttaggtaatgatgcagctcctaaa
gataaggatatgtatgatgatttagaaatagttttagaaatgtatgaaaggggcttaagc
ttcctgccaattgatttatataaatctcacgctacaaagttcaaaattgaagatggggct
ttaagaccacctcttaatagtatagcaggtatgggaaatgtagctgctgaagctatatat
agtgctgttaatagtggaattccaataagttcaatagaagacttaaagaaaagagatagg
gttggtaattctgcagtagagttattaagaaaatttggttgtttagaaggtcttccagaa
agagatcaattaagtttttttgatgtaatataa
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