Citrobacter sp. TSA-1: HF677_018060
Help
Entry
HF677_018060 CDS
T09275
Symbol
ddlA
Name
(GenBank) D-alanine--D-alanine ligase
KO
K01921
D-alanine-D-alanine ligase [EC:
6.3.2.4
]
Organism
cib
Citrobacter sp. TSA-1
Pathway
cib00470
D-Amino acid metabolism
cib00550
Peptidoglycan biosynthesis
cib01100
Metabolic pathways
cib01502
Vancomycin resistance
Brite
KEGG Orthology (KO) [BR:
cib00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
HF677_018060 (ddlA)
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
HF677_018060 (ddlA)
09160 Human Diseases
09175 Drug resistance: antimicrobial
01502 Vancomycin resistance
HF677_018060 (ddlA)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
cib01011
]
HF677_018060 (ddlA)
Enzymes [BR:
cib01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.4 D-alanine---D-alanine ligase
HF677_018060 (ddlA)
Peptidoglycan biosynthesis and degradation proteins [BR:
cib01011
]
Precursor biosynthesis
Amino acid ligase
HF677_018060 (ddlA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Dala_Dala_lig_C
Dala_Dala_lig_N
ATP-grasp
CPSase_L_D2
ATP-grasp_3
ATPgrasp_ST
ATP-grasp_4
RimK
GARS_A
Motif
Other DBs
NCBI-ProteinID:
QKE21474
LinkDB
All DBs
Position
3761233..3762327
Genome browser
AA seq
364 aa
AA seq
DB search
MAKLRVGIVFGGKSAEHEVSLQSAKNIVDAIDKTRFDVVLLGIDKEGQWHISDASNYLLN
SDDPAHIALRPSATSLAQVPGKQEHQLIDAQNGQPLPTVDVIFPIVHGTLGEDGSLQGML
RVANLPFVGSDVLGSAACMDKDVTKRLLRDAGLNIAPFITLTRANRNRISFAEVESRLGL
PLFVKPANQGSSVGVSKVTSEAQYDQAVTLAFEFDHKVVVEQGIKGREIECAVLGNDQPQ
ASTCGEIVLNSDFYAYDTKYIDDNGAKVVVPAAIAPEVNDKIRDIAIQAYQALGCAGMAR
VDVFLTAENDVVINEINTLPGFTNISMYPKLWQASGLGYTDLITRLIELALERHAADSAL
KTSM
NT seq
1095 nt
NT seq
+upstream
nt +downstream
nt
atggcaaagttgcgggtaggaatcgtatttggtggtaaatcagcggaacatgaagtgtca
ttgcaatcggcaaaaaatattgtcgatgccatcgacaagactcgctttgacgttgtgctg
ttaggtattgataaggaagggcaatggcacattagcgatgccagtaactatctgctcaat
tcagatgatccagcgcatattgcgctgcgtccttccgcgaccagcttggctcaggtcccg
ggtaaacaagagcaccagttgatcgatgcgcaaaacggtcagccactgccaacggtcgat
gttattttcccgatcgtacacggcacgttgggtgaagatggctctctgcagggtatgctg
cgcgtggcgaatctgccgttcgtcggttctgatgtcctgggttctgcggcctgtatggat
aaagacgtgaccaaacgtctactgcgcgatgccggattaaacatcgcgccatttattacg
ctcacccgtgccaatcgcaaccgcatcagctttgccgaggtggaatcccgccttggcctg
ccgctgtttgtgaaaccagccaaccagggctcatccgttggcgtcagtaaagtgaccagc
gaagcgcaatacgatcaggccgtcacgctggcatttgaattcgaccataaagtcgtggtg
gaacaagggattaagggccgcgagatcgaatgcgcggtgctgggcaacgatcaaccgcag
gccagtacctgtggcgagatcgtgctgaacagtgatttttacgcttacgacaccaaatac
attgacgataacggtgccaaagtggttgttccggcagcgatcgcaccggaagttaacgat
aagatccgcgacattgctattcaggcttatcaggcgctgggctgcgccggtatggcgcgc
gtggacgttttcttaaccgcagagaacgatgttgtgatcaatgagatcaacacgctgccg
ggctttaccaacatcagcatgtatccaaaattgtggcaggcgagcggcttaggctacacc
gatttgatcactcgcctgatcgaactggcgctggaacgtcatgcggcggatagcgcgttg
aaaaccagtatgtaa
DBGET
integrated database retrieval system
