Citrus x clementina (clementine): CICLE_v10014087mg
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Entry
CICLE_v10014087mg CDS
T02982
Name
(RefSeq) hypothetical protein
KO
K13217
pre-mRNA-processing factor 39
Organism
cic
Citrus x clementina (clementine)
Brite
KEGG Orthology (KO) [BR:
cic00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
cic03041
]
CICLE_v10014087mg
Spliceosome [BR:
cic03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
CICLE_v10014087mg
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TPR_14
Motif
Other DBs
NCBI-GeneID:
18053243
NCBI-ProteinID:
XP_006449619
UniProt:
V4W9A6
LinkDB
All DBs
Position
Unknown
AA seq
1159 aa
AA seq
DB search
MSYAEPGSIDELSPACKLAQAVKFISEFPNEKTKESFPSLSSRIGDAKSKSGNFIAMEVQ
ISNLESLSAEPNSPVGFGKQGLEEFIAEGSLDFDEWTSLISEIENSCPDDIEMIGLVYDS
FLAEFPLCYGYWRKYADHKARLCSIDKVVEVFERAVQSATYSVDVWFHYCSLSMSTFEDP
NDVRRLFKRALSFVGKDYLCHTLWDKYIEFEISQQRWSSLAQIFVQTLRFPSKKLHHYYD
SFKKLAGAWKEELECESDSAMEFQSELVLEGEVAAYYKDDETSSVIKDLLDPSVDLVRSK
AIQKYRFIGEQIYKEASQLDEKINCFENLIRRPYFHVKPLDDIQLKNWHDYLSFAEKQGD
FDWVVKLYERCLIPCADYPEFWMRYVDFMESKGGREIASYALDRATQIFLKRLPVIHLFN
ARYKEQIGDTSAARAAFPESYIDSDSRFIEKVTFKANMERRLGNFVAACDTYKEALETAA
EQRKFHTLPLLYVQFSRLTYTTTGSADNARDILIDGIKHVPNCKLLLEELIKFTMVHGGR
SHISIVDAVISNALYSRPDVLKVFSLEDVEDISGLYLQFLDLCGTIHDIRNAWNQHIKLF
PHTVRTAYECPGRETKSLRAFIRGKRESNVASPPQPFESEHLMPSASQDKKFSPPEKSYS
ESGHDATSLPSNQKSPLPENHDIRSDGAEVDILLSGEADSSSQDRMQQVPPEAAEQHSQD
ACDPEVLLLDLVHQVTNENETVLASEAFSEEDDVQREYEHESKKDLKPLSLEGLSLDPGG
NDSPGSLCATSHECEVPQKTNFSHESMRKSEAPRETSFSDGSVLGAGQNNNGSHFASSSM
GTQASSSAPIQTRTVSPSSSASHQNFIPEAHSRPQTPANSGRNWHEKQNPDRFHRDLRFG
YRGHSHKRQHQQRRFSSQRYPRNESGDQMPMNSRYPSQPLPSQNPQAQQGSQAQTQFLHS
LTAQAWPMQNMQQQTFASASQSEVPAQPVFYPQAQMSQYPSQSSEQQRLLQSNLAYNQMW
QYYYYQQQQQQQLFLQQQHLQLQQQHLQPLQQQQFMQQQQYQQQHSLYLQQQPQHQQLEQ
YQMQQQVQQQDQHPPQQWQLEQRQSEQQIGMSQIEKWNNNSSKQDQGVAQPNIAATTPAA
SPSLHLQQQSSRVNDIGMS
NT seq
3480 nt
NT seq
+upstream
nt +downstream
nt
atgtcttatgccgagcccggctcgatagatgaattaagcccagcctgtaaattagcacaa
gcagtaaaattcatttctgaatttccaaacgaaaaaacgaaagaaagttttccttctcta
tcttcaagaattggtgatgctaaaagtaagagtggtaatttcattgcaatggaggtgcag
atttcaaacttagagtctctgtccgcagagccaaactcgcctgttggttttggtaagcaa
ggacttgaggaatttattgctgaaggctcattggactttgatgaatggacttcacttata
tccgagattgagaattcatgccccgatgatatagagatgataggcctggtgtatgactct
ttcttggccgagtttcctttgtgctatggttactggaggaagtatgctgaccacaaggca
cgcttatgctctattgacaaggttgttgaagtctttgaacgagctgttcaatctgcaaca
tattctgttgatgtgtggtttcactattgtagtttgagcatgtccacattcgaagatcct
aatgatgtccgaagattattcaaaagagctttgtcgtttgtgggaaaagattacttgtgc
catacgttgtgggacaaatacattgaatttgaaatctctcagcaacgttggagttcatta
gctcagatttttgtgcaaactctgagatttccaagcaaaaaattacatcactattatgat
agttttaagaagttggctggggcttggaaagaggagttggaatgtgagagtgattcagct
atggaattccagtcagagttagtgcttgaaggtgaagtcgctgcgtactataaggacgat
gaaacctctagtgtcatcaaagacttgctagatccatctgttgatttggttagatctaaa
gcaatacagaaatatagattcattggagaacaaatctataaagaagccagccagttggac
gaaaaaataaattgctttgagaatcttattcgaaggccttatttccatgtaaagccactc
gatgacatccaattaaaaaactggcatgactatttgagctttgctgagaagcaaggggat
tttgattgggttgtgaaactttatgagaggtgcttaatcccttgtgctgattatcctgag
ttctggatgcgttacgtggatttcatggaaagtaagggaggaagagagatagcaagctat
gcactggatcgagcaactcaaatttttctgaagagactgccggtgatccatcttttcaat
gccaggtataaggagcaaataggagacacatctgctgcacgtgctgcctttcctgaaagt
tatattgactcagattcaagatttattgaaaaagtaacatttaaagctaacatggaaaga
cgtctgggaaattttgtggcagcttgtgatacatacaaagaagcattggaaactgctgca
gaacagagaaagtttcatacccttcctctgttatatgttcaattttcacgacttacatac
acgactactggtagtgcagacaatgccagagacattttaatagatggtatcaaacatgtg
ccaaactgcaaattgcttttagaggaactaataaaattcacaatggtgcatggaggacga
agtcacataagtattgtagatgctgttatctctaatgcattatattcgcgtccagatgta
cttaaagtttttagtctggaagatgtggaggatatatcaggcttatatttacagtttctt
gacctatgtggaacgatccacgacattaggaatgcatggaatcagcacatcaaattgttt
ccacacaccgtgaggactgcttatgagtgtccgggtagagaaacaaagtcgttgagagcc
ttcattagaggaaaacgggaaagtaatgttgcttcgccgccgcagccatttgaatctgaa
cacttgatgccgtcagcttctcaagacaagaaattttcacccccagaaaaatcttattcg
gagtctggccatgatgccacttccctaccatcaaaccagaaatctccattaccagaaaat
catgatattcgctctgatggtgctgaagttgatattcttctgtcaggagaagcagacagc
agttcacaggacagaatgcagcaggtacctcctgaagctgcagagcagcatagtcaagat
gcttgtgatcctgaagttttattgcttgatctagtacatcaagtcacaaatgaaaatgaa
acagtactagcttcagaggcattctctgaagaagatgatgttcagcgagagtatgagcat
gagtccaaaaaggatctgaagccactttcattggagggactttccttagatcctggagga
aatgattctccaggctctctgtgcgccacctctcatgagtgtgaagttcctcaaaaaacc
aatttttcacatgaaagcatgcggaagagtgaagctccacgtgaaaccagtttttcggat
ggaagtgtgcttggggctggccagaataataatggaagtcactttgcatccagttcaatg
ggcactcaagcatctagttctgcaccaattcaaaccagaacagtgagcccttcatcttca
gcaagtcatcaaaattttataccagaggcacattcacgtccacaaacacctgcaaatagt
ggtcgaaactggcacgagaagcaaaatcctgacagatttcacagggatctcagatttggg
tatcgaggacattcacataaacgacagcatcaacagcggcgattttcttcacaacgttat
ccacgaaatgaatccggtgatcaaatgcctatgaattcacgttatccctctcaacctttg
ccttctcaaaatccacaagctcagcagggcagccaagcacaaactcagttcctacacagt
ctaacagcgcaggcctggcccatgcagaacatgcagcagcagacttttgcctctgcatcc
cagtctgaagtacctgctcaacctgttttttatcctcaagcacagatgtcccaatatccc
tcacagagtagtgagcagcagcggcttctgcagagtaacctagcttataatcaaatgtgg
caatactattattatcaacagcaacagcagcagcagttgtttttgcaacagcagcatctg
caattacagcaacagcatctgcagccgcttcaacagcagcaatttatgcagcaacaacaa
tatcagcagcaacattcactttacctgcaacagcaaccgcaacatcagcaacttgagcag
tatcagatgcaacagcaggtccagcagcaagatcaacatcctccgcagcagtggcagcta
gagcagagacaatctgagcagcaaattggcatgtcacagattgagaaatggaataacaac
agctccaaacaggaccaaggagttgcacaaccaaatattgctgctacaacacccgctgca
tcgccatctctgcatctccagcaacagtcgtccagagtcaatgatattggaatgtcctaa
DBGET
integrated database retrieval system
