Citrus x clementina (clementine): CICLE_v10028261mg
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Entry
CICLE_v10028261mg CDS
T02982
Name
(RefSeq) hypothetical protein
KO
K06067
histone deacetylase 1/2 [EC:
3.5.1.98
]
Organism
cic
Citrus x clementina (clementine)
Pathway
cic03082
ATP-dependent chromatin remodeling
cic03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
cic00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
CICLE_v10028261mg
03083 Polycomb repressive complex
CICLE_v10028261mg
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
cic03036
]
CICLE_v10028261mg
Enzymes [BR:
cic01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.98 histone deacetylase
CICLE_v10028261mg
Chromosome and associated proteins [BR:
cic03036
]
Eukaryotic type
Histone modification proteins
HDACs (histone deacetylases)
Class I HDACs
CICLE_v10028261mg
HDAC complexes
Sin3A-HDAC complex
CICLE_v10028261mg
BRAF-HDAC complex
CICLE_v10028261mg
REST complex
CICLE_v10028261mg
SHIP complex
CICLE_v10028261mg
MiDAC complex
CICLE_v10028261mg
Polycomb repressive complex (PRC) and associated proteins
Noncanonical PRC1 (PRC1.6)
CICLE_v10028261mg
Heterochromatin formation proteins
Other heterochromatin formation proteins
CICLE_v10028261mg
Chromatin remodeling factors
NuRD complex
CICLE_v10028261mg
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Hist_deacetyl
Motif
Other DBs
NCBI-GeneID:
18034746
NCBI-ProteinID:
XP_006422366
UniProt:
V4SF14
LinkDB
All DBs
Position
Unknown
AA seq
493 aa
AA seq
DB search
MDTGGNSLPSGTDGVKRKVCYFYDPEVGNYYYGQGHPMKPHRIRMTHALLAHYGLLQNMQ
VLKPFPARERDLCRFHADDYVSFLRSITPETQQDQLRQLKRFNVGEDCPVFDGLFSFCQT
YAGGSVGGAVKLNHGLCDIAINWAGGLHHAKKCEASGFCYVNDIVLAILELLKQHERVLY
VDIDIHHGDGVEEAFYTTDRVMTVSFHKFGDYFPGTGDIRDIGYSKGKFYSLNVPLDDGI
DDESYHYLFKPIIGKVMEVFRPGAVVLQCGADSLSGDRLGCFNLSIKGHAECVKFMRSFN
VPLLLLGGGGYTIRNVARCWCYETGVALGVEVDDKMPQHEYYEYFGPDYTLHVAPSNMEN
KNSRQLLEEIRNKLLEYLSKLQHAPSVQFQERPPDSELPEADEDQEDGDERWDPDSDMDV
DDERVKREAVEPEQKDREGLKGMAEQARGFDMIADDSISTKVLDMSSMPIDEPSIKVEQE
NMSKASDHMYPHS
NT seq
1482 nt
NT seq
+upstream
nt +downstream
nt
atggacactggaggcaattctttaccatctggtactgatggcgttaagagaaaggtgtgt
tatttctacgacccagaggtgggcaattactactatggacagggtcacccaatgaaaccc
catcgcattcgtatgacccatgcccttctcgcccactacggcttgcttcagaacatgcag
gtcctcaaaccttttcctgctagggaaagggatctttgccgcttccatgccgatgattat
gtctccttcctcaggagtatcacccctgagactcagcaggatcagcttaggcagctcaag
cgctttaatgttggtgaagattgccctgtctttgacggtcttttctccttctgtcaaact
tatgctgggggctctgttggtggtgctgtcaagttgaatcacggcctctgtgatattgct
atcaactgggccggtggccttcatcatgctaagaaatgtgaagcttccggattctgttat
gtcaatgacattgtcttggccattttggagctacttaagcagcatgagcgtgtattatat
gtagatattgatatccatcatggagatggcgtggaggaagcattttatacaactgatagg
gtaatgactgtttcattccataagttcggagattattttcctggtacaggggatatacgt
gatattggttattcgaaaggaaagttctactcccttaatgttcctcttgatgatggtatc
gatgatgagagctaccattacttgttcaaaccgataatcggaaaagtgatggaagttttt
agacctggtgctgtggtcctccaatgtggtgctgactcattgtctggggataggttagga
tgcttcaatctttcaattaaaggtcatgcagaatgtgtcaaatttatgagatcattcaat
gtgcctctgttgctgctgggtggtggtggttacactattcggaatgttgctcgttgctgg
tgctacgagacaggagttgcacttggagtagaggttgatgacaagatgccacagcatgag
tattatgagtattttggtcctgactatactcttcatgttgctcccagtaacatggagaat
aagaattcgcgccagttgcttgaggaaataaggaataagcttctcgaatatctctcaaag
cttcaacatgcacccagtgtccagtttcaggaaagaccacctgattctgaacttccagag
gcggatgaagatcaggaggatggcgatgagagatgggatccagattctgacatggatgtt
gatgatgaacgagttaagagagaagcagttgaacctgagcaaaaagatcgggagggcctt
aaaggaatggccgagcaagctagaggcttcgacatgattgcagacgattctataagcaca
aaggttttagatatgagttcaatgccaattgatgaaccgagcatcaaagttgaacaagaa
aacatgagcaaggcatctgatcacatgtacccgcattcgtaa
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integrated database retrieval system
