Ctenopharyngodon idella (grass carp): 127521720
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Entry
127521720 CDS
T08802
Name
(RefSeq) very low-density lipoprotein receptor isoform X1
KO
K20053
very low-density lipoprotein receptor
Organism
cide
Ctenopharyngodon idella (grass carp)
Brite
KEGG Orthology (KO) [BR:
cide00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cide04131
]
127521720
Membrane trafficking [BR:
cide04131
]
Endocytosis
Clathrin-mediated endocytosis
Low-density lipoprotein receptor (LDLR) family proteins
127521720
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Ldl_recept_a
Ldl_recept_b
FXa_inhibition
cEGF
EGF_CA
SGL
Motif
Other DBs
NCBI-GeneID:
127521720
NCBI-ProteinID:
XP_051767057
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All DBs
Position
10:28118241..28140505
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AA seq
876 aa
AA seq
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MVTSILGLLILPICLQLCGFSRGSRTECEQSQFQCGNGRCIPSVWQCDGDMDCSDGSDET
SCVRKTCAEVDFVCRSGQCVPKRWQCDGEPDCEDGSDESIEMCHTRTCRVNEFSCGVGST
QCIPVFWKCDGEKDCDNGEDEINCGNITCAPLEFTCASGRCVSRNFVCNGEDDCGDGSDE
QDCAPSSCGPSEVPCGNNTCIPRSWLCDDDVDCQDQSDESPERCGRNPTPPAKCSPSEMQ
CGSGECIHRKWRCDGDPDCKDGSDEKNCSARTCRPDQFKCDDGSCIHGSRQCNGFRDCAD
GTDEVNCKNLTQCNGPDQFKCRSGECIEMSKVCNKVRDCPDWSDEPIKECNMNECLLNNG
GCSHICRDLTIGYECDCTPGLQLIDRKTCGDVNECLNPGICSQICINLKGGYKCECHNGY
QMDPTSGVCKAVGKEPCLIFTNRRDIRKLGLERREYTQIVEQLRNTVALDADFIQQTIFW
ADLGQKAIFSTVLDKQEASHTKVIDNVQMPVGIAVDWIYKNIYWSDLGSKSIAVANFNGT
KRKVLFNSGLKEPASIAVDPLSGFLYWSDWGEPAKIEKSGMNGIDRQVLVETDIQWPNGI
TLDLIKGRLYWVDSKLHMLCSVDLNGDNRRKVLQSPDYLAHPFALTVFEDRVFWTDGENE
AIYGANKFTGSDVTVLASNLNEPQDIIVYHELIQLSGTNWCNEKMENGGCSFMCLPAPQI
NKHSPKFTCVCPQGQTLASDGLRCIPEAPTAAPRDGGRVTPHPSHSKASAISKVASEPVH
AEGNISTSIHEVNSSAKGSAAAWAILPVLLLAMAAAGGYLMWRNWQIKNKKSMNFDNPVY
LKTTEEDLNIDISRHSASVGHTYPPLSVVNTEDDLS
NT seq
2631 nt
NT seq
+upstream
nt +downstream
nt
atggtcacgtctattctggggcttctcatcctgccaatatgtcttcagctgtgtggattt
tcgcgcggttcccgaacagaatgtgagcagtctcagttccagtgtgggaatggccggtgt
attccgtctgtgtggcagtgcgatggcgacatggactgctcggacgggagtgacgagacg
tcctgcgtgaggaagacttgtgccgaggtggacttcgtctgtcgcagtggacagtgtgtt
cccaagagatggcagtgcgatggtgaaccagactgtgaggatggctcagacgaaagcatc
gaaatgtgccacacgagaacctgtcgagtgaacgagttcagttgtggcgtcggctccacg
cagtgcattcctgtcttctggaagtgtgatggtgagaaagactgcgacaacggagaggac
gagattaattgtggaaacattacgtgcgcccctctggagttcacctgtgccagtggtcgc
tgtgtgtctcgtaatttcgtctgtaatggtgaggatgactgtggggatggcagcgacgaa
caggactgtgctccgtcctcctgcggacccagtgaagttccctgtgggaacaatacgtgc
attcctagaagctggctatgcgatgacgatgtggactgccaggaccaatcggatgagtcg
ccagagcgttgcggccgcaacccaacgccgccagctaagtgttcacccagtgagatgcag
tgcggctctggggaatgcatacacaggaagtggcgctgtgacggggacccagactgcaag
gatggcagtgacgagaaaaactgttctgcccgtacctgcaggcccgaccagttcaagtgc
gatgacggcagctgtatccatggcagccgacagtgcaacgggttccgagattgtgcagac
ggcacagatgaagtcaactgcaaaaacttaactcagtgtaacggtcctgaccagttcaag
tgtcggagtggagagtgcatagagatgagtaaagtgtgtaataaagtccgtgactgtcct
gactggagtgatgaacccatcaaagagtgcaatatgaacgaatgcctgctcaataacgga
ggctgctcgcacatctgccgtgacctgacgattggctatgagtgtgactgcacgccagga
ctccagctcattgatcgcaagacctgtggtgatgtcaatgagtgcctcaaccctggtata
tgtagtcaaatatgtataaatcttaaaggaggctataaatgtgagtgtcacaatggttat
cagatggaccccacctctggagtgtgcaaggctgtaggtaaagagccctgtcttattttc
accaatcgaagagatatccgtaaactaggcctggagcgccgtgaatatactcagattgtg
gagcagctgcggaacacagtagctctagatgctgacttcattcagcagacgatattctgg
gctgacctggggcagaaggcgatttttagcacagtgttggataagcaggaagcaagtcat
acgaaagtgattgacaatgttcagatgccagttgggattgcagtggactggatttacaaa
aacatctactggtcagacctgggcagtaagagcatagctgtggccaacttcaatgggacc
aagaggaaggtgctctttaacagcggcctgaaagaaccagcctctattgctgtggatcct
ctttcaggattcctgtattggtcagactggggcgagccagctaagattgagaagtctggt
atgaacgggattgacagacaagtccttgttgagactgatattcaatggcccaatggaatc
actcttgatttgattaagggaagactctactgggtggactccaagctgcacatgctctgt
agtgtagacttgaacggagacaaccgccggaaggtgctgcagtcaccagactacctggcc
cacccttttgcccttactgtttttgaggatcgagtgttctggacagacggtgaaaatgag
gccatctacggcgcaaacaagttcacaggatccgatgtaactgttctggccagcaacctc
aacgaaccccaggacatcattgtgtaccatgagctaatacagctgtctgggaccaactgg
tgtaatgagaagatggagaatggaggctgttccttcatgtgcctgccagctccacaaatt
aacaaacattcccctaaatttacctgtgtgtgtccgcaaggccaaacactcgcctcggat
ggcctgcgctgcataccagaggcacctactgccgcccctcgagatggagggagggtgacc
cctcaccccagtcactctaaagcatctgcaatatcgaaggttgcctctgaaccagttcat
gctgaaggaaacataagcacctccatacatgaagtaaattcatcagccaaaggatctgct
gctgcctgggctattctacctgtgttgttattggccatggctgccgcgggtggttattta
atgtggcgcaactggcagatcaaaaataagaagagcatgaacttcgataatccagtatat
ctgaagaccacagaggaagacctcaatatcgatatcagtagacacagtgcttcagtaggc
cacacatatcctcctctttcagtggtaaacacagaagatgacttgtcataa
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