Ctenopharyngodon idella (grass carp): 127521880
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Entry
127521880 CDS
T08802
Name
(RefSeq) toll-like receptor 8b
KO
K10170
toll-like receptor 8
Organism
cide
Ctenopharyngodon idella (grass carp)
Pathway
cide04620
Toll-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
cide00001
]
09150 Organismal Systems
09151 Immune system
04620 Toll-like receptor signaling pathway
127521880
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
cide04054
]
127521880
04090 CD molecules [BR:
cide04090
]
127521880
Pattern recognition receptors [BR:
cide04054
]
Membrane-bound pattern recognition receptors
Toll-like receptors
127521880
CD molecules [BR:
cide04090
]
Proteins
127521880
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LRR_8
LRR_4
LRR_1
TIR
LRR_5
TIR_2
LRR_9
LRR_6
Motif
Other DBs
NCBI-GeneID:
127521880
NCBI-ProteinID:
XP_051767307
LinkDB
All DBs
Position
10:complement(45380860..45385262)
Genome browser
AA seq
1015 aa
AA seq
DB search
MIFVFILICTAHSSQGLIWDWRKLPCDVTLSNSSVVLDCSERSLKKIPKNLIWNTTELDF
ANNEIRYLPKDAFWNLTNVTRINLRKNRIEKCLEKDRGIFSRLANLETLLLDNNKISAIP
RDLPPGLQQLSLNSNRIKNIGPSDFERTRKLKVLKLNKNCYHNVSIELIIHKETFQHLQL
TELELSRNGIQKIPSALPGSLNTLSLLLNRIERVHASDLNNLTNLTVLDLSGNCPFCFTA
PFPCTTCRTKNHALHIHPDAFNELSQLQDLRLSGNSLKTIKSSWFRNLTKLKYLYLSFNS
LISEFQSGQFFSVLPQVEVVDFSYNNPYQTFYQRMNLSKGFGSLKSLHTLHIEGYNFHNL
CEEDLRPLFGLRNLSVLNLGVNFLQHINISVFRNFHNLSLISLIDNRLTLTSPLWRRECR
NEILADEDEGDRREDPYIHTNEQFRNYPPFTKAECLATGPVLDLSRNNIYHIKQTYFTGA
ENTTCLNLSSNFIASYFNGTEFVHFPKLKYLDLSHNRVYMRSDSALNELKELEVLDLSHN
KHYFEVAGVRSTLTFLENLQFLKVLNLSWNEINTLTNKTLQSDSLKELQFQGNRLDIMWK
KGRGFIGLFKSLSNLTHLDISYNKLAEIPDDIFSYFPCTLKYLCMSRNTLADFKWEQLKY
LPHLETLDLSMNKLSKVTRNLSKHTNSLRVLDLSHNLIVKLNHSFLKDVKSLMILNLAFN
YLKHLSDASFQTSSDHSLRLLNLQRNPIHCSCDLLDFILWLEKSDTVLPYLATDILCDLP
ESKRGHPMINLDFKNACINNSIAQILYVLTSSIIIVMMSTTIAIHVFYWDISYIYNFWTA
KIKSYYLKTTDCTYDAFVMYDTNDPMAEEWVLNHLRFELEDRGKRVRPLCLAERDWTPGT
PIMDNLNQSIHRSRKTIFVLTEGFVHSGIFKMAAFLAQQRLLEEGVDVMVLVLLEPVLRQ
SRILNLRRCLCGHSVLEWPRNPAAEGWFWQSLRNAVRFESQGGQSKMFTNYFSGR
NT seq
3048 nt
NT seq
+upstream
nt +downstream
nt
atgatatttgtgttcattttgatttgtactgcccactcgtctcaaggcctcatctgggat
tggagaaagcttccatgtgatgtaacactttccaacagctctgttgtcttggactgttca
gaaagatctttgaaaaaaatcccgaaaaacctgatttggaatacaactgaactagacttt
gcgaacaatgaaatacgttacctcccaaaggatgccttctggaatctgactaacgttaca
cggataaacctcagaaagaatcggattgaaaaatgccttgaaaaagaccgagggattttc
tcaagattggctaacctggagactttgctactcgacaataataagatctcagcaattcct
agagaccttcctcctggattgcaacagctgagcctcaattccaaccgtatcaagaacatt
ggaccatcagactttgaaagaacaaggaaactcaaagttttgaaattaaataagaactgc
tatcataatgtcagtatagaactgataattcacaaagaaacatttcagcatttacaacta
actgagctagaactgtccagaaatggaatacagaaaataccatcggctttacctggatcc
ctcaacacactctcacttcttctaaataggattgagcgagttcatgcctctgacctgaac
aacctaacaaacctgacagttcttgatttatctggaaactgccctttttgttttactgct
cctttcccatgcactacctgtcggacaaagaatcacgctctacacattcatccggatgct
ttcaatgaattatcccaactgcaagacttacgactgtctggaaattctttaaaaacaatc
aaatcgtcatggttccggaatcttactaagttaaagtatttgtatctttccttcaactca
ttgataagtgaatttcaaagcggacaattcttcagtgtgttaccacaagtggaagttgta
gatttctcatataataatccatatcaaacattttaccaaagaatgaatctctcaaaaggc
tttggtagtttgaaatcattgcatacacttcacatagaaggctacaatttccacaatctt
tgtgaggaagatctccgacctctctttgggttgagaaacctatccgttctaaacttggga
gtcaactttctccaacatatcaatatatcggtgttcagaaactttcacaacctgtctttg
atttcattgattgacaacaggctaacactcacaagtcctctttggagacgagagtgtaga
aatgaaatccttgctgatgaggacgagggagacagacgcgaagacccctacattcacaca
aatgaacagttccgcaattacccaccgtttaccaaagctgagtgtctggcaacaggacca
gttttggacctcagtaggaacaacatttaccacatcaaacaaacttactttacaggagca
gagaataccacatgcctcaatctttcctccaacttcattgcttcatatttcaatggtaca
gagtttgttcactttcccaagctgaagtaccttgacttgtctcacaacagagtctacatg
cgttcagattcagcactgaatgaactgaaagaattagaagttttggatctaagtcacaac
aaacattactttgaggtggcgggtgtcaggagcactctgacattcctggaaaacctccag
ttcctcaaagtgctgaatctcagttggaatgagataaatacgctgaccaataagactctg
cagagcgactcactgaaggagctacagtttcaaggcaatcgactggatataatgtggaag
aagggccgtggattcataggtctttttaagtctctctcaaacttaacacaccttgatata
tcatataacaagcttgccgaaataccggacgatattttcagctatttcccatgtacgcta
aaatatctttgcatgagcaggaacacacttgctgattttaagtgggaacagctcaaatat
ttaccccacttggagactctggatctaagtatgaacaaattgagtaaagtcactagaaac
ctatcaaaacatacaaattcattgagggtcttagacttgagccataatctgatcgtcaag
ttgaatcacagctttctcaaagatgtcaaaagcctgatgatccttaatctcgctttcaac
tatttaaaacatttaagtgacgcatccttccagacaagtagcgatcactccctacgcttg
ctgaacctgcagagaaaccctatccattgctcctgtgaccttctggacttcattctctgg
ttagagaaaagtgacacagtccttccttatctagcaacagacatcttatgcgatcttccg
gaatccaaaaggggacatccaatgatcaatctggactttaaaaatgcctgcatcaacaat
agtatcgctcaaatcctatatgtactcacctcatccatcattattgtcatgatgtctaca
actatcgcaatacatgtgttctactgggacatatcgtacatttataatttctggacagcc
aaaattaaaagttattacttgaagacgactgactgcacttatgatgcttttgttatgtat
gacaccaatgatccgatggcggaagagtgggtactgaaccacttgcgttttgagttggaa
gatagaggaaaacgagttcgtccgttatgtttggcggaaagagattggactcctggtaca
cccatcatggataacctgaaccagagcatacaccggagtaggaagacaatatttgtgttg
acagagggatttgttcacagtgggattttcaagatggcggctttcctagcgcaacaaagg
cttctggaagagggcgtggacgtgatggtgctggtattgttggaaccggttcttcggcag
tcgagaatcttaaacttgcggcgctgcctgtgtggacacagtgtgctggagtggcccaga
aacccggcagcagaaggctggttctggcagagtttgagaaacgcagttaggtttgagagt
caaggtggtcaaagcaaaatgtttacaaattacttcagcggacgatga
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