Chryseobacterium sp. IHB B 17019: ATE47_16620
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Entry
ATE47_16620 CDS
T04193
Name
(GenBank) exodeoxyribonuclease III
KO
K01142
exodeoxyribonuclease III [EC:
3.1.11.2
]
Organism
cih
Chryseobacterium sp. IHB B 17019
Pathway
cih03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
cih00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
ATE47_16620
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cih03400
]
ATE47_16620
Enzymes [BR:
cih01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.2 exodeoxyribonuclease III
ATE47_16620
DNA repair and recombination proteins [BR:
cih03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
ATE47_16620
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exo_endo_phos
Motif
Other DBs
NCBI-ProteinID:
ALR32042
LinkDB
All DBs
Position
complement(3598016..3598789)
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AA seq
257 aa
AA seq
DB search
MKIATYNVNGVNGRLPVLLQWLKEAQPDIVCLQELKAPQERFPVNAINEAGYKAIWKGQK
SWNGVAILTKDLDIVEVQDSLPGDPDDFQSRYIEAIIDNIVVCCLYLPNGNPYPGPKFDY
KLAWLKRFKKRTNELIKMELPAILIGDFNIIPTPFDVHKPERWENDALFRTEVRKVYQDL
MKKGWLDSIRTLYPEEKIYTFWDYLYKAYQRNAGIRLDHILLSPYLSSALQAGGVDSHVR
GWEKSSDHAPVWIELKR
NT seq
774 nt
NT seq
+upstream
nt +downstream
nt
atgaaaatagcaacatataatgtcaatggtgtcaacggccgtctgccggttttacttcaa
tggctgaaagaagcccagccggatattgtctgtcttcaggaattaaaagccccacaagaa
cgatttcctgtaaatgccattaatgaagccggttacaaagctatttggaaagggcagaaa
agctggaacggggttgcgatacttaccaaagatcttgatattgtagaggtgcaggattct
ttaccgggagatcctgatgatttccagagccgatatatagaagcaattattgataatatt
gtagtttgctgtctttatcttccgaacgggaatccttatccgggacctaagtttgactat
aaattagcatggcttaagcgctttaaaaaacgaacaaatgaattaataaaaatggaactt
ccggctattcttatcggggattttaatattattccgacaccatttgatgtccataagccg
gaacgttgggaaaatgatgcccttttcaggacagaagtaagaaaagtataccaggattta
atgaaaaaagggtggcttgattctatccgaaccctttatccggaggaaaaaatctatact
ttctgggattatttgtacaaagcttatcagcgtaatgcaggaatcaggctggaccatatt
ctgttaagtccttatttaagttcggctttgcaggcaggaggtgttgacagtcacgtgcgc
ggttgggagaaaagtagtgaccatgctcccgtctggatagaattaaaaagataa
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