Carya illinoinensis (pecan): 122282827
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Entry
122282827 CDS
T08745
Name
(RefSeq) autophagy-related protein 16
KO
K17890
autophagy-related protein 16-1
Organism
cill
Carya illinoinensis (pecan)
Pathway
cill04136
Autophagy - other
Brite
KEGG Orthology (KO) [BR:
cill00001
]
09140 Cellular Processes
09141 Transport and catabolism
04136 Autophagy - other
122282827
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cill04131
]
122282827
03029 Mitochondrial biogenesis [BR:
cill03029
]
122282827
Membrane trafficking [BR:
cill04131
]
Autophagy
Autophagosome formation proteins
Atg12 conjugation proteins
122282827
Others
Rab GTPases of specific organelles
Auto phagosome
122282827
Mitochondrial biogenesis [BR:
cill03029
]
Mitochondrial quality control factors
Mitophagy factors
Autophagy-related proteins
122282827
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
ATG16
ANAPC4_WD40
NBCH_WD40
WDR54
Cytochrom_D1
Motif
Other DBs
NCBI-GeneID:
122282827
NCBI-ProteinID:
XP_042950804
LinkDB
All DBs
Position
11:complement(2007144..2011724)
Genome browser
AA seq
509 aa
AA seq
DB search
MSQDQIAREAIKHALKSLRKRHLLEEGAHSPAFIALSRPIVSQGSEWKEKAENLELELQQ
CYKAQSRLSEQLVVEVAESRASKASLQEKEAAVSNLQAELTQTRDECFQLKADLEEKIKA
LELLICENHQLKAQLEEMTIKAKNAEAENKMLVDRWMLQKMQDAERLNEVNALYDEMVNR
LKASGLENLARQQVDGVVRRNEDGAEFFVESTVPSLCKQRIHAHEGGCASILFEYNSSKL
ISGGQDRSIKMWDTSTGSLSHTLYGCLGSVLDLTITHDNRSVIAASSSNNLYVWDVNSGR
VRHTLTGHTDKVCAVDVSKISSRHVVSTAYDRTIKVWDLNKGYCINTIIFPSNCNALCFS
MDGQTICSGHVDGNLRLWDIHSGKLLSEVAAHSLAVTSISLSRNGNVVLTSGRDNLHNLF
DMRSLEVCGTLRAIGNRVASNWSRSCISPDDNYVAAGSADGAVYIWSISKADIVSTLREH
TSPVLCCSWSGLGKPLASADKNGIICTWS
NT seq
1530 nt
NT seq
+upstream
nt +downstream
nt
atgtcacaggaccagatagcgagggaggcgataaagcacgctttgaagtctctacggaag
cggcatttgctcgaagaaggtgctcattctccggctttcatcgctctttccagaccaatc
gtctctcagggctcagaatggaaagagaaagcagaaaatctggagttggaactccagcaa
tgttacaaagctcaatctcggttgtccgagcaacttgtggtcgaagtagctgaatcccgg
gcttcaaaagcctcacttcaagagaaagaagcagctgtctcaaatctccaggcagagttg
actcaaacaagggatgaatgttttcaattgaaggcagacttggaagaaaagataaaagct
ttagaattgcttatatgtgagaaccatcaactcaaagctcaactggaagagatgactatt
aaagctaagaatgctgaggctgaaaataagatgttagttgatcgctggatgctgcagaag
atgcaggatgctgaacggctcaatgaggtaaatgcactttatgacgaaatggttaatcgg
ctcaaggccagtggtttagaaaatcttgctaggcagcaggttgatggtgttgttcgccga
aatgaagatggtgctgaattctttgtggagtcaactgttccctccctatgcaagcagagg
atacatgcccatgaaggtggttgtgcctccatattgtttgagtacaattcctccaaactc
attagtggaggacaggaccgatcaatcaagatgtgggacacgagcactggatcattaagt
catactctttatggttgccttgggtctgttcttgatcttaccattacccatgataataga
tctgtcattgctgcaagcagctcaaacaacttatatgtatgggatgtcaattcaggtcgt
gtacgccatactcttactggtcacacagataaagtttgtgctgtagatgtaagcaaaatc
tcaagtcgtcatgttgtcagtactgcttacgatcgtaccataaaagtttgggacttgaat
aagggttactgcatcaacacaatcattttccccagcaactgtaatgctctttgcttcagc
atggacggacaaaccatctgttctggtcatgttgatgggaatcttcgtttatgggacatt
cactcaggaaagctacttagtgaagttgccgcacattcacttgctgttacatctatctct
ttgtctcgaaatggaaatgtagtattgactagtggaagggacaacttgcataatttgttt
gatatgcgatcgctagaagtttgtggcacacttagagcgataggaaacagagtggcatca
aattggagccgatcctgtatcagtccagatgacaactatgtagctgctggatccgccgat
ggagctgtttatatttggtccatttctaaagctgatattgtcagcactctcagggaacac
acttctcctgtactgtgttgttcatggagtgggcttgggaaacctctagcctcggcagac
aagaatggaattatttgtacctggtcatga
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