Carya illinoinensis (pecan): 122290663
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Entry
122290663 CDS
T08745
Name
(RefSeq) methionine--tRNA ligase, chloroplastic/mitochondrial isoform X1
KO
K01874
methionyl-tRNA synthetase [EC:
6.1.1.10
]
Organism
cill
Carya illinoinensis (pecan)
Pathway
cill00450
Selenocompound metabolism
cill00970
Aminoacyl-tRNA biosynthesis
cill01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
cill00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00450 Selenocompound metabolism
122290663
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
122290663
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
cill01007
]
122290663
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
cill03016
]
122290663
Enzymes [BR:
cill01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.10 methionine---tRNA ligase
122290663
Amino acid related enzymes [BR:
cill01007
]
Aminoacyl-tRNA synthetase
Class I (U)
122290663
Transfer RNA biogenesis [BR:
cill03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
122290663
Prokaryotic type
Other AARSs
122290663
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_1g
tRNA-synt_1
tRNA-synt_1e
Anticodon_3
Anticodon_1
tRNA-synt_1f
Motif
Other DBs
NCBI-GeneID:
122290663
NCBI-ProteinID:
XP_042954244
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All DBs
Position
1:55806131..55813745
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AA seq
643 aa
AA seq
DB search
MDRNPQYKILVSTFETLSKEKKGEKKMAAKMNQSIQNAIWLLNPLHHHPLSSKVKPRLHF
RRQPFFVSSTSSSSSMSSKRALFCTCTSSSADNNGLHDGGPFVITTPLYYVNAPPHMGSA
YTTIAADAIARFQRLLGKKVVFITGTDEHGEKIATAAAAQGSNPSEHCNVISQAYKTLWK
DLEIAYDKFIRTTNPKHEAIVKEFYLRVLANGDIYRADYEGLYCVNCEEYKDEKELLDNN
CCPMHLKPCVSRKEDNYFFALSKYQKLLEATLTENPNFVQPSFRLNEVQSWIKSGLRDFS
ISRASVDWGIPVPNDNRQTIYVWFDALLGYVSALAEDNEQSNLESAVSSGWPASLHLIGK
DILRFHAVYWPAMLMSAGLSLPKMVFGHGFLTKDGMKMGKSLGNTLEPNDLVRKFGPDAV
RYFFLREVEFGNDGDYSEDRFINIVNAHLANTVGNLLNRTLGLLKKNCQSTLVADSTIAA
EGNVFRDTVEKLVEKARVHYERLSLSSACEAILEIGNAGNSYMDERAPWSLFKQGGEASE
AAAKDLVIILEALRIIAIALSPVTPSLCWRIYGQLGFSKDEFDSATWTATKWGGLKGGQV
MAQPKPVFARIENQMEDEDGGEAAKKVVKNKDKVPQTQGVAEA
NT seq
1932 nt
NT seq
+upstream
nt +downstream
nt
atggatagaaacccccaatataaaatccttgtttcaacgtttgagactttgagtaaggag
aagaagggggaaaaaaaaatggcagcgaaaatgaaccagtcgatacagaacgctatctgg
ctcctaaatcctctacatcatcatcccctcagttccaaagtcaagccccgtctccatttt
cgtcgacagcccttcttcgtgtcatctacttcttcttcttcttcaatgtcgtctaaaaga
gctttattctgcacctgcaccagctcaagtgctgacaataatggtctccacgatggcggg
ccctttgtcataacaactccgctttattatgtgaatgcccctccccatatgggcagtgct
tacaccactatcgctgccgatgccattgcccgctttcagagactgttgggaaagaaggtc
gtattcatcactggcacggatgagcacggagagaaaattgctacagctgcggctgcccag
ggttccaacccaagtgagcattgcaatgtcatttcacaagcttataagactctctggaaa
gatttagaaatagcttatgataagttcattcggacaactaatcccaagcatgaagcaatc
gtgaaggaattttacttgagggttcttgccaatggtgatatataccgggctgactacgag
ggactatattgcgtcaactgtgaggaatacaaggatgagaaagaattgctggataataac
tgttgccctatgcaccttaagccatgtgtttcgcggaaagaggataactacttctttgcc
ctatcaaaatatcaaaaattattggaagcaactttgacggaaaatccaaattttgtgcag
ccttcattccgtttgaatgaggtgcaaagctggatcaaaagtgggctgagggacttttcc
atttcccgagcatcggtggattggggcatcccagttcctaatgacaataggcaaactata
tatgtgtggtttgatgctttattgggttatgtatcggcactagcagaagacaatgagcaa
tctaatttggaaagtgccgtttcttcaggttggcctgcgtcactgcacttgattgggaag
gatattttgcgattccatgcagtttactggccagctatgctaatgtctgctggacttagc
cttccaaagatggtgttcggccatggatttttgaccaaggatggcatgaagatggggaag
tcactaggaaatacactggaaccaaatgatctggttcgtaaatttgggcccgatgcagtc
aggtacttcttccttagggaggtggaatttggtaacgatggggactattctgaagatcgt
ttcatcaatattgtcaatgcacatcttgccaatacagttggaaatcttcttaaccgtact
ctcggacttttaaaaaagaactgccaatctactttggtagctgattcaacgattgcagct
gaaggaaatgtattccgggacactgtagagaagttggttgaaaaagcccgggttcattat
gaaaggctttcattatcatcagcttgtgaggctattttagagattggcaatgccggtaat
tcctacatggatgaacgggcaccctggtctctctttaagcaagggggtgaagcttctgaa
gcagctgcaaaggaccttgtgattatattggaagcattgaggattatagcaattgcatta
tccccggtgacaccaagcttatgctggagaatatatggacagcttggcttctcaaaggac
gagtttgactctgcaacatggactgcgaccaagtggggtgggctaaaaggtggtcaggtc
atggctcaaccaaaaccagtctttgcaaggattgaaaaccaaatggaagacgaagatggg
ggtgaagcagctaaaaaggtagtgaaaaacaaggacaaagtacctcagacccaaggggtt
gcggaggcgtag
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