Carya illinoinensis (pecan): 122294305
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Entry
122294305 CDS
T08745
Name
(RefSeq) protein argonaute 5
KO
K11593
eukaryotic translation initiation factor 2C
Organism
cill
Carya illinoinensis (pecan)
Brite
KEGG Orthology (KO) [BR:
cill00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cill03019
]
122294305
03036 Chromosome and associated proteins [BR:
cill03036
]
122294305
Messenger RNA biogenesis [BR:
cill03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
122294305
Chromosome and associated proteins [BR:
cill03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
122294305
RNA interference (RNAi) pathway
RITS (RNA-induced transcriptional silencing) complex
122294305
microRNA pathway
RISC loading complex
122294305
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Piwi
ArgoN
PAZ
ArgoL1
ArgoL2
ArgoMid
Motif
Other DBs
NCBI-GeneID:
122294305
NCBI-ProteinID:
XP_042958860
LinkDB
All DBs
Position
14:complement(27050736..27058490)
Genome browser
AA seq
993 aa
AA seq
DB search
MSRRGGGRQPESRRNQPSPASSSSQQGGGRSRGGGGGSGGGRGRGGGGRGRGGPPPASSI
PANPPPPTPPKAADYPAAPSPSVHITAASSAPSSSAPPPPDTITISAAAPSSELKERLTL
QASAPPTSSKAICCPKRPGFGTAGRKTVVRANHFLVEVADRDLYHYDVSITPEVTSKKIN
RDVMRQLIELYGESHLGRRRPAYDGRKSLYAAGPFPFESKEFVVKLAENDDRPAPSGSAR
KERQFKVAIKLASKSDLHHLREFLRGRQLDVPQETIQVLDVVLREAPSNRYTVVGRSFFG
LELGQKGDLGDGLEYWRGYYQSLRPTQMGLSLNIDVSARAFYESILVTEFVAKNFNINFS
RHLSDHDRLKIKKALRGIKIEVTHTGYTKRYKVTGVSTQTISQLMFTLDDKKTKKSVVQY
FRERYNIGLQHVSLPALQAGSDASPIYLPMELCKIVAGQRYSKRLNEKQVTNLLRATCQR
PQQREGSIKEMVMRNNFSGNVLVNEEFGIKVKDELAVLDARVLPSPVIRYHDTGREQREQ
PRMGQWNMMNKKMINGGRVDFWTCVNFSARAHRDLPYHFCEQLIDMCSSKGMVFNPEPLV
PIRTAQSGQIERALMDIHKQCVEKFKQIGVANKQLQLLIIILPDIKGSYGKIKRICETEL
GIVSQCCQPRQASKPNNNQYLENVSLKINVKVGGRNSVLHDAIQRNIPLLTDRPTIVFGA
DVTHPQPGEDSSPSIAAVVASMDWPEVTRYRGIFSSQTHRDEIIQDLYKSVQDPQRGLVH
QGMIRELLIAFRRSTGHKPHRIIFYRDGVSEGQFSQVLLYEIDAIRKACLSLEEGYLPPI
TFVVVQKRHHTRLFPMNHNSRDQTDRSGNILPGTVVDSKICHPTEFDFYLNSHAGIQGTS
RPTHYHVLYDENRFTADALQMLTNNLCYTYARCTRSVSIVPPAYYAHLAAFRARYYIEGE
TSDSGSTSGSESRVEFRPLPLIKDNVKDVMFYC
NT seq
2982 nt
NT seq
+upstream
nt +downstream
nt
atgtcacgacgaggcggtggcaggcagcccgaatctcgccggaaccaaccatctccggcg
tcttcatcgtctcagcaaggcggtggaagaagcagagggggtggtggcggcagtggagga
ggccgtggtagagggggaggagggagaggccgtggtggtcctccgccagcctcttcaata
ccggccaatccacctccgcctacgcctccaaaggcagctgattatcctgctgcaccttca
ccgtcggttcatattacggcggcttcttcagcgccatcgagctcggctccgccgccaccg
gacacgattacgatctcggcggctgctccgagcagtgaactcaaggagcggctaacattg
caggcttcggcgccgccgacttcgtcgaaggccatatgctgtccgaagaggccaggattc
ggtaccgctggccgaaaaaccgtggtccgagctaatcatttcttggtagaagtggcggac
agggatctctatcattacgacgtgtcgataacgcccgaggtaacctctaagaaaatcaac
agggatgtaatgaggcaattaattgagttgtacggtgagtcacatttgggaaggcgaagg
cccgcttatgatggcaggaagagcctatatgcggcaggtccgtttccatttgaatccaag
gaatttgttgtcaagttagctgaaaatgacgatcgacctgccccatccggttcagcgagg
aaagaaagacagttcaaggtggcaatcaagttggcttctaaatctgaccttcatcatttg
agggagtttttacgtggtaggcagctggatgttccgcaagagacaatacaagttcttgat
gtggtccttagagaggcaccatcaaacaggtatactgttgtcgggaggtcattttttggt
ttagaattgggccagaaaggtgatctgggtgatggccttgaatattggagaggctactat
cagagtcttcggccaacccagatggggctctctcttaatattgatgtgtctgcccgagct
ttctacgaatcaattctcgtgacagaatttgtggcaaaaaattttaatatcaatttttca
aggcatctgtctgatcatgatcgtctgaagattaaaaaagctttgagaggaataaagata
gaagttactcatacggggtataccaaacgatacaaagtgactggggtatcaacacaaaca
attagccagttaatgtttactctggatgacaagaaaacaaagaagtcggttgttcaatat
tttcgtgagagatataatattgggcttcagcatgtgtcgttgcctgcccttcaagctggg
agtgatgcaagtcctatttatttgcccatggagctttgtaagattgttgctggacagagg
tactctaagagattaaatgaaaaacaagtaactaacctattaagagcaacttgccaacgg
cctcaacaaagggaaggtagtatcaaggagatggttatgcggaataattttagtgggaac
gtgcttgtaaacgaggaatttggtattaaagtaaaagatgaacttgctgtgcttgatgct
cgagttttgccatctccagtgattagataccatgatactggtagagaacaaagggaacag
cccaggatgggacagtggaacatgatgaacaagaaaatgattaatggtggtagagtggac
ttctggacatgtgtgaacttctctgcacgagcgcacagggatttgccttatcatttctgt
gagcaattgatcgatatgtgcagcagcaaaggaatggttttcaatccagaacccttggtt
cccatacgtacagctcaatctggtcaaattgagagggctctcatggatattcacaaacaa
tgtgtggaaaaatttaaacaaattggtgtggcaaataagcaactccaactgttgataatt
attttgcctgatatcaaggggtcgtatgggaaaattaaacgaatctgtgaaactgaactc
ggaattgtttctcagtgctgtcagcccaggcaggcatcgaagcctaacaataatcagtat
cttgagaatgtatccctcaagattaatgtgaaggttgggggacgtaatagtgtgctacat
gatgctattcaaagaaacattcctctcttgacagaccgtcctacaattgtatttggtgcg
gatgtgacacatccacaaccaggggaggactctagtccttcaatagcagcggtagtggct
tccatggattggccggaggttactcggtatagaggaattttctcatcacaaactcaccgt
gatgaaattatacaagatctctataaatcagtacaagatcctcaaaggggtttagttcac
caaggaatgattcgagaactgcttattgcattcagaagatcaaccggacataaaccccac
aggattatattttacagggatggtgtaagtgagggacaattcagtcaagttctgctttat
gagattgatgcaataagaaaggcctgtctctcactagaggagggatatctacctccaatt
acctttgtcgtagttcagaaaagacatcatacacgccttttccctatgaatcataatagt
cgtgatcagacagacaggagtggcaacattcttccaggtactgttgttgactccaagatt
tgtcatccaacagaatttgacttttaccttaacagccatgctggaattcagggaactagt
aggcccactcattaccatgtcttgtatgatgagaatagattcactgcagatgccttacaa
atgctgacaaacaatttatgttacacgtatgcaaggtgcactcgatctgtttccatagtt
cctcctgcatattatgcccacttggcagcttttcgggcacgctattacatagagggcgag
acatcagacagtggttctacaagtgggagtgagagcagagtggagttccggccccttcct
ctaatcaaggataacgtgaaagatgtgatgttttattgctaa
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