Carya illinoinensis (pecan): 122308919
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Entry
122308919 CDS
T08745
Name
(RefSeq) coatomer subunit alpha-1
KO
K05236
coatomer subunit alpha
Organism
cill
Carya illinoinensis (pecan)
Brite
KEGG Orthology (KO) [BR:
cill00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cill04131
]
122308919
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
cill04147
]
122308919
Membrane trafficking [BR:
cill04131
]
Endoplasmic reticulum (ER) - Golgi transport
Retrieval pathways
Coat protein complex I (COP-I)
122308919
Exosome [BR:
cill04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
122308919
Exosomal proteins of bladder cancer cells
122308919
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
COPI_C
Coatomer_WDAD
WD40
ANAPC4_WD40
NBCH_WD40
zinc_ribbon_9
Motif
Other DBs
NCBI-GeneID:
122308919
NCBI-ProteinID:
XP_042978133
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Position
5:complement(8174438..8181977)
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AA seq
1218 aa
AA seq
DB search
MLTKFETKSNRVKGLSFHSKRPWILASLHSGVIQLWDYRMGTLIDRFDEHDGPVRGVHFH
KSQPLFVSGGDDYKIKVWNYKLHRCLFTLLGHLDYIRTVQFHHEYPWIVSASDDQTIRIW
NWQSRTCISVLTGHNHYVMCASFHLKEDLVVSASLDQTVRVWDIGALRKKTVSPADDILR
LSQMNTDLFGGVDAVVKYVLEGHDRGVNWAAFHPTLPLIVSGADDRQVKLWRMNDTKAWE
VDTLRGHMNNVSCVMFHAKQDIIVSNSEDKSIRVWDVTKRTGVQTFRREHDRFWILASHP
EMNLLAAGHDSGMIVFKLERERPAFAVSGDSLFYTKDRFLRFYEFSTQRDTQVIPIRRPG
STSLNQSPRTLSYSPTENAVLICSDVDGGSYELYVIPKDSIARGDSLQDAKKGAGGSAVF
VARNRFTVLDKSSNQVLVKNLKNEIVKKSGLPIAADAVFYAGTGNLLCRAEDRVIIFDLQ
QRIVLGDLQTPFIKYVVWSHDMESVALLSKHAIIIANKKLVHQCTLHETIRVKSGAWDDN
GVFIYTTLNHIKYCLPNGDSGIIRTLDVPIYITKVSGNTIFCLDRDGKSRSIVIDATEYI
FKLSLLKKRYDHVMSMIRNSQLCGEAMIAYLQQKGFPDVALHFVKDERTRFNLALESGNI
QIAVASATAIDEKDYWYRLGVEALRQGNAGIVEYAYQRTKNFERLSFLYLITGNNEKLSK
MLKIAEVKNDVMGQFHNALYLGDVRERVKILENVGHLPLAYITASVHGLQDVAERLAAEL
GDNAPALPEGKTASLLMPPPPVICSGDWPLLRVMKGIFEGGLDNVGRGAADEDEEAADGD
WGEELDVVDVDGLQNGDVTAILEDGEVAEENEEEGGWDLEDLELPPEADTPKASANARSS
VFVAPTPGMPVSQIWTQRSSLAAEHAAAGNFDTAMRLLSRQLGIKNFAPLRPMFLDLHTG
SHTYLRAFSSAPVISLAVERGWNESASPNVRGPPALVFNFSQLEEKLKAGYKATTAGKFT
EALRLFVSILHTIPLVVVESRREVDEVKELVIIVKEYVLGLQMELKRREIKDNPVRQQEL
AAYFTHCNLQLPHLRLALLNAMTVCYKTKNLATAANFARRLLETNPTVESQAKTARQVLQ
AAERNMKDVSQLNYDFRNPFVICGATYVPIYRGQKDVSCPFCSSRFVPSQEGQLCTVCDL
AVVGADASGLLCSPSQIR
NT seq
3657 nt
NT seq
+upstream
nt +downstream
nt
atgctgacgaagttcgagacgaagagtaatagagtgaagggactaagtttccacagcaaa
aggccttggatcctcgcgagtctccacagcggcgtgatccagctatgggactaccggatg
gggactctgatcgacaggttcgacgagcatgatgggcctgttcggggcgttcatttccac
aaatctcagcccctattcgtgtctggaggggatgactacaagattaaagtttggaactac
aagttgcacaggtgtcttttcactcttcttggacatctagattatattcgcacagtgcag
tttcaccatgaatatccatggatcgtgagtgccagtgatgatcagactattcgtatttgg
aattggcagtcacgcacttgtatatctgttttgacgggccacaatcactatgttatgtgt
gcctcattccaccttaaagaagaccttgttgtgtcagcctcccttgatcagactgttcga
gtctgggatattggtgccctcagaaagaagacagtatcccctgcagatgacatattgcgg
ttgagtcagatgaacactgatctttttggtggtgttgatgcagttgttaagtatgtcttg
gaaggccatgaccgtggggtcaactgggctgcatttcatcccaccctgcctctgattgtg
tcaggagctgatgatcgccaagtgaaactatggcggatgaatgatacgaaggcttgggaa
gtggacacactgagagggcacatgaataacgtttcatgtgttatgtttcatgccaaacag
gacataattgtatccaactcagaggacaaaagcatacgcgtgtgggatgtaacaaagaga
actggggttcagacattccgtcgggagcatgatcgattttggattcttgcatctcaccct
gagatgaatctgttggctgcaggtcatgacagtggtatgattgtcttcaagttggagaga
gaacgacccgcctttgcagtgagtggcgattctctgttctacaccaaagatcgcttttta
cgattctatgagttttcaactcagcgtgacacgcaagtgattccaattcgaaggcctggt
tctactagcctgaaccagagtcccagaactctttcttacagtccaactgaaaatgctgtt
cttatatgctcggatgttgatggtggatcttatgagttgtatgtcatacccaaagatagc
attgctaggggtgacagtctgcaagatgcaaagaaaggtgctggaggttcagccgtattt
gtggctcggaataggtttactgtgcttgacaagagcagtaatcaagtcttagtcaagaat
ctgaaaaatgagattgtgaaaaagagtggcctccccatagctgcggatgcagttttttat
gctggaacaggtaacttgctgtgtagggctgaggatagagtcattatatttgatcttcag
cagaggattgttcttggtgatcttcaaacccctttcatcaagtatgtcgtttggtctcat
gacatggagagtgttgctctactcagcaagcatgccattatcattgctaacaagaagctt
gtccaccagtgcactcttcacgaaacaatccgcgtaaagagtggtgcctgggatgataat
ggtgttttcatctacacgactctaaatcacataaaatactgtctgccaaatggagatagt
gggataatcagaactcttgatgtcccaatatacatcacaaaggtttctgggaatactatc
ttttgcttggaccgtgatggaaaaagcaggtctatagtcattgatgcgacggaatatatt
ttcaagctgtcccttttgaaaaagagatatgaccatgttatgagcatgataaggaactcg
cagctttgtggggaggctatgattgcttatctgcagcagaagggtttccccgatgtggct
ctccattttgtgaaagatgagagaacaaggttcaatttggctttagagagtgggaacatc
caaattgcagttgcgtcagctacagcaattgatgagaaagactactggtatagattggga
gtggaggctctccgccagggaaatgctggtattgtggaatatgcctaccagaggaccaag
aattttgaaagactatcttttctttatctcattactggtaataatgaaaagctgtctaag
atgctgaaaattgctgaagttaagaatgatgtcatgggtcaatttcataatgctctatat
ctaggtgatgtccgagaacgtgttaaaatcttggagaatgttggtcacttgccgcttgct
tacatcacagcttcggtccatggactacaggatgttgctgaacgtctagcagctgagttg
ggagataatgctcctgctttgccggagggaaaaacagcctccctcctgatgcctccccca
cctgttatctgcagtggcgattggccccttctgagagtaatgaaaggcatatttgaaggg
gggttggataatgttggtaggggagctgctgatgaagatgaagaggctgctgatggtgat
tggggtgaggagctggacgtggttgatgttgatggcttgcagaatggggatgtcactgca
attttggaggatggagaggtggctgaagagaatgaggaagagggaggatgggacctagaa
gatttggaactcccccctgaagcagacactccaaaggcatctgccaatgctcgctcttca
gtttttgtggccccaactcctggcatgcctgtaagccagatttggacccagaggtcgtca
cttgctgctgaacatgcagctgctggcaattttgatacagcaatgcggttgctgagcagg
caacttggaataaaaaactttgctccattgagacccatgtttcttgatcttcacactggc
agtcatacctatttgcgtgcattttcgtctgctccggtgatatctctggcagttgaaaga
ggatggaatgaatctgctagcccaaatgtcaggggtccacctgcacttgtgttcaatttc
tcccagttggaagagaagctcaaggcgggttacaaggccacgacggctggaaagttcact
gaggctcttcggctttttgttagcattcttcataccattcctcttgttgttgttgagtca
aggagggaagtcgatgaggtcaaggagttggtcattatagtgaaagagtatgttttgggt
ttgcaaatggagcttaagaggagggaaatcaaagacaatccagtacgccagcaagagctt
gctgcctatttcactcactgcaaccttcaactgcctcacttaaggcttgccttgcttaac
gcaatgactgtttgctacaagacaaagaatcttgccacagcagctaactttgccagacgg
cttctagagaccaatcccaccgttgagagccaagcaaagacagccaggcaagtgctgcag
gctgctgagaggaatatgaaagatgtttcccagttgaactatgatttcagaaacccgttt
gtgatatgtggagctacgtatgtcccaatttaccgaggacaaaaggatgtttcttgccca
ttctgtagttcacggtttgtgccaagccaggaagggcagctttgtaccgtttgtgacctt
gcagttgttggagcagatgcttctgggttgctttgttctccctctcagatacgatga
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integrated database retrieval system
