Carya illinoinensis (pecan): 122313410
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Entry
122313410 CDS
T08745
Name
(RefSeq) alpha-amylase 3, chloroplastic-like isoform X1
KO
K01176
alpha-amylase [EC:
3.2.1.1
]
Organism
cill
Carya illinoinensis (pecan)
Pathway
cill00500
Starch and sucrose metabolism
cill01100
Metabolic pathways
cill01110
Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:
cill00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00500 Starch and sucrose metabolism
122313410
Enzymes [BR:
cill01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.1 alpha-amylase
122313410
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Gene cluster
GFIT
Motif
Pfam:
Alpha-amyl_C2
Alpha-amylase
Glyco_hydro_70
Motif
Other DBs
NCBI-GeneID:
122313410
NCBI-ProteinID:
XP_042984320
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All DBs
Position
6:26827586..26836336
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AA seq
901 aa
AA seq
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MSTVSIEPLLHHYVRGGVKYGPKSKTFKPCYFNCSPNRKLLFHAPSFCNFRPSSFHALRA
SSSTDTALVETLESADVFFKETFPLNRVETVEGKIFIRLHRGQNNENMQLAVGCNLPGKW
ILHWGVSYLDDVGSEWDQPPAEMIPQGSIPIKDYAIETPLKKALSPDGDAFYEVMIDLIP
NSAIAAINFVLKDDETGAWYQHRGRDFKVPLVDYLQDDGNMVGAKRSLSMWPGAFGPLSN
LVLGAEVSHTNDSDGTNEFREPKQESRSLEGFYEQPIAKHVALENSVTVSVRKCTETAKS
LLYVETDLPGDVVIHWGVYRDDAKSWEIPSGPHPPETIFFRDKALRTRLQPKEGGDGCWG
SFTLEQGLEGFVFVLKLDEGTWLKCMGNDFYIPLPSSSSLLTKSRQDLSESAQIPDNNAE
PNEKASLSAYTDEIINDIRNLVSNISTEKSRKTKTKEAQESILQEIEKLAAEAYSIFRSS
IPTFSEEAVVKSVEPKPSAKICSGTGTGFEIMCQGFNWESHKSGRWYMELKERASKLSSL
GFTVIWLPPPTESISPEGYMPKDLYNLNSRYGNIDELKEVVKTFHDVGIKVLGDVVLNHR
CAHYKNQNGVWNIFGGRLNWDERAVVADDPHFQGRGNKSSGDNFHAAPNIDHSQDFVRRD
LIEWLCWLRKEIGYDGWRLDFVRGFWGGYVKDYLEASEPFFAVGEYWDSLSYTYGEMDHN
QDPHRQRIIDWINATNGTAGAFDVTTKGILHSALERCEYWRLSDQKGKPPGVLGWWPSRA
VTFIENHDTGSTQGHWRFPGGKEMQGYSYILTHPGTPTVFYDHIFSHHESEIAALISLRN
RNKIHCRSTVQITKAERDVYAAIIDENVAVKIGPGHYEPPSEPQRWSLAVEGKDYKVWET
S
NT seq
2706 nt
NT seq
+upstream
nt +downstream
nt
atgtcgaccgtgagcatagagcctctgctccaccactatgttcgtggtggcgttaagtac
ggtcccaaatccaagactttcaagccctgctattttaattgctctccgaatcgtaagctg
ctcttccatgccccgagcttctgcaacttcaggccttccagctttcacgctctcagagct
agctcttctaccgatacagctctcgtggagaccttggaatccgccgacgtcttctttaag
gagactttccctctgaaccgagtcgaaacggtggagggaaaaatcttcatcaggctacat
cgcgggcagaataatgagaatatgcagctcgctgtaggttgtaatcttcccgggaaatgg
attcttcactggggagtttcttatttggacgatgttggcagtgaatgggatcaacctcct
gctgaaatgataccacagggttcaattcccatcaaggactatgctatagagacaccttta
aagaaagcattatcaccggatggagatgctttttatgaagtgatgattgatcttatcccg
aacagtgcaatcgctgctataaattttgttttaaaggatgatgaaactggtgcttggtat
cagcacagaggaagagatttcaaggtgcctctagtagactaccttcaagatgatggcaat
atggtaggagcaaagaggagcctcagtatgtggccaggggcttttgggccgctatcaaac
ttggtccttggggcagaagtctcacacactaatgattcagacggcaccaatgaattcaga
gagcctaaacaagaaagtaggagcctagaaggtttctatgagcagcctattgcaaaacat
gtagctcttgagaactcagtcactgtttctgttagaaagtgcacagagacagctaaaagt
cttctgtatgtggaaaccgatctacctggagatgttgtcattcactggggagtttacaga
gatgatgctaaaagctgggaaatcccatccggcccacatccaccagaaacaatatttttt
agggacaaggctttgcggacacgattgcagccaaaagagggaggagatggatgttggggc
tcatttactctagaacaaggacttgaaggttttgtttttgtgctcaagctagatgagggc
acttggttgaaatgtatgggaaatgacttctacattcctctcccaagttctagtagcttg
cttactaaatccagacaggatctatctgaaagtgcacagatacctgacaataatgcagaa
ccaaatgaaaaagcatcccttagtgcatatactgatgaaataataaatgacataaggaac
ctggtaagcaacatttctactgagaagagtcgaaagaccaaaactaaagaagcacaagaa
agtattcttcaggaaattgaaaagcttgctgctgaggcctatagtatcttcaggagctca
attccaactttctcagaggaagctgttgttaaatctgtggaacctaaaccttcagccaaa
atatgctcagggacaggcacagggtttgaaataatgtgccaagggtttaactgggaatct
cataaatctggaagatggtacatggagctgaaagaaagagcttcaaaattatcttcactt
ggtttcactgtgatatggttaccaccgcctacagaatctatatcacccgaaggatacatg
ccaaaagatttatacaatttaaattccagatatggaaatattgatgagctgaaagaagtg
gtgaagacattccatgatgttggtattaaagttcttggagatgttgtcttgaatcatcgc
tgtgcacactataagaatcagaatggtgtttggaacatctttggtggccgtttaaattgg
gatgagcgtgcagtggttgcagatgatccgcattttcagggtagaggcaacaaaagtagt
ggagataatttccatgctgctccaaatattgatcattcccaagattttgtgaggagggat
ctcatagaatggttatgttggctgaggaaggaaattgggtacgatggatggaggcttgat
tttgtgaggggattttggggtggttatgtcaaagactacctggaggcaagtgaacctttc
tttgctgttggcgagtattgggattccctcagttatacatatggtgaaatggatcacaat
caagatccacatagacagagaattattgactggatcaatgcaactaatggaactgctggg
gcctttgatgtcaccaccaaagggattcttcattcagccctggaaagatgtgaatattgg
cgattatctgatcaaaagggaaaacctcctggggttcttgggtggtggccatcgcgtgct
gttacctttatagagaatcatgacactggttctactcagggtcactggagattcccaggt
ggaaaggagatgcaaggatattcttacatcctgactcatccaggaacacccacggtgttc
tatgaccacattttctctcaccacgaatctgaaattgcagctctgatatctctcagaaac
cggaataaaatccactgtcgcagtactgttcaaatcaccaaggcggaaagggatgtgtat
gcagccatcattgatgaaaatgttgcagtgaagataggaccaggtcattatgaaccccca
agtgagccccagagatggtctttagctgttgagggaaaagattacaaggtctgggaaaca
tcttga
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