Cebus imitator (Panamanian white-faced capuchin): 108283493
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Entry
108283493 CDS
T08783
Symbol
COL24A1
Name
(RefSeq) collagen alpha-1(XXIV) chain isoform X1
KO
K19721
collagen type V/XI/XXIV/XXVII, alpha
Organism
cimi
Cebus imitator (Panamanian white-faced capuchin)
Pathway
cimi04820
Cytoskeleton in muscle cells
cimi04974
Protein digestion and absorption
Brite
KEGG Orthology (KO) [BR:
cimi00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
108283493 (COL24A1)
09150 Organismal Systems
09154 Digestive system
04974 Protein digestion and absorption
108283493 (COL24A1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
cimi00536
]
108283493 (COL24A1)
Glycosaminoglycan binding proteins [BR:
cimi00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
108283493 (COL24A1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Collagen
COLFI
Laminin_G_2
Laminin_G_3
Motif
Other DBs
NCBI-GeneID:
108283493
NCBI-ProteinID:
XP_017355340
Ensembl:
ENSCCAG00000026567
LinkDB
All DBs
Position
Unknown
AA seq
1712 aa
AA seq
DB search
MHLGAHRTRHGKVSPTAKTKAFLHFIILCVAGVIHAQEQGIDILHQLGLGGKDVRHSSSV
TAVPSSSTPLPQGVHLTQLGVILKNDAYIESPLMKILPVNLGQPFTILTGLQSHRVNNAF
LFSIRNKNRLQLGVQLLPKKLVVHIGGKQPVVFNYSVHDEQWHSFAITVRNQVVSMFVEC
GKKYFSTEAISEVQSFDSNSVFTLGSINNNSVHFEGIVCQLDIIPSAEASADYCRYMKQQ
CRQADKHQPETSLPCTTLIPTKIPEHSPLPKRFAEKLLSEDSFTQDKSIPNIINNDSETV
YKRQEHPISRSQLSSLQSGNVSAVDLTNLGIQAKEMITEEDTQTNLSLSVTPHRLSEAKM
NTKKKFNSLLNVPGNMTQHDGRATGLSLFKKMPSIPQIKQDTMTNLKKAITANLHTNELT
EMEQILNTTLFRETNEPSVDNHLDKRKKGEFYPEAPYPIENSYETELYDYYYYEDLNTML
EMEYLRGPKGDTGPPGPPGPAGIPGPSGKRGPRGIPGPHGNPGLPGLPGPKGPKGDPGFS
PGQAIPGEKGDQGLFGLIGPPGMRGDKGLKGHPGLPGLRGEQGIPGLAGNIGSPGYPGRQ
GLAGPEGNPGPKGVRGFIGSPGEAGQLGPEGERGIPGIRGKKGFKGRQGFPGDFGDRGPA
GLDGSPGLVGGIGPLGFPGLRGSVGPVGPIGPPGIPGPVGLSGNKGLPGIKGDKGEQGTA
GELGEPGYPGDKGAVGLPGPPGMRGKPGPSGQTGDPGLQGPSGPPGPEGFPGDIGIPGQN
GPEGPKGLLGNRGPPGPPGLKGTQGEEGPIGPFGELGPRGKPGQKGYAGEPGPEGLKGEV
GDQGNIGKIGETGPVGLPGEVGMTGSIGEKGERGSPGPLGLQGEKGVMGYPGPPGVPGPI
GPLGLPGHVGARGPPGSQGPKGQRGPRGPDGLLGEQGIQGAKGEKGVQGKRGSHGLTGKT
GNPGERGVQGKPGLQGLPGSTGGRGLAGEPGLRGLQGDVGPPGEMGVEGPPGIEGESGLQ
GEPGAKGDTGPAGSVGGTGEPGLWGEPGAPGEEGLQGKDGLKGVPGGRGIPGENGEKGEM
GLPGIIGPLGRSGQMGLPGPEGIVGIPGQRGRPGKKGDKGQVGPVGEVGSKGFPGKIGKS
GPKGARGTRGALGHLGLMGPEGDPGIPGYRGHQGQPGLPGLPGPKGEKGYPGEDSTVLGP
PGPRGEPGPVGEQGERGEPGAEGFKGHVGVPGLRGATGQQGPPGEPGDQGEQGLKGERGS
EGHKGKKGAPGPSGKPGIPGLQGPPGPKGIQGYHGGDGISGNPGKVGSPGKQGLPGIRGS
PGRTGLAGAPGLPGVKGSSGLPGNPGVQGPKGEQGLHGQPGIQGKRGRRGAQGDQGPCGE
PGLKGQPGEYGVQGLTGFQGFPGPKGPEGDAGIVGISGPKGPIGQRGNTGPLGREGIIGP
TGRIGPRGEKGFRGETGPQGPRGQPGPPGPPGAPGPRKQMDINAAIQALIESNTALQMES
YQNTEVTLIDHSEEIFKTLNYLSNLLHSIKNPLGTRDNPARICKDLLNCEQKVSDGKYWI
DPNLGCPSDAIEVFCNFSAGGQTCLPPVSVTKLEFGVGKVQMNFLHLLSSEATHIITIHC
LNTPRWTSTQTSGPGLPIGFKGWNGQIFKVGTLLEPKVLSDDCKIQDGSWHKATFLFNTQ
EPNQLPVIEVQKLSHLKTERKYYIESSSVCFL
NT seq
5139 nt
NT seq
+upstream
nt +downstream
nt
atgcatttaggagcccacaggacaaggcatggaaaagtctcccccacggcaaaaacgaaa
gcatttcttcattttatcatactatgtgtggctggcgttattcatgcacaagaacaaggc
atagatattcttcatcaactaggccttggaggcaaagatgtaagacactcatcatcagtg
actgctgtaccatcatcatctacaccattacctcagggggtccatttaacacaattaggt
gtcattttaaaaaatgatgcttatatcgagtctcctctcatgaaaattttaccagtcaac
ttagggcagccgtttacaatattaactgggttacagtcacatcgggtgaacaatgcattt
ctcttcagcattagaaataaaaatagactgcaactaggagtacagttactacctaaaaaa
ttagtagtacacattggaggaaagcagcctgtagttttcaactacagtgttcatgatgag
caatggcactcatttgccattactgttagaaatcaagttgtctcaatgtttgttgagtgt
ggaaagaaatattttagcacagaggctatttcagaagttcagagctttgattctaatagt
gtatttaccttaggaagtataaataataattctgtccattttgaaggaatagtatgtcag
ttagatattattccttctgcagaagcatctgcagactactgcagatatatgaaacaacag
tgtcgccaagcagacaaacaccaacctgaaacaagccttccttgcacaactctcatacca
actaagataccagaacattctcccctgcccaaacgatttgctgaaaaattactgtcagag
gattcatttactcaagacaaaagcattccaaatatcataaataatgattctgaaacagtg
tataagagacaagaacacccaatatcaagatcgcagttatcttctcttcagtcaggaaat
gtctctgctgtggatctcacaaaccttgggattcaggccaaagaaatgatcactgaggaa
gatactcagacaaatttaagcctgtcagtgacccctcatcgcctcagtgaggcaaaaatg
aataccaagaagaaatttaattctctcctaaacgtacctggcaatatgacgcaacatgat
ggtagagcaactggtctctcactgtttaagaagatgccatctattccacaaataaaacaa
gatacaatgactaatctcaagaaggctatcacagcaaatctgcacactaatgaactcaca
gaaatggaacagattttaaacacaaccttgtttagagagacaaatgagccatctgtggat
aatcaccttgataaaaggaaaaaaggtgaattttatcctgaagctccgtatcccatagaa
aatagctatgaaactgagctttatgattattattattatgaggatctaaatacaatgctc
gaaatggagtatctgagagggccaaaaggagacactggacctcccggtccgcccggtcca
gcaggtatcccaggtccgtcagggaagagaggtccacggggcataccagggccacatggg
aatcctgggttacctggattacctggtccaaagggtcccaaaggagatccaggattttcc
ccaggtcaagccattcctggagaaaagggtgatcaaggcctttttggattaataggcccc
cctggtatgcgaggtgataagggtctcaaaggacatcctggactcccaggacttcgaggt
gaacaaggaattccaggattggctggtaatattggttcacccggttaccctggcaggcag
ggtttagctggaccagaaggtaatccaggtcctaaaggcgtacgaggttttattggctct
cctggagaagcaggacagctgggacctgaaggtgaaaggggcattcctgggatccgtgga
aagaaaggttttaaggggagacagggctttccaggtgactttggagacagaggccctgct
ggtcttgatggcagtcctggacttgtaggtggcattggtcctctggggtttcctgggctt
agaggcagtgttggccctgtgggaccaattggacctcctggaattcctggcccagtgggc
ctttcagggaataaaggactacctggaatcaaaggtgataagggtgaacaaggcactgca
ggagagctaggagaaccagggtatcctggagataagggtgctgttggtttgccaggacca
ccagggatgagaggaaagccaggaccttcaggccaaacaggtgacccaggactccaagga
ccatctggacctccaggaccagagggttttccaggagatattgggattcctggacaaaac
ggccccgaaggaccaaagggactccttggaaatagagggcctcctggacctcctggcctc
aaaggaactcagggagaagaaggaccaattggaccctttggggaactggggccaagagga
aaaccaggtcaaaaggggtatgcaggtgaaccaggaccagaaggcttaaagggagaagta
ggagatcaaggaaatattggaaaaattggcgaaacaggacctgttggcttacctggagaa
gttgggatgactggaagcattggtgaaaagggagaacgtggaagtccaggcccactaggt
ctccagggggaaaagggtgttatgggatatccaggtcctcctggggttccaggacctatt
ggtccattgggattacctggtcatgtgggggcaagaggaccacctgggagtcaaggtcct
aaaggacaaagaggaccaagaggaccagatggtctcttaggagagcaaggtatacagggt
gccaagggtgaaaaaggagttcaaggaaaaagagggtctcatggtcttactggtaagact
ggaaaccctggagaaagaggagttcaagggaaaccaggtttacagggactgcctggaagt
acaggtggcagaggacttgcaggagaaccaggactgcgaggactgcaaggtgatgttgga
cctcctggagaaatgggcgttgagggacctccaggcattgagggagagtctggtctgcaa
ggcgagccaggtgcaaagggagatactggacctgcaggcagtgttggaggaactggggaa
ccagggttatggggtgagccaggagctcctggagaagaaggtctccaaggaaaagatggg
ttaaagggagttccaggaggaaggggaattcctggagagaatggagaaaaaggagagatg
ggcttaccaggaattatagggcccttgggtagatcaggccaaatgggccttccggggcct
gaaggaattgtggggattccagggcaaagaggtcgtccagggaaaaagggtgataaggga
caagtaggacccgtgggagaagttggaagcaaaggtttccctggaaaaattgggaaaagt
ggtcctaagggtgccagaggaacaagaggtgctctgggacatttaggattgatgggacct
gagggagacccaggaattccagggtacaggggccatcagggtcaaccaggactccctgga
ttgccaggacctaaaggagaaaagggctacccaggagaagatagcacagtcctaggacca
cctggacctcgaggtgaaccaggtccagtcggggaacaaggagagagaggagagcctgga
gcagagggatttaagggacatgtgggtgtgccaggactaagaggtgccactggacaacaa
ggacccccaggcgagccaggtgaccagggtgaacaaggactaaaaggagagagaggatct
gaaggtcataaggggaaaaaaggagctcctggtccttctggaaaacctggaattcctgga
cttcaaggcccacctggaccaaaaggcatacaaggataccatggaggagatggcatttca
ggaaaccctggaaaagttgggtcaccaggaaaacagggacttcctggcatcagaggcagc
ccaggaagaacaggccttgccggagctccaggtcttccaggagtaaagggttcatcaggc
ttgccaggaaacccaggagttcaaggcccaaagggtgaacaagggctacatggtcaacct
ggaattcaaggtaaaagaggtcgccgaggagcacaaggtgatcaaggaccatgtggagag
cctggcctgaaagggcagcctggagaatatggtgttcaaggtttgacaggtttccaagga
ttcccaggccctaaaggtcctgaaggggatgctggcattgttggaatatcaggccctaaa
ggtcctattggacagagaggaaacactggtcctcttggaagagaaggtataataggccca
acaggtcgaattggacccagaggtgaaaagggctttagaggtgaaactggtcctcaagga
ccgagaggtcaaccagggcctccaggcccacctggagcaccaggcccaagaaaacaaatg
gatatcaatgctgctattcaagccttgattgaatcaaatactgccctacagatggagagc
taccagaatactgaagtgactttaattgaccacagcgaagagatattcaaaaccctcaac
taccttagcaatttactgcacagcatcaagaatcctcttggcacacgagataacccagca
cgaatctgcaaagatttactgaactgtgaacaaaaagtatcagatggaaaatactggatt
gatccaaatcttggctgtccttcagatgccattgaggttttctgcaatttcagtgctggt
ggccagacatgcttacctcccgtttctgtaacaaagttggagtttggagttggcaaagtc
cagatgaacttccttcatttactgagttcagaagccacccatatcatcaccattcactgt
ctaaacaccccgaggtggacaagcacacaaacaagtggcccaggattgcctattggtttc
aagggatggaatggccagatttttaaagtaggcactctacttgaacctaaagtgctttca
gatgactgcaagattcaagatggcagctggcataaggcaacatttctttttaacacccag
gaacctaatcaacttccagtgattgaagtacaaaaactttctcatctcaaaactgaacga
aagtattacattgaaagcagttctgtatgctttctgtaa
DBGET
integrated database retrieval system
