Cebus imitator (Panamanian white-faced capuchin): 108284164
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Entry
108284164 CDS
T08783
Symbol
COL17A1
Name
(RefSeq) collagen alpha-1(XVII) chain
KO
K07603
collagen type XVII alpha
Organism
cimi
Cebus imitator (Panamanian white-faced capuchin)
Pathway
cimi04974
Protein digestion and absorption
Brite
KEGG Orthology (KO) [BR:
cimi00001
]
09150 Organismal Systems
09154 Digestive system
04974 Protein digestion and absorption
108284164 (COL17A1)
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Motif
Pfam:
Collagen
DUF2868
Motif
Other DBs
NCBI-GeneID:
108284164
NCBI-ProteinID:
XP_017356310
Ensembl:
ENSCCAG00000018668
LinkDB
All DBs
Position
Unknown
AA seq
1412 aa
AA seq
DB search
MDAIKKNKRDGTEVTERIVTETVTTRLTSLPPKGGTSNGYAKTGSLGGGSRLEKQSLTHG
SSGYINSSGSTRGHGSTSSYRRAHSPASTLPNSPGSTFERKTHITRHAYEGSSSGNSSPE
YPRKEFASSSTRGRSQTRESEIRVRLQSASPSTRWTELDDVKRLLKGSRSASVSPTRNSS
NTLPIPKKGTVETKIVTASSQSVSGTYDATILDANLPSHVWSSTLPAGSSMGTYHNNMTT
QSSSLLNTNAYSAGSVFGVPNNMASCSPTLHPGLSTSSSVFGMQNNLAPSSTTLSHGTTT
TSTAYGVKKNMPQSPAAVNTGVSTSAACTTSMQNDDLLPKDCKFLILEKDNTPAKKEMEL
LIMTKDSGKVFTASPASITTTSFSEDTLKKEKQAAYNADSGLKAEANGDLKTVSTKGKTS
TADIHSYGSGGGGGHGRGGGVGGAGGGPWGAAPAWCPCRSCCSWWKWLLGLLLTWLLLLG
LLFGLIALAEEVRRLKARVDELERIRNSKLSYVDRLVRDSKDGLQGIAPAVGADLDKIGL
DSESQEALWLFVRKKLMTEQENGNLRGSPGPKGDMGSQGPKGDRGFPGTPGIPGPLGHPG
PEGPKGQKGSVGDPGMEGPMGQRGREGPMGPRGEPGPPGFGEKGETGAAGEPGPHGPPGV
PGSVGPKGSSGSPGPQGPPGPVGLQGLQGEVGLPGVKGDKGPMGPPGPKGDQGEKGPRGL
TGEPGMRGLPGAVGEPGAKGAMGPAGPDGHQGPRGEQGLTGMPGIRGPPGPSGNPGKPGL
TGPQGPQGLPGTPGQPGIKGEPGAPGKIVTSEGSSTLTVPGPPGPPGAMGPPGPPGAPGP
AGPAGLPGQQGPPGPRGHQGEQGLPGVSTSGSGSLGLNLQGPPGPPGPQGPKGDKGDPGV
PGAPGIPGGPSGGASSSTMYVPGPPGPPGPPGLPGSISSSGREIQQYISEYMQSDSIRSY
LSGVQGPPGPPGPPGPVTTITGETFDYSRLASQVVSYLQTSGYSINLSSSSSISSEDILA
VLQRDDVRQYLRQYLMGPRGPPGPPGASGDGSLLSLDYAKLSSHILSYMSSSGISIGLPG
PPGPPGLPGTSYEELLSLLRGSEFRGIIGPPGPPGPPGIPGNVWSSISVEDLSSYLQTAG
LSSIPGPPGPPGPPGPRGPPGVSGALATYAAENSDSFRSELISYLTSPDVRSFIVGPPGP
PGPQGPPGDSRHLSTDASHSRSRSSSSHSSSIRRGSSYSSSTGTGGAAAGDGGPYGTDIG
LGGGYGAEGSMYGGNGGPFGADFAGGLDYNKLAVRVSESMQRQGLLQGMAYTVQGPPGQP
GPQGPPGISKVFSAYSNVTADLMDFFRTYGAIQGPPGQKGEMGTPGPKGDRGPAGPPGHP
GPPGPRGHKGEKGDKGDQVYVGRRRRSVAVKP
NT seq
4239 nt
NT seq
+upstream
nt +downstream
nt
atggatgcaatcaagaaaaacaaacgagatggtactgaagtcactgaaagaattgtcact
gaaacagtaaccacaagacttacatccttaccaccaaaaggcgggaccagcaatggctat
gctaaaacaggctctcttggcggagggagccgtctggagaaacaaagcctgactcatggc
agcagcggctacataaactcaagtggaagcacacgaggccatggctccacctctagttac
aggagggctcactcacctgcctccactctgccgaactccccaggctcaacctttgaaagg
aaaactcacattacccgccatgcatacgaagggagctccagtggcaactcttctccggag
taccctcggaaggaatttgcctcttcttcaaccagaggacggagtcaaacacgagagagt
gaaattcgagttcgactgcagagtgcatccccatctacccgatggacagaattggatgat
gttaagcgtttgctcaaggggagtcgatcagcaagtgtgagccccacccggaattcctcc
aacacactccccatccctaagaaaggcactgtggagaccaaaattgtgacagcgagctcc
cagtcagtgtcaggcacctacgatgcaacgatcctggatgccaaccttccctcccatgtg
tggtcctccaccttgcccgcagggtcctccatggggacctatcacaacaacatgacaaca
cagagctcgtccctcctcaacaccaatgcctactctgcaggatcagtctttggagttcca
aataacatggcatcctgctcacccactttgcaccctggactcagtacatcctcctcagta
tttggcatgcagaacaatctggcccccagctcgactaccctgtcccatggcaccaccact
acttccacagcatatggggtgaagaaaaacatgccccagagccctgcggctgtgaacact
ggcgtttccacctctgctgcctgcaccacaagcatgcagaatgatgaccttttgcccaag
gactgcaagttcctgatcctagagaaagacaacacacctgccaagaaggagatggagctg
ctgatcatgaccaaggacagtgggaaggtctttacggcctcaccagccagcatcactaca
acttctttttcagaagacaccctaaaaaaagaaaagcaagctgcctacaatgctgactca
ggcctaaaagctgaagctaatggagacctgaagactgtgtccacaaagggcaagaccagc
actgcagatatccacagctacggcagcggaggtggtggtggccacggaagaggtggcggt
gttggtggcgctggtggcggcccatggggagcggcgccagcctggtgcccctgcagatcc
tgctgcagctggtggaagtggctcctgggcctgctgctcacctggctgctgctcctgggg
ctgctcttcggcctcattgctctggcggaggaggtgagaaggctgaaggcccgtgtggac
gagctggagaggatcaggaacagcaagctgtcctacgtggataggctggtgagagacagc
aaggacggcctccagggcatagcacctgcagtaggagcagatctggacaaaattggcctg
gacagcgaaagccaggaggcgctctggttgttcgtgaggaaaaaactgatgacagaacag
gaaaatggaaatctccgaggaagccctggccctaaaggtgacatgggaagccaaggccct
aaaggagatcgagggttccctggcactccaggtatccctgggcccttgggccacccaggt
ccagaaggaccaaagggtcaaaaaggcagcgtgggagatcccggcatggaaggccccatg
ggccagagagggcgagaaggccccatgggacctcgcggtgagccagggcctcctgggttt
ggagagaaaggggaaacaggggctgctggtgaaccaggtcctcacggcccacctggtgtc
ccaggttctgtgggtcccaaaggttccagcggctctcctggcccacagggacccccaggt
cctgtaggtctccaagggctccaaggtgaagtgggacttcctggtgtcaaaggtgacaaa
ggaccgatgggaccaccaggacctaaaggtgaccagggtgagaaaggacctcgaggtctc
acaggcgagcctggcatgagaggtttgcctggtgctgttggtgagcctggagctaaaggg
gcaatgggtcctgctggcccagatggacaccaaggcccaagaggtgaacaaggtcttaca
gggatgcctggaatccgtggcccaccaggaccttctggaaacccaggaaagccaggtctc
acaggaccccagggacctcagggacttcctggtacccccggtcaaccaggaataaaaggt
gaaccaggagctccaggcaagatcgtgacttcagaggggtcatcgacgctcaccgtccca
ggccccccaggacctcctggagccatgggacccccaggacctccaggtgccccaggccct
gctggcccagctggtctcccaggacagcaaggtcctccaggccccagaggacaccaaggc
gagcaaggcctcccaggtgtctcaacctcagggtctggttctctcggactcaaccttcag
ggaccaccaggcccacctggcccccagggacccaaaggtgacaaaggtgatccaggtgtc
ccaggggctcctggcattcctggtggtccttctggaggggcatcatcaagcaccatgtac
gtgccaggcccgccaggtccccctgggccccctgggcttccaggctccatcagcagctct
ggccgggagattcagcagtacatctctgagtacatgcagagtgacagtattaggtcttac
ctatctggagttcagggcccgccaggcccacctggtcccccaggacctgtcaccaccatc
acaggcgagactttcgactattcaaggctggcgagccaagttgtgagctacttgcagact
tcggggtacagcatcaacttgtcctcctcgtcctccatctcttctgaagacatcctggct
gtgctgcagcgggatgatgtgcgtcagtacctacgtcagtacctgatgggccctcggggt
ccaccggggccacctggagccagtggagatgggtcccttctgtctttggactatgcaaag
ctgagtagtcacattctcagctacatgtcgagttctgggatcagcattgggcttcctggt
cccccagggccacctggcttgccgggaacctcctatgaggagctcctctccttgctacga
ggatctgaattcagagggatcattggacccccaggtcccccggggccaccagggatccca
ggcaatgtgtggtccagcatcagcgtggaggacctgtcctcttacttacaaaccgccggc
ttgtcatccatcccaggtcctccaggcccacctggtcctccaggtcctcgagggccccct
ggtgtctcaggagctctggcaacctacgcagctgaaaacagcgacagtttccggagtgag
ctgatcagctacctcacaagtcctgatgtgcgcagcttcattgttggccccccaggccct
cctgggccacagggaccccctggggacagccgccacctgtccacggatgcctcccacagt
cgaagcagaagctcctcctcacacagctcgtccatcaggcggggcagctcctacagctct
tccacgggcacagggggtgcagctgcaggagacggggggccctatggcactgacatcggc
ctaggtggaggctatggggcagaaggcagcatgtatggtggcaatggcggaccattcggg
gctgactttgctggaggtctggattacaataagctggctgtgcgggtatcagagagcatg
cagcgtcagggcctactgcaagggatggcctacactgtccagggcccaccaggccagccg
gggccccaggggccacctggcatcagcaaggtcttctctgcctacagcaatgtgactgca
gacctcatggacttcttccgaacttatggagccattcaaggaccccctgggcaaaaagga
gagatgggcactccaggacccaaaggtgacaggggccctgctggaccaccaggtcatcct
gggccacctggtcctcgagggcacaagggagaaaaaggagacaaaggtgaccaagtctat
gttgggcggagaaggagaagtgttgctgtcaagccgtga
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