Cebus imitator (Panamanian white-faced capuchin): 108300628
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Entry
108300628 CDS
T08783
Symbol
VPS11
Name
(RefSeq) vacuolar protein sorting-associated protein 11 homolog isoform X1
KO
K20179
vacuolar protein sorting-associated protein 11
Organism
cimi
Cebus imitator (Panamanian white-faced capuchin)
Pathway
cimi04140
Autophagy - animal
cimi04148
Efferocytosis
cimi05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
cimi00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
108300628 (VPS11)
04148 Efferocytosis
108300628 (VPS11)
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
108300628 (VPS11)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cimi04131
]
108300628 (VPS11)
Membrane trafficking [BR:
cimi04131
]
Endosome - Lysosome transport
Tethering complex
CORVET complex
108300628 (VPS11)
Hops complex
108300628 (VPS11)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
VPS11_C
Clathrin
zf-C3HC4_2
zf-RING_2
zf-C3HC4
zf-rbx1
zf-C3H2C3
zf-RING_UBOX
zf-RING_5
TPR_11
DLP_helical
zf-RING_11
zf-HC5HC2H
zf-C3HC4_3
zf-ANAPC11
zf-RING-like
DUF5847
Motif
Other DBs
NCBI-GeneID:
108300628
NCBI-ProteinID:
XP_017378985
Ensembl:
ENSCCAG00000037650
LinkDB
All DBs
Position
Unknown
AA seq
945 aa
AA seq
DB search
MAAYLQWRRFVFFDKELVKEPLGNDGAAPGAAPASGSAASKFLCLPPGITVCDSGRGSLV
FGDMEGQIWFLPRSLQLTGFQAYKLRVTHLYQLKQHNILASVGEDEEGINPLVCPQVKIW
NLEKRDGGNPLCTRIFPAIPGTEPTVVSCLTVHENLNFMAIGFTDGSVTLNKGDITRDRH
SKTQILHKGNYPVTGLAFRQAGKTTHLFVVTTENVQSYIVSGKDYPRVELDTHGCGLRCS
ALSDPSQDLQFIVAGDECVYLYQPDERGPCFAFEGHKLIAHWFRGYLVIVSRDRKVSPKS
EFTSRDSQSSDKQILNIYDLCNKFIAYSAVFEDVVDVLAEWGSLYVLTRDGRVHALQEKD
TQTKLEMLFKKNLFEMAINLAKSQHLDSDGLAQIFMQYGDHLYSKGNHDGAVQQYIRTIG
KLEPSYVIRKFLDAQRIHNLTAYLQTLHRQSLANADHTTLLLNCYTKLKDSSKLEEFIKT
KSESEVHFDVETAIKVLRQAGYYSHALYLAENHAHHEWYLKIQLEDIKNYQEALRYIGKL
PFEQAESNMKRYGKILMHHIPEQTTQLLKGLCTDYRSSLEGRCNRETPGCRANSEEFIPI
FANNPRELKAFLEHMSEVQPDSPQGIYDTLLELRLQNWAHEKDPQVKEKLHSEAISLLKS
GRFCDVFDKALVLCQMHDFQDGVLYLYEQGKLFQQIMHYHMQHEQYRQVITVCERHGEQD
PSLWEQALSYFARKEEDCKEYVAAVLKHIENKNLMPPLLVVQTLAHNSTATLSVIRDYLV
QKLQKQSQQIAQDELRVRRYREETTRIRQEIQELKASPKIFQKTKCSICNSALELPSVHF
LCGHSFHQHCFESYSESDADCPTCLPENRKVMDMIRAQEQKRDLHDQFQHQLKCSNDSFS
VIADYFGRGVFNKLTLLTDPPTARLTPSLEAGLQRDLLMHSRRGT
NT seq
2838 nt
NT seq
+upstream
nt +downstream
nt
atggcagcctacctgcagtggcggcgctttgtctttttcgacaaggagctggtgaaggag
ccgctgggcaatgatggggctgctcccggggccgcacctgcttctggatccgctgcttcc
aagttcctttgcctccctcctggcatcactgtctgcgactcaggccgagggagcctggtc
tttggagatatggaaggccagatctggttcttgccacgttccctacagcttacaggcttc
caggcctataaactacgggtgacacacctgtaccaactgaagcaacacaatattctggca
tctgttggagaagatgaagagggcatcaaccctttggtctgtccacaggttaagatctgg
aacctggagaagagagatggcggcaatccactctgcactcgaatcttccctgctattcca
ggaacagagccaactgttgtatcttgtttgactgtccatgaaaatctcaactttatggcc
attggtttcacagatggcagtgttactttgaacaaaggagatatcacccgggaccggcat
agcaagacccagattttgcacaagggcaactatcctgttactggattggcctttcgccaa
gcaggaaagaccactcacttgtttgttgtgacaacagagaatgtgcagtcctatatagtt
tctggaaaagactaccctcgcgtggagttggacacccatgggtgtggcctgcgctgctca
gccctaagtgacccttctcaggacctgcagttcattgtggccggggatgagtgtgtctac
ttgtaccagcctgatgaacgtgggccctgcttcgcctttgagggccataagctcattgcc
cactggtttaggggctaccttgtcattgtctcccgtgaccgaaaggtttctcccaagtca
gagtttaccagcagggactcacagagctccgacaagcagattctaaacatctatgacctg
tgcaacaagttcatagcctatagcgctgtctttgaggatgtagtggatgtgcttgctgag
tggggctccctgtatgtgctgacgcgggatgggcgggtccacgcactgcaggagaaggac
acacagaccaaactggagatgctgtttaagaagaacctatttgagatggcaattaacctg
gccaagagccaacatctggacagtgatgggctggcccagattttcatgcagtatggagac
catctctacagcaagggcaaccacgatggggctgtccagcagtatatccgaaccattgga
aagttggagccatcctatgtgatccgcaagtttctagatgcccagcgcattcacaacctg
actgcctatctgcagaccctgcaccgacaatccctggccaatgctgaccataccaccctg
ctcctcaactgctataccaagctcaaggacagctcgaagctggaggagttcatcaagaca
aagagtgagagcgaagtccactttgacgtggagacagccatcaaggttctccggcaggct
ggctactactcccatgccctgtatctggcagagaaccatgcacaccatgagtggtacctg
aagatccagctagaggacattaagaattatcaggaagcccttcggtacatcggcaagctg
ccttttgagcaggcagagagcaacatgaagcgctatggcaagatcctcatgcaccacata
ccagagcagacaactcagctgctgaagggactttgtaccgattatcggtccagccttgaa
ggccgctgcaatagggagacccctggatgcagggccaactctgaggagttcatccccatc
tttgccaataacccgcgagagctgaaagccttcctagagcacatgagcgaagtgcagcca
gactcaccccagggcatctacgatacactccttgagctgcgactgcagaactgggcccat
gagaaggatccacaggtcaaagagaagcttcactcagaggccatttccctgctgaagagt
ggtcgcttctgcgacgtctttgacaaggccctggtcctatgccagatgcacgactttcaa
gatggtgtcctttacctctatgagcaggggaagctgttccagcagatcatgcactaccac
atgcagcacgagcagtaccggcaggtcatcaccgtatgtgagcgccacggggagcaggac
ccctccttgtgggagcaggccctcagctactttgctcgcaaggaggaggactgcaaggag
tacgtggcagctgtcctcaagcatatcgagaacaagaacctcatgccacctcttctagtg
gtgcagaccctggcccacaactccacagccacactgtccgtcatcagggactatctggtc
caaaaactacagaaacagagccagcagattgcacaggatgagctgcgggtacggcggtac
cgggaggagaccacccgcatccgccaggagatccaggagctcaaggccagtcctaagatt
ttccaaaagaccaagtgcagcatctgtaacagtgccttggagttgccctcagtccacttc
ctgtgtggccactccttccaccaacactgctttgagagttactctgaaagtgatgctgat
tgccccacctgcctccctgaaaatcggaaggtcatggatatgatccgggcccaggaacag
aaacgagatctccatgatcaattccagcatcagctcaagtgctccaatgacagcttctcc
gtgattgctgactactttggcagaggtgttttcaacaaattgactctgctgaccgaccct
cccacagccagactgacccctagcctagaggctgggctgcagcgtgacctcctcatgcac
tccaggaggggcacttaa
DBGET
integrated database retrieval system
