Cebus imitator (Panamanian white-faced capuchin): 108304799
Help
Entry
108304799 CDS
T08783
Name
(RefSeq) collagen alpha-3(IV) chain isoform X1
KO
K06237
collagen type IV alpha
Organism
cimi
Cebus imitator (Panamanian white-faced capuchin)
Pathway
cimi04151
PI3K-Akt signaling pathway
cimi04510
Focal adhesion
cimi04512
ECM-receptor interaction
cimi04820
Cytoskeleton in muscle cells
cimi04926
Relaxin signaling pathway
cimi04933
AGE-RAGE signaling pathway in diabetic complications
cimi04974
Protein digestion and absorption
cimi05146
Amoebiasis
cimi05165
Human papillomavirus infection
cimi05200
Pathways in cancer
cimi05222
Small cell lung cancer
Brite
KEGG Orthology (KO) [BR:
cimi00001
]
09130 Environmental Information Processing
09132 Signal transduction
04151 PI3K-Akt signaling pathway
108304799
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
108304799
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
108304799
09142 Cell motility
04820 Cytoskeleton in muscle cells
108304799
09150 Organismal Systems
09152 Endocrine system
04926 Relaxin signaling pathway
108304799
09154 Digestive system
04974 Protein digestion and absorption
108304799
09160 Human Diseases
09161 Cancer: overview
05200 Pathways in cancer
108304799
09162 Cancer: specific types
05222 Small cell lung cancer
108304799
09172 Infectious disease: viral
05165 Human papillomavirus infection
108304799
09174 Infectious disease: parasitic
05146 Amoebiasis
108304799
09167 Endocrine and metabolic disease
04933 AGE-RAGE signaling pathway in diabetic complications
108304799
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
cimi04147
]
108304799
00536 Glycosaminoglycan binding proteins [BR:
cimi00536
]
108304799
Exosome [BR:
cimi04147
]
Exosomal proteins
Exosomal proteins of other cancer cells
108304799
Glycosaminoglycan binding proteins [BR:
cimi00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
108304799
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Collagen
C4
Motif
Other DBs
NCBI-GeneID:
108304799
NCBI-ProteinID:
XP_017384599
Ensembl:
ENSCCAG00000037014
LinkDB
All DBs
Position
Unknown
AA seq
1666 aa
AA seq
DB search
MSPRMALRPQVLLLVLLAGAGAAGKGCICKDKGQCFCEGAKGQKGEKGFPGPPGSPGQKG
FTGPEGLPGLQGPKGSPGLPGLTGAKGVRGITGLPGFSGSPGLPGTPGNTGLYGLAGVPG
CNGSKGEQGFPGLPGTPGYPGIPGPAGLKGQKGAPAKGDDIELDAKGDPGLPGAPGPQGL
PGPPGFPGPVGPPGPPGFFGFPGAMGPRGPKGHMGDRVIGQKGEQGVKGLTGPPGPPGTV
SVTLTGPDNRTNLKGEKGDKGVMGKPGPPGPSGLPGESYGSEKGAPGEPGPQGKPGKDGV
PGFPGSEGVKGNRGFPGLTGEDGIKGQKGDIGPPGFRGPTEYYDIYQEKGDKGIPGPPGP
KGARGPQGPSGPPGVPGSPGPSRPGLRGVPGWPGLKGSKGERGPPGKDAMGTPGSPGCPG
SPGPTGSPGPPGPPGDIVFRKGPPGDRGLPGYLGSPGILGAEGPKGEPGLLCTQCPYIPG
PPGLPGLPGLHGVKGIPGRQGAAGLKGSPGSPGNTGLPGFPGFPGAQGDPGLKGEKGETL
QPKGQVGAPGDPGLRGQPGRKGLDGIPGTPGVKGLPGPKGELALSGEKGDQGPPGDPGSP
GFPGPAGPAGPPGYGPQGKPGPKGTQGVPGAPGPPGEAGPRGEVSVSTPVPGPPGPPGAP
GLAGPQGPPGIPGSMGKYGDPGLPGPDGEPGIPGIGFPGPPGPKGDQGFPGTKGSLGCPG
KMGEPGLPGKPGLPGVKGEPALAMPGGPGTPGFPGERGNSGEHGEIGLPGLPGLPGTPGN
EGLDGPRGDPGQPGPPGEQGPQGRCIEGPRGAQGLPGLNGLKGQQGRRGKTGPKGDPGIP
GLDRSGFPGETGSPGRPGHQGEVGPPGQKGYPGNPGILGPRGEDGMVGMMGFPGATGSPG
PPGNPGMPGQRGSLGIPGVKGQRGTPGAKGEQGDKGNPGPSQISHLIGDKGEPGLKGYAG
NMGEKGNRGVPGLPGLKGLQGLPGPPGPPGPRGDLGSIGNPGEPGPRGVPGSMGNMGMPG
SKGKRGTLGFPGRAGRPGLPGIHGLQGDKGEPGYSEGTRPGPPGPTGDPGLPGDMGKKGE
MGQPGPPGHSGPAGPEGVIGSPGSPGLPGKPGPHGDLGFKGIKGFPGPPGIKGPPGLPGF
PGSPGPIGIRGDQGRDGIPGPAGEKGETGLLGAPPGPRGSPGAPGAKGDRGAPGLPGLPG
RKGAMGDAGPRGPTGIEGFPGPPGLPGAIIPSQKGNRGPPGSRGSPGEPGPPGPPGSHVK
GIKGDKGSMGHPGPKGPPGTVGDMGPPGHPGAPGTPGLPGLRGDPGFQGFPGVKGEKGNP
GFLGSIGPPGPIGPKGPPGIRGDPGTLQIISLPGSPGPPGSPGEPGMRGEPGPPGPPGNL
GPCGPRGKPGKDGKPGTPGPVGEKGNKGSKGEQGPPGSDGLPGLKGKPGDIGSPATWTTR
GFVFTRHSQTTAIPSCPEGTVPLYSGFSFLYVQGNQRAHGQDLGTLGSCLQRFTTMPFLF
CNINDVCNFASRNDYSYWLSTPALMPMNMAPITGRALEPYISRCTVCEGPAIAIAVHSQT
TDIPPCPHGWISLWKGFSFIMFTSAGSEGAGQALASPGSCLEEFRASPFLECHGRGTCNY
YSNSYSFWLASLNPERMFRKPIPSTVKAGELEKIISRCQVCMKKRQ
NT seq
5001 nt
NT seq
+upstream
nt +downstream
nt
atgagcccccggatggcgctcaggccgcaggtgctcctgctggtgctcctagcgggggca
ggcgcggccggcaagggctgtatctgtaaagacaaaggccagtgcttctgtgagggagcc
aaaggacagaagggggaaaaaggctttcctggaccccctggttctcctggccagaaagga
ttcacaggtcctgaaggcttgcctggactacagggacccaagggctctccaggacttcca
ggactcactggtgccaaaggtgtaaggggaataactggattgccaggattttctggttct
cctggacttccaggcaccccaggcaatactggactgtatggacttgctggtgtaccagga
tgcaatggttctaagggtgagcaggggtttccaggactcccagggacaccaggctaccca
gggatcccgggtcctgctggtttgaaagggcaaaagggtgctcctgctaaaggagacgac
atagaacttgatgcaaaaggggaccccgggttgccaggggctccaggaccacagggtttg
ccaggccctccaggttttcctggccctgttggcccacctggtcctccagggttctttggc
tttccaggagccatgggacctagaggacctaagggtcacatgggtgacagagtgatagga
caaaaaggagagcagggtgtgaaagggttaacaggacccccgggaccaccaggaacagtt
tctgtgaccctcactggcccagataacagaacgaacctcaagggggaaaagggagacaag
ggagtgatgggcaagcctggacctcctggaccctcaggactgcctggagaatcatatgga
tctgaaaagggtgctcctggagaacctggcccacagggaaaacctggaaaagatggtgtt
cctggcttccctggaagtgagggagtcaagggcaacaggggtttccctgggttaacgggt
gaagatggcattaagggacagaaaggggacattggccctccaggatttcgtggtccaaca
gaatattatgacatataccaggaaaagggagataaaggcattccaggcccaccagggccc
aaaggagctcgtggcccacaaggtcccagtggtcccccaggagttcctggaagtcctgga
ccatcaaggcctggcctcagaggagtccctggatggccaggcttgaaaggaagtaaaggg
gaacgaggccccccaggaaaggatgccatggggactcctgggtccccaggatgtcctggt
tcaccaggccctacaggatcaccgggacctccaggaccaccaggtgacatcgtttttcgc
aagggtccacctggagatcgcggactgccaggctatctagggtctccaggaatcctcgga
gctgaaggacccaaaggagaaccaggtctcttgtgcacacagtgcccttatatcccaggg
cctcccggtctcccaggattgccagggttacatggtgtaaaaggaatcccaggaagacaa
ggtgcagctggcttgaaaggaagtccagggtccccaggaaatacaggtcttccaggattt
ccaggattcccaggtgcccagggtgacccaggacttaaaggagaaaaaggtgaaacactt
cagcctaaggggcaagtgggtgccccaggggacccagggctaagagggcaacctgggaga
aagggcttggatggaattcctggaactccgggagtgaaaggattaccaggacctaaaggc
gaactggctctgagtggtgagaagggggaccaaggtcctccaggggatcctggctcccct
gggttcccaggacctgcaggaccagctggaccacctggctatggaccccaaggaaagcct
ggtcccaagggcactcaaggagttcctggagcccctggaccaccaggagaagccggtcct
aggggagaagtcagtgtttcaacaccagttccaggcccaccaggacctccaggggcccct
ggccttgctggcccccaaggtccacctggtatccctggatccatggggaaatatggagat
cctggtcttccagggcctgatggtgaaccaggaattccaggaattggatttcctgggcct
cctggacctaagggagatcaaggtttcccaggtacaaaaggatcactgggttgtcctgga
aaaatgggagagcctgggttacctggaaagccaggcctcccaggagtcaagggagagcca
gcactagccatgcctggaggaccaggaacaccaggttttccaggagaaagaggcaattct
ggggaacatggagaaattggactccctggacttccaggtctccctggaactccaggaaat
gaagggcttgatggaccacgaggagatccagggcagcctggaccacctggagaacaagga
ccccaaggaaggtgcatagagggtccaaggggagcccaaggacttccaggcttaaatgga
ttgaaagggcaacaaggcagaagaggcaaaacagggccaaagggagacccaggaattcca
ggcttggatagatcaggatttcctggagaaactggatcaccaggaaggccaggccatcaa
ggcgaggtgggaccaccaggtcaaaaaggatatccaggaaatccaggaattttagggcca
cgaggtgaagatggaatggttgggatgatgggctttcctggagccactggctctccaggg
ccccctgggaacccaggcatgccagggcagaggggaagccttggaattccaggagtaaag
ggccagagaggaaccccaggagccaagggggaacaaggagataaaggaaatcctgggcct
tctcagatatcccacttaataggggacaaaggagaaccaggtctcaaaggatatgcagga
aatatgggtgagaaaggaaacagaggtgttccagggctgccaggtttaaaaggcctccaa
ggactacctggaccaccaggaccaccaggccccagaggagatttgggcagcattgggaat
cctggagaaccaggaccacgtggtgtgccagggagcatggggaacatgggtatgccaggt
tctaaagggaaaaggggaactttgggattcccaggtcgagctggaagaccaggcctccca
ggtattcacggactccagggagataagggagagccaggttattcagaaggtacaagacca
ggaccaccaggaccaacgggggatccaggactgccaggtgatatgggaaagaaaggagaa
atggggcaacctggcccacctggacattcggggcctgctggacctgagggagtcattgga
agtcctggaagtcctggccttccaggaaagccaggtccgcatggtgatttgggttttaaa
ggaatcaaaggcttcccgggccctccaggaatcaaaggccctccaggtcttccaggattc
ccaggatctcctggaccaataggtataagaggtgaccaaggacgtgatggaattcctggt
ccagccggagaaaagggagaaacaggtttattgggggctcctccaggcccaagagggagc
cctggtgctccaggagccaaaggagacagaggagccccaggtttgcctggcctccctggc
agaaaaggagccatgggagatgccgggcctcgagggcccacaggcatcgaaggattccca
gggccaccaggtctgccgggtgcaatcatccctagccagaaaggaaaccgcggtccgcca
ggctcaagaggaagcccaggtgagcccggtccccctggacctccagggagtcacgtaaaa
ggcataaaaggagacaaagggtctatgggccaccccggcccgaaaggtccacctggaact
gtaggagacatgggaccaccaggtcatccgggagcaccaggtactccaggtcttccaggc
ctcagaggtgatcccggatttcaggggtttccgggtgtgaaaggagaaaagggtaatcct
ggatttctaggatccattggacctccaggaccaattgggccaaaaggaccacctggtata
cgtggagaccctggcacccttcagattatctcccttccaggaagcccagggccacctggc
tcacctggagaaccagggatgcgaggagaacctgggccaccagggccacctggaaaccta
ggaccctgtgggccaagaggtaaaccaggcaaggatggaaaaccaggaactcctggacca
gttggagaaaaaggcaacaaaggttctaaaggagagcaaggaccacctggatcagacgga
ttacccggtttgaagggaaaacctggagacattggatcacctgcaacctggacgacgaga
ggctttgtcttcacccgacacagtcaaaccacagcaattccttcatgtccagaagggaca
gtgccactctacagtgggttttcttttctttatgtacaaggaaatcaacgagcccacgga
caagaccttggaactcttggcagctgcctgcagcgatttaccacaatgccattcttattc
tgcaatatcaatgatgtatgtaatttcgcctctcgaaatgattattcatactggctgtca
acaccagctctgatgccaatgaacatggctcccattactggcagggcccttgagccttat
ataagcagatgcactgtctgtgaaggtcctgcgatcgccatagctgttcacagtcaaacc
actgacattcctccatgtcctcatggctggatttctctctggaaaggattttctttcatc
atgttcacaagtgcaggttctgagggcgctgggcaagcactggcctcccctggctcctgc
ctggaagaattccgagccagcccatttctcgaatgtcatggaagaggaacatgcaactac
tattcaaattcctacagtttctggctggcttcattaaacccagaaagaatgttcagaaag
cctattccatcaactgtgaaagctggagaattagaaaaaataataagtcgctgtcaggtg
tgcatgaagaaaagacaatga
DBGET
integrated database retrieval system
