Cebus imitator (Panamanian white-faced capuchin): 108309812
Help
Entry
108309812 CDS
T08783
Symbol
PCDH15
Name
(RefSeq) protocadherin-15 isoform X3
KO
K16500
protocadherin-15
Organism
cimi
Cebus imitator (Panamanian white-faced capuchin)
Brite
KEGG Orthology (KO) [BR:
cimi00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
cimi03037
]
108309812 (PCDH15)
04515 Cell adhesion molecules [BR:
cimi04515
]
108309812 (PCDH15)
Cilium and associated proteins [BR:
cimi03037
]
Primary cilia and associated proteins
USH complex and associated proteins
108309812 (PCDH15)
Cell adhesion molecules [BR:
cimi04515
]
Cadherins
Protocadherins
108309812 (PCDH15)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cadherin
ECD
CshA_repeat
LMBR1
Motif
Other DBs
NCBI-GeneID:
108309812
NCBI-ProteinID:
XP_017391842
Ensembl:
ENSCCAG00000031137
LinkDB
All DBs
Position
Unknown
AA seq
1953 aa
AA seq
DB search
MFQPFCLWKCLASGIVLGTLFEICLGQYDDDCKLARGGPPATIVAIDEESRNGTILVDNM
LIKGTAGGPDPTIELSLKDNVDYWVLMDPVKQMLFLNSTGRVLDRDPPMNIHSIVVQVQC
INKKVGTIIYHEVRIVVRDRNDNSPTFKHESYYATVNELTPVGTTIFTGFSGDNGATDID
DGPNGQIEYVIQYNPDDPTSNDTFEIPLMLTGNVVLRKRLNYEDKTRYFVIIQANDRAQN
LNERRTTTTTLTVDVLDGDDLGPVFLPCVLVPNTRDCRPLTYQAAIPELRAPEELNPITV
TPLIEAIDQDRNIQPPSDRPGILYSILVGTPEDYPRFFHMHPRTAELSLLEPVNRDFHQK
FDLVIKAEQDNGHPLPAFASLHIEILDENNQSPYFTMPSYQGYILESAPVGATISDSLNL
TSPLRIVALDKDIEDMKDPELHLFLNDYTSVFTVTQTGITRYLTLLQPVDREEQQTYTFS
ITAFDGVQESQPVIVNIQVMDANDNTPTFPEISYDVYVYTDMRPGDSVIQLTAVDADEGS
NGEITYEILVGAQGDFIINKTTGLITIAPGVEMIVGRTYALTVQASDNAPPAERRHSICT
VYIEVLPPNNQSPPRFPQLMYSLEISEAMRVGAVLLNLQATDREGDSITYAIENGDPQRV
FNLSETTGILTLGKALDRESTDRYILIITASDGRPDGTSTATVNVVVTDVNDNAPVFDPY
LPRNLSVVEEEANAFVGQVKATDPDAGINGQVHYSLANFNNLFRITSNGSIYTAVKLNRE
VRDYYELVVVATDGALHPRHSTITLAIKVLDIDDNSPVFTNATYTVLVEENLPAGTTFLQ
IEAKDVDLGANVSYRIRSPEVKHLFALHPFTGELSLLRSLDYEAFPDQEASITFLVEAFD
IYGTMPPGIATVTVIVKDMNDYPPVFSKRIYKGMVAPDAVKGTPITTVYAEDADPPGLPA
SRVRYRVDDVQFPYPASIFDVEEDSGRVITRVNLNEEPTTIFKLVVVAFDDGEPMMSSSA
TVKILVLHPGEIPRFTQEEYRPPPVSELATKGTVVGVISAAAINQSIVYSIVSGNEEDKF
GMNNITGVIYVNGPLDYETRTSYVLRVQADSLEVVLANLRVPSKSNTAKVYIEIQDENNN
PPVFQKKFYIGGVSEDARMFTSVLRVKATDKDTGNYSVMAYRLIIPPIKEGKEGFVVETY
TGLIKTAMLFHNMRRSYFKFQVIATDNYGKGLSGKADVLVSVVNQLDMQVIVSNVPPTLV
EKKIEDLTEILDRYVQEQIPGAKVVVESIGARRHGDAFSLEDYTKCDLTVYAIDPQTNRA
IDRNELFKFLDGKLLDINKDFQPYYGEGGRILEIRTPEAVTSIKKRGESLGYTEGALLAL
AFIIILCCIPAILVVLVSYRQFKVRQAECTKTARIQAALPATKPAAPAPAPVAAPPPPPP
PPPGAHLYEELGDSSMHNLFLLYHFQQSRGNNSVSEDRKHQQVVMPFSSNTIEAHKSAHV
DGSLKSNKLKSARKFTFLSDEDALSAHNPLYKENISQVSTDPDNSLRTDFVDPFLPRIQA
KSKSLRGPREKIQRLWSQSVSLPRRLRRKVPNRPEVINLQQWQGTRQKAENENIGICTIK
RGSSNRLLTTEEANLTEKEEIRQGETLIIKGTEQLKSLASDSSFCFPRPHFSFSTLPTVS
RTVELKSEPNVITSPAECTLELSPSRPCVLNSSLSRRETPICMLAVETERNIFEKFSHPP
NISPSSACLPPPLPISPPPPPPAPAPLAPPPDIPPFSLSCPPPSVPLPLPPPSLFPPSIP
LSGPQTPPLLPPFPTLPPPPPSIPCPPPPSASFLSTECVCITGIKCMNNTMPAEEIKSSM
TQLSTTTVCKTDPQREPKGILKRVKNLADLEKSVANMYSQIEKNYLRTNVSELQTMCPSE
ITNMEITAEQNPENLNNIVEGTENQSHSQSTSL
NT seq
5862 nt
NT seq
+upstream
nt +downstream
nt
atgtttcaaccgttttgtctctggaagtgtttagcttcaggaatcgtcctgggtactctc
tttgaaatctgcttgggccagtacgacgatgattgcaaactagctaggggaggaccacca
gctaccatagttgctattgatgaagagagtcggaatggtacaattctggtggacaacatg
ctgatcaaagggactgctggaggaccagaccccaccatagaactttctttaaaggacaat
gtggattactgggtgttaatggatcctgttaagcaaatgcttttcctgaacagcactggc
agagttctggatagagatccaccgatgaacatacactccattgtggtgcaggtccagtgc
atcaacaaaaaagtgggcactattatctaccatgaggtgcgaatagtggtaagagacagg
aatgacaactcgcccactttcaagcatgaaagctactatgccacagtaaacgagctcact
ccagttggtaccacgatattcacaggattttcaggggacaatggagctacagatatagat
gatggaccaaatggacagatagagtatgttattcagtataatccagatgatccgacatcc
aatgacacctttgaaattcccctaatgttgactggaaatgtagtgttacggaagaggctc
aactatgaagataagactcgctactttgtcataatccaagctaatgaccgcgcccaaaat
ttgaacgagaggcgaaccaccaccaccactctcacagtggatgttctggatggagatgac
ttgggtccagtgtttcttccttgtgtccttgtgccaaacactcgtgattgccgtccactc
acttaccaagctgccatacctgagttgagagctccggaagaactgaaccccattactgtt
acaccactgattgaagccattgatcaggaccggaatattcaaccaccatcagataggcca
ggaatcctctattctattcttgtcgggactcctgaggattacccaagatttttccatatg
catcctaggacagcagaacttagtctcctggagccagtaaacagagactttcaccagaaa
tttgatttggtgattaaggctgaacaagacaatggtcatcctcttcctgcctttgccagc
ctacacattgaaatactggatgaaaacaatcaaagcccatattttacaatgcccagttat
caaggctatattctggaatctgccccagtgggagcaaccatttcggacagtctcaatttg
acctctcctttaagaatagtagctctggacaaggacatagaagatatgaaagacccagag
cttcacctttttctgaatgactacacctccgtcttcactgtcacacagactggtattact
cgctacctcaccttacttcaaccagtggacagggaagaacagcaaacttataccttttcg
ataacagcatttgatggtgtacaagaaagtcagccagtcattgtcaatattcaagtgatg
gatgcaaatgataacacgccaaccttcccggaaatatcctatgatgtgtatgtttataca
gacatgagacctggagacagtgtcatacagctcactgcagttgacgcagatgaagggtca
aatggggagatcacatatgaaatccttgttggggctcagggagacttcatcatcaacaaa
acaacagggcttatcaccattgctccgggagtggaaatgatagtcggacgaacttacgca
ctcactgtccaagcatcggataatgctcctcctgcagagagaaggcactccatctgcact
gtgtacattgaagtgcttccaccaaataatcaaagccctcctcgcttcccacagctgatg
tatagccttgaaattagtgaagccatgagggttggtgctgttttattaaatctacaggca
actgatcgagagggagactcaataacatatgccattgagaatggagatcctcagagagtt
tttaatctttcagaaaccacggggattctaaccttagggaaagcactggacagggaaagc
actgatcgctacattctgatcatcacagcttcagatggcaggccagatgggacctcaact
gccacagtaaacgtggtggtgacggatgtcaacgacaatgctccagtgtttgatccttat
ctaccgagaaatttatctgtggtggaggaagaagccaatgcctttgtgggtcaagtaaaa
gcaacggaccctgatgctggaataaatggccaagtgcactacagtttggctaactttaat
aatctttttcgtatcacatccaatgggagcatttacacagcagtgaagcttaacagagaa
gtcagggactactatgaacttgttgttgtggcaacagatggagcactgcaccctcgtcat
tcaacaataacattggccatcaaggttttggacattgatgataatagtcctgtgttcacc
aatgcaacatacactgtccttgttgaagagaatctgccagctgggaccaccttccttcaa
atagaggccaaggatgtcgacctcggagcaaatgtgtcttaccggataagaagcccagaa
gtgaagcacctttttgcactacatccatttacaggagaattatcccttttaaggagttta
gattatgaggcatttccagaccaggaagcaagcatcacttttctggtagaggcctttgat
atttatggaacaatgccacctggtattgcaactgtcacagtgattgtaaaggatatgaat
gattatcctcctgtatttagtaaaagaatatacaaagggatggtggctccagatgcagtc
aagggtacacctatcacaacagtttatgccgaggatgcagaccctcctggattacctgca
agtcgtgtgaggtatagagtagatgatgttcagtttccttatcctgccagtatttttgat
gtggaagaagattctggaagagtaataacacgagtcaatcttaatgaagaacctacaaca
atctttaagttggtggtggttgcttttgatgatggggagcctatgatgtccagcagcgcc
acagtgaagattcttgtcttacatcctggtgagatcccacgcttcacacaggaggaatat
agacctcctccagtaagtgaacttgccaccaaagggactgtggttggtgtcatttctgct
gctgccattaatcaaagtattgtatactccattgtttcaggaaatgaagaagataaattt
ggaatgaataacatcacaggtgttatctatgtgaatgggcctctggattacgagactagg
acgagctatgtacttcgagtccaagctgattccctggaagtggtccttgccaatctccga
gttccttcgaaaagcaatacagctaaagtgtacattgagattcaggatgaaaataataat
cccccagtgtttcagaaaaaattctacatcggaggtgtatctgaagatgcgagaatgttt
acttctgtactcagagtgaaggctactgataaagatactggcaattatagtgtcatggcc
tacagactcataataccaccaattaaagagggaaaagaaggatttgtagtggaaacatac
acagggcttatcaaaactgcgatgctcttccataatatgaggagatcctacttcaagttt
caagtgattgcaactgacaactatgggaagggactaagcggcaaagctgatgtacttgtg
tctgtggtcaatcagctggatatgcaagtcattgtctccaacgtgcctcctactctagtg
gaaaaaaagatagaagatcttacagagatcttggatcgctatgttcaggaacagattcct
ggtgccaaggttgtagtagagtccattggagctcgccggcatggggatgccttttcccta
gaagattataccaaatgtgacttgactgtctatgctatcgacccccaaaccaacagagcc
atcgacagaaatgagcttttcaaatttttggatggcaaactgcttgatatcaataaagac
tttcagccatattatggggaaggaggacgcattctggagatccggactccagaggcagtg
accagcattaaaaagagaggagagagtctaggatatacagaaggggccttgctggctctg
gccttcatcatcatcctctgctgcattcctgccatcttggtggttttggtcagctacaga
cagtttaaagtacgtcaagctgagtgcacaaagactgcaaggattcaggccgcattaccg
gcgactaaaccagcagcaccggcccctgcaccagtggcagcgcccccgcccccgccgccg
cctccgccgggtgcgcatctctacgaagaacttggagacagctcaatgcataatcttttc
cttctctaccattttcaacaaagcaggggaaataactcagtctcagaagacaggaagcat
caacaagttgtgatgcccttttcttccaatactattgaggctcacaagtcagctcatgta
gacggatcacttaagagcaacaaactgaagtctgcaagaaaattcacatttctctctgat
gaggatgccttaagtgcccataatcccctttataaggaaaacataagtcaagtatcaaca
gatccagacaattcactgagaacagattttgtagacccatttttacccagaatacaagcc
aagagtaagtctctgaggggcccaagagaaaagattcagaggctgtggagtcagtcagtc
agcttacccaggaggctgaggaggaaagttccaaatagaccagaggtcataaatcttcag
cagtggcaaggcaccaggcagaaagctgaaaatgaaaacattggaatctgtacaatcaaa
agaggtagcagcaatcgattgcttacaactgaagaggcaaatttgacagagaaagaggaa
ataaggcaaggtgaaacactgattataaaaggaacagaacagttgaaatctctcgcttca
gactcttcattttgctttcccaggcctcacttctcattctccactttgccaactgtttca
agaactgtggaactcaaatcagaacctaatgtcatcacttctcctgctgaatgtaccttg
gaactttctccttcaaggccctgtgttttaaattcctcactctctaggagagagacgcct
atttgtatgttagctgttgaaactgaaagaaatatttttgaaaaattttcccatccacca
aacatctccccttcttctgcctgtctccctcctcctcttcctatttctcctcctcctcct
cctcctgctcctgctcctcttgctcctcctcctgacattcctcctttttctctttcttgt
cctcctccttctgtccctcttcctcttcctcctccttcactttttccaccttctattcct
ctttctggtccccaaactccacctcttctacctccatttccaactcttcctccaccacct
ccttctattccttgcccaccacctccttcagcttcatttctgtctacagagtgtgtctgt
ataacaggtattaaatgcatgaacaacacgatgcctgccgaggaaattaagtcctctatg
acacagctatcaacaacaacagtgtgtaaaacagaccctcagagagaaccaaaaggcatc
ctcaaacgtgttaaaaacttagcagaccttgaaaaatcagtagctaacatgtacagtcaa
atagaaaaaaactatctacgcacaaatgtttcagaacttcaaactatgtgcccttcagaa
ataacaaatatggaaatcacagctgaacaaaacccggagaatttgaacaatattgtcgag
ggaactgaaaaccaatctcacagtcaatctacttcactgtaa
DBGET
integrated database retrieval system
