Ciona intestinalis (yellow sea squirt): 100169919
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Entry
100169919 CDS
T01056
Symbol
zf(bbox/ring)-6
Name
(RefSeq) zinc finger protein ZF(Bbox/RING)-6
KO
K10654
tripartite motif-containing protein 55
Organism
cin
Ciona intestinalis (yellow sea squirt)
Pathway
cin04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
cin00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
100169919 (zf(bbox/ring)-6)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
cin04121
]
100169919 (zf(bbox/ring)-6)
Ubiquitin system [BR:
cin04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
100169919 (zf(bbox/ring)-6)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_UBOX
zf-RING_2
zf-C3HC4
zf-B_box
zf-RING_5
zf-C3HC4_3
zf-C3HC4_4
zf-C3HC4_2
zf-RING_6
Sina_RING
OTT_1508_deam
Motif
Other DBs
NCBI-GeneID:
100169919
NCBI-ProteinID:
NP_001122372
Ensembl:
ENSCING00000000079
UniProt:
Q1RLB1
LinkDB
All DBs
AA seq
431 aa
AA seq
DB search
MDALRLMGGAAGPNPEEIERLLMCPICLEIYTKPVVILPCQHNLCRKCANDVFQNRGTPM
GSGGRFRCPTCRYEVVLDRHGVYGLQRNLLVENIIDMYQTEGRKPTFKTSEVVMCDQHEE
EKVNIYCVTCQKPTCSLCKVFGDHQTCNVSPMEKIYKEQKSEISDSIALLVAGNDRLQAI
ISQTEELGKMAECNGRKVKSDLCAAFDKLYAVLEQRKTDMMNRITSDVQERSQVIKEMLK
SYGLQLESASKLMEASLALVEERSVPVFLTQARETINKIKATSRDSEVRKPPFKIQDMDE
FTVDFNNHETALYKLDFSALQVCDATTNDNNETNDDETANQSEGATSNTADNDDDSEEEY
DVTVEDDVGDSDATSVTSRSDVGSSYSGARSNNEATGRSQSPSSSRNNGSSSGATESSEA
RRPLEERSSWW
NT seq
1296 nt
NT seq
+upstream
nt +downstream
nt
atggatgcgcttcgtttgatgggaggggcggctgggccgaatcccgaagaaattgaacgg
cttctgatgtgtccaatatgtcttgaaatctacaccaagcccgttgttattctcccctgc
cagcataacttgtgcaggaaatgcgccaacgatgtgtttcagaacaggggaactcccatg
gggtcgggcgggagattcaggtgtcctacgtgtcgttacgaagttgtattggaccgacat
ggagtctacggcttgcagagaaacctacttgttgagaatattattgacatgtatcaaaca
gaagggagaaaaccaactttcaaaacttcagaggttgtaatgtgcgaccaacatgaagaa
gagaaagtgaatatttactgcgtgacttgtcagaaaccaacgtgttctctgtgcaaagta
tttggggaccatcagacgtgtaatgtctcgcctatggagaaaatatacaaggaacaaaag
agtgaaatatctgactctatagcactcctagtggcaggaaatgatcgtcttcaagcaatt
atttcacaaacagaagagcttggaaaaatggccgaatgtaacggtcgtaaagtgaaaagt
gatttatgcgctgcgtttgacaaactttacgccgtgttggagcaacgtaagactgatatg
atgaatcgaataacttctgatgttcaagaaagaagtcaggttataaaagaaatgttaaaa
tcttacggtcttcaacttgagtcagcaagcaagttaatggaagcttcacttgcgttggtt
gaggaacgaagcgttcctgtgtttcttacacaagcgagggagacaattaataaaatcaaa
gccacaagtcgagactccgaggtcaggaagcctccgtttaaaatacaagacatggacgag
ttcaccgttgatttcaacaatcacgaaactgcgctttataaacttgacttctcagctttg
caggtttgtgacgcaacaacgaacgataataacgaaacaaacgatgatgaaaccgccaac
caatcagaaggcgccacatcaaacacagctgacaacgatgacgattcagaagaggagtat
gacgtcacagtggaagatgacgtgggcgattctgacgcaacatctgtgacgtcacgaagt
gacgtaggcagcagctacagcggagcaagatctaacaatgaagcaaccggtcgcagccaa
tcaccttcaagctcacgtaacaacggttcgtcaagtggcgccacagagtcgagtgaagca
agacggccactagaggagagaagcagttggtggtaa
DBGET
integrated database retrieval system
