Ciona intestinalis (yellow sea squirt): 100170059
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Entry
100170059 CDS
T01056
Symbol
zf(cchc/c2h2)-1
Name
(RefSeq) terminal uridylyltransferase 4 isoform X1
KO
K13291
terminal uridylyltransferase [EC:
2.7.7.52
]
Organism
cin
Ciona intestinalis (yellow sea squirt)
Brite
KEGG Orthology (KO) [BR:
cin00001
]
09190 Not Included in Pathway or Brite
09191 Unclassified: metabolism
99980 Enzymes with EC numbers
100170059 (zf(cchc/c2h2)-1)
Enzymes [BR:
cin01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.52 RNA uridylyltransferase
100170059 (zf(cchc/c2h2)-1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TUTase
PAP_assoc
zf-CCHC
zf-CCHC_2
NTP_transf_2
Polbeta
zf-CCHC_4
zf-C2H2_2
PAP_NTPase
Motif
Other DBs
NCBI-GeneID:
100170059
NCBI-ProteinID:
XP_009858669
Ensembl:
ENSCING00000008136
LinkDB
All DBs
Position
5:3882330..3901878
Genome browser
AA seq
1448 aa
AA seq
DB search
MQPSQVNSEHSSLNSGAPRGKLTQAAKFQTKSSSPSSTKQTTPKCSNGGKNKSMETSGSG
KKADSMNGKWHVPKPGVGSVTCNLEEHLEATSNGRVYDKPNVAHEEANRNGKMNAAYDNV
KMNQQNQNPVNGKNKMIQHNETTKTVNTVHKEADDAKPTELGISAKIKKKRNKKKRDKLP
ATSPDPLIQAGNEILKLVNSGVNKNQNTPPTPSVDCSETPKIHQKKVVPSTPTISPGMEK
LGLKQAEARLSRDYIFTLEKKSEDFPHAKFVCKLCNYHLDNVPLAHKHIKEKRHQKALKE
RQQDNILRELSLPSPPAINNLQKVLLTEVVAEVMSESDVQLRTNTVQDLEQLISTHIPKS
RVVLYGSSCSGFGFTSSDVNVDLQYPSTMRAPAALLKVLSLLQDSETYQDVNADFLGKNP
RINFTDQKSSLNISLSTGNESSILTSRLLRFYSLLDPRVIQLSMVFRKWAKMCRLDLQSE
GSLPSHAFIIMTIFFMQRHKYIPALHEIIADHDMTSILNHSSISKCELLDFTSGSCHYTA
TLPPKQPSSPVKKPTPTEEDETDSDAETNTTLENCISESPDSNIELDSPLSGAQEPVKPS
PIQPNNPVNLMGGLEGKQLLVADLWLAMIKFFALEYPMEDQIICICTSRTLLRSDKNWSR
KRVAIVDPFSSKRNLCRSMTQQAVFGYMMSRLKAAVTYFYASRAQNDTPQVSCGNHDVND
NTPSTSNGGTGIEEQLDEVVPKICDMAIHSVLDEVAEDTTRYEFTNKVITGGHYPVKVCV
LCKNEGHVRKDCPDEAKVMDLVELPPITKSLLNALDRVCNYMYENFALRQKEVQERNKIC
EALMNYIQRKYNFKCQMNLFGSSRNGFGFRRSDLDICMTFYGNATGEDLDFVSIITDVAK
CLRRNSDLCNILPITTAKVPIVKFEHKMSGLEGDISLYNLLAQKNTAMLSCYSSIDCRCK
VLGYAMKVFVKRCQIGDASRGSLSSYAYTLMVIFYLQQRKPPVLPVLQQLYEGSEQPVDT
IDGWNAWFNSDVKALKDIWPEFGKNKESIGELWHNMLRFYTEEFDFRHHVVCIRKHEPLT
VFEKEWTSKFISIEDPFDLNHNLGAGVSRKMSNFIMRVFVKARQHFANLPPKNMDPIHEP
EYFFDANILMDGEEAPNDRCCRVCGKIGHFVRDCPRKKRRRGQDNGQQEVKDMNEYRCFL
CGEFGHIKKDCPEYNNDSNFTGQNKFFRGSSPRNSDFQQRNFQSPKYKMSPHQNNKRNNS
HTPGSRDTRRSSPPPHPSHRSNETRAKMNLFPPPAQERSIESSPRFVQSSPKQIPDKRRT
PNKQWPSSPHTQQSPVYHQPPSASTQGYHGSPYNVIPYNNGVYGGSPYNTGMPDHGKDPH
RDQMGNGTQYLNNPAMVQGRNRNMAYSPMHPLLSPMMNDGQQMSPGSRTPMGSSPHKQQR
HHNRRNQK
NT seq
4347 nt
NT seq
+upstream
nt +downstream
nt
atgcaaccatcacaagtcaacagtgaacacagttctctaaattcgggtgctcctcgtggg
aaactaacccaagcagcaaaattccaaaccaaaagtagttcaccatcttctaccaagcaa
actactccgaaatgctcaaacgggggaaaaaacaaatcaatggagacttctggtagtgga
aagaaagcggatagtatgaatggtaaatggcatgtccctaaacctggggttggcagtgtg
acttgtaacttggaagaacatctagaagcaacgagtaatggcagggtatatgataaacct
aatgtggctcatgaagaagctaatagaaatggaaagatgaatgcagcatatgacaatgtt
aaaatgaatcaacaaaatcaaaatccagtaaatgggaaaaacaaaatgattcagcataat
gaaactactaagacagtgaacacagtacacaaagaagcagatgatgctaaaccaacagaa
ctgggtatcagtgccaaaatcaagaaaaaaagaaataagaaaaagcgtgacaagctacca
gctacaagtccagacccgctaattcaagcaggtaatgagattctgaaactagtgaacagt
ggtgtaaataagaaccaaaacactccaccaactccaagtgtggattgctctgaaacacca
aaaatccatcagaagaaagtggttccatctacacccaccatttcccctggtatggaaaaa
cttggtttgaaacaagcagaagctcggcttagtagagattatatatttacactggaaaag
aaatctgaagactttccccatgcaaagtttgtatgtaaactgtgcaactatcaccttgat
aatgtacctcttgcacacaagcacattaaggagaaaaggcatcagaaggcactgaaggaa
agacagcaggacaacatattacgtgagctctcccttccttccccccctgccatcaacaac
ctacagaaggtcttacttactgaggtagtagctgaagtaatgagtgaaagtgacgtacaa
ctacgcactaacacagtgcaagaccttgaacaacttatcagcactcatataccaaagtca
cgtgttgtgttatatggttcatcatgcagtgggtttggttttacatcaagtgatgtgaat
gttgatctacaatacccatccaccatgcgtgctcctgctgccttgcttaaagttctttca
cttcttcaagattcagagacttaccaagatgtgaatgcggattttctcggaaagaatcct
cggattaatttcacggatcaaaaatcatcacttaacatctctttaagcacggggaacgaa
tcgagcatcctgacaagtcgtctgctacgtttctactccctgcttgaccccagagtaatt
cagttaagcatggtgtttcgtaaatgggcaaaaatgtgtcgacttgatctacaaagtgag
ggttccctaccatcccatgcattcatcattatgaccatcttcttcatgcaaaggcacaaa
tatataccagctctacatgagataattgctgaccacgacatgacatccatattgaaccat
tcttccatttctaaatgtgagttgctggactttacaagtggttcatgtcattacacggca
actttaccacctaaacaaccaagcagtcctgtaaagaagccgacccctactgaagaggat
gaaactgactcggacgctgaaacaaacacgacactcgagaattgcatatctgaatctcca
gatagcaatattgagcttgattcgccactatcaggcgctcaagagcccgtcaagccgtcc
cccatacaacccaacaaccctgttaaccttatgggagggttagagggaaaacaattgctt
gttgctgatttgtggttggccatgataaagttctttgcattggagtatcctatggaagac
cagatcatatgcatctgcacaagtcgaaccctgcttagatcagataagaattggagcaga
aaaagggttgcaattgttgatcctttctcttccaagagaaatctatgtcgttctatgact
caacaggcagtgtttgggtacatgatgtcccggttaaaagcagccgtgacttacttctat
gcttcacgtgcacaaaatgatacaccgcaagtatcatgtggcaatcatgatgtgaatgat
aacactccatctactagtaatggtggtacaggtatagaggaacaactggatgaagttgtt
ccaaaaatttgtgacatggcaatccactctgtgcttgacgaagttgctgaggatactaca
aggtatgagtttactaataaagtgataactggtggacactaccccgtcaaagtttgtgtc
ctgtgcaagaatgaggggcatgttcgcaaggattgtcccgatgaagctaaagttatggac
cttgtggaactaccacctataaccaagtctctactaaatgcactggatcgtgtatgcaac
tatatgtatgaaaacttcgcattgaggcagaaggaagtccaggaaagaaacaaaatatgt
gaagcacttatgaattacatacaacgcaaatacaacttcaaatgtcagatgaatttattc
ggttcttcaagaaatggttttggttttcgtcgtagtgaccttgatatttgtatgactttc
tatgggaatgctacaggagaggatttagacttcgtgtccatcatcactgatgttgcgaag
tgtcttcgtaggaattccgatctttgcaacatcctcccaatcaccacagctaaagtcccg
atcgtaaagttcgagcacaagatgagtggcttggagggagacataagtttatacaactta
ctggcacaaaagaacacagctatgttatcctgttattcttccattgattgtcgatgcaag
gtgctcgggtatgccatgaaagttttcgtgaagcggtgtcagattggtgatgcttcacga
ggctcattatcatcatatgcatacacactcatggtcatattctatctgcaacagaggaaa
cctccagtgctgccagttttacaacagttatacgaaggtagtgaacaacctgtagataca
atagatggttggaatgcctggttcaacagtgatgtcaaagctttgaaagatatctggccc
gagtttggcaagaacaaggaatccatcggcgagctgtggcacaatatgcttcgcttctat
acagaggagtttgacttcagacaccatgttgtgtgtataagaaagcatgaaccattgact
gtgtttgaaaaggaatggacttccaagtttatttcaattgaagatccgtttgatttgaac
cataaccttggtgctggtgtatcgcgcaagatgagcaactttatcatgcgtgtgtttgtg
aaagcaaggcaacactttgccaacttaccaccgaaaaatatggatcctattcatgaacct
gaatatttcttcgatgccaacatcctcatggatggagaggaagctcccaatgaccgatgt
tgcagagtttgtgggaagatcggacactttgtacgagactgtcccaggaagaaaagaaga
agaggacaagataatgggcaacaagaagtaaaggatatgaatgaatacagatgtttctta
tgtggagaatttggacatattaagaaagattgcccagagtataacaatgatagtaacttc
acaggacaaaacaaatttttccgtggttcttcaccaagaaactctgactttcaacaaagg
aactttcaatctcccaaatacaagatgtctcctcaccagaataataagaggaacaattcc
catacacctggtagcagagacacaagaagaagtagccccccaccccaccccagccatcga
tcaaatgaaactcgtgcaaagatgaatctatttccacctcctgctcaggaaagatcgatc
gagagcagtccacgtttcgtgcaatcatcaccaaagcaaattcctgataagaggcggaca
ccaaacaaacagtggccttcctccccccacacccagcaatctcctgtataccaccaacca
ccatctgcatctacacaaggttaccatggatctccatacaatgtgattccttataataat
ggagtgtatggtggatcgccatacaatactgggatgcctgatcatggtaaagatcctcac
cgtgaccagatgggcaatggaacacaatatctcaacaacccggcaatggtgcagggcaga
aaccgtaacatggcatacagtcctatgcaccctctactatcgccgatgatgaacgacggt
cagcagatgtcgcccggcagccgtaccccaatggggagctctccccacaagcagcaaagg
caccataaccgtcgcaaccagaaataa
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